Guide to the Human Genome
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Name: GPR55 Sequence: fasta or formatted (319aa) NCBI GI: 33695107
Description:

G protein-coupled receptor 55

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         13           2
 C cysteine            4.7         15           2
 D aspartate           3.4         11           2
 E glutamate           1.9          6           1
 F phenylalanine      10.0         32           2
 G glycine             4.4         14           1
 H histidine           2.8          9           1
 I isoleucine          6.9         22           1
 K lysine              3.1         10           1
 L leucine            12.5         40           3
 M methionine          3.8         12           1
 N asparagine          3.1         10           1
 P proline             3.8         12           1
 Q glutamine           4.1         13           2
 R arginine            4.7         15           2
 S serine              9.1         29           1
 T threonine           4.1         13           2
 V valine              8.8         28           2
 W tryptophan          1.6          5           1
 Y tyrosine            3.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 55 
LPAR4                 0.190   lysophosphatidic acid receptor 4 
GPR35                 0.186   G protein-coupled receptor 35 
LPAR6                 0.183   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.183   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.183   G-protein coupled purinergic receptor P2Y5 
LPAR5                 0.165   lysophosphatidic acid receptor 5 
LPAR5                 0.165   lysophosphatidic acid receptor 5 
GPR174                0.141   putative purinergic receptor FKSG79 
CCR4                  0.135   chemokine (C-C motif) receptor 4 
GPR183                0.130   EBV-induced G protein-coupled receptor 2 
CCR8                  0.127   chemokine (C-C motif) receptor 8 
AGTR2                 0.119   angiotensin II receptor, type 2 
CX3CR1                0.117   chemokine (C-X3-C motif) receptor 1 
P2RY10                0.117   G-protein coupled purinergic receptor P2Y10 
P2RY10                0.117   G-protein coupled purinergic receptor P2Y10 
F2R                   0.114   coagulation factor II receptor precursor 
CCBP2                 0.113   chemokine binding protein 2 
CCR1                  0.113   chemokine (C-C motif) receptor 1 
PTAFR                 0.111   platelet-activating factor receptor 
P2RY8                 0.110   G-protein coupled purinergic receptor P2Y8 
GPR18                 0.110   G protein-coupled receptor 18 
GPR18                 0.110   G protein-coupled receptor 18 
CCR9                  0.108   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.108   chemokine (C-C motif) receptor 9 isoform A 
P2RY6                 0.108   pyrimidinergic receptor P2Y6 
P2RY6                 0.108   pyrimidinergic receptor P2Y6 
P2RY6                 0.108   pyrimidinergic receptor P2Y6 
P2RY6                 0.108   pyrimidinergic receptor P2Y6 
OPRK1                 0.106   opioid receptor, kappa 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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