Guide to the Human Genome
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Name: GNAI1 Sequence: fasta or formatted (354aa) NCBI GI: 33946324
Description:

guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         31           3
 C cysteine            2.8         10           1
 D aspartate           7.3         26           2
 E glutamate           7.9         28           3
 F phenylalanine       5.4         19           1
 G glycine             5.1         18           2
 H histidine           1.7          6           1
 I isoleucine          7.3         26           2
 K lysine              8.5         30           2
 L leucine             7.6         27           4
 M methionine          2.5          9           1
 N asparagine          4.2         15           2
 P proline             1.1          4           1
 Q glutamine           3.7         13           2
 R arginine            5.1         18           1
 S serine              5.1         18           1
 T threonine           5.9         21           2
 V valine              5.4         19           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), alph... 
GNAI3                 0.949   guanine nucleotide binding protein (G protein), alpha...
GNAI2                 0.884   guanine nucleotide binding protein (G protein), alpha...
GNAO1                 0.718   guanine nucleotide binding protein, alpha activatin...
GNAO1                 0.713   guanine nucleotide binding protein, alpha activating...
GNAT3                 0.709   guanine nucleotide binding protein, alpha transduci...
GNAT2                 0.705   guanine nucleotide binding protein, alpha transducin...
GNAT1                 0.693   rod-type transducin alpha subunit 
GNAT1                 0.693   rod-type transducin alpha subunit 
GNAZ                  0.665   guanine nucleotide binding protein, alpha z polypepti...
GNA14                 0.473   G alpha 14 
GNAQ                  0.469   guanine nucleotide binding protein (G protein), q po...
GNA11                 0.453   guanine nucleotide binding protein (G protein), alp...
GNA15                 0.374   guanine nucleotide binding protein (G protein), alp...
GNA12                 0.358   guanine nucleotide binding protein (G protein) alpha...
GNA13                 0.358   guanine nucleotide binding protein (G protein), alph...
GNAL                  0.345   guanine nucleotide binding protein (G protein), alph...
GNAL                  0.341   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.341   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.339   GNAS complex locus isoform g 
GNAS                  0.336   GNAS complex locus GNASS 
GNAS                  0.328   GNAS complex locus GNASL 
GNAS                  0.326   GNAS complex locus XLas 
GNAS                  0.326   GNAS complex locus isoform f 
ARF6                  0.045   ADP-ribosylation factor 6 
ARF1                  0.036   ADP-ribosylation factor 1 
ARF1                  0.036   ADP-ribosylation factor 1 
ARF1                  0.036   ADP-ribosylation factor 1 
ARF1                  0.036   ADP-ribosylation factor 1 
ARF3                  0.036   ADP-ribosylation factor 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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