Guide to the Human Genome
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Name: ACCN1 Sequence: fasta or formatted (563aa) NCBI GI: 34452695
Description:

amiloride-sensitive cation channel 1, neuronal isoform 1

Referenced in:

Sodium Channels

Other entries for this name:
alt prot [512aa] amiloride-sensitive cation channel 1, neuronal isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         40           3
 C cysteine            3.2         18           1
 D aspartate           3.4         19           1
 E glutamate           8.0         45           2
 F phenylalanine       5.0         28           2
 G glycine             9.1         51           3
 H histidine           2.5         14           1
 I isoleucine          4.1         23           1
 K lysine              4.3         24           2
 L leucine            11.9         67           3
 M methionine          2.3         13           1
 N asparagine          3.4         19           3
 P proline             6.2         35           3
 Q glutamine           3.2         18           2
 R arginine            6.6         37           2
 S serine              6.0         34           2
 T threonine           5.5         31           2
 V valine              3.7         21           1
 W tryptophan          1.4          8           1
 Y tyrosine            3.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 1, neuronal isofo... 
ACCN1                 0.662   amiloride-sensitive cation channel 1, neuronal isofor...
ACCN2                 0.503   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN2                 0.484   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN3                 0.392   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.392   amiloride-sensitive cation channel 3 isoform b 
ACCN3                 0.392   amiloride-sensitive cation channel 3 isoform c 
ACCN4                 0.344   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN4                 0.321   amiloride-sensitive cation channel 4 isoform 2 [Homo...
ACCN5                 0.155   amiloride-sensitive cation channel 5, intestinal [Ho...
SCNN1B                0.113   sodium channel, nonvoltage-gated 1, beta 
SCNN1A                0.109   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.109   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.109   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1G                0.082   sodium channel, nonvoltage-gated 1, gamma 
SCNN1D                0.079   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.079   sodium channel, nonvoltage-gated 1, delta isoform 1...
LOC100130663          0.010   PREDICTED: hypothetical protein 
LOC100130663          0.010   PREDICTED: hypothetical protein 
LOC100130663          0.010   PREDICTED: hypothetical protein 
LOC100291588          0.009   PREDICTED: hypothetical protein XP_002345935 
LOC100290285          0.009   PREDICTED: hypothetical protein XP_002346836 
LOC100287767          0.009   PREDICTED: hypothetical protein XP_002342668 
C2orf29               0.009   hypothetical protein LOC55571 
LOC100292082          0.008   PREDICTED: hypothetical protein XP_002345881 
LOC728767             0.008   PREDICTED: hypothetical protein 
LOC728767             0.008   PREDICTED: hypothetical protein 
LOC100292058          0.007   PREDICTED: hypothetical protein XP_002344766 
LOC100293005          0.007   PREDICTED: hypothetical protein 
LOC100290367          0.007   PREDICTED: hypothetical protein XP_002347417 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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