Guide to the Human Genome
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Name: OSGIN1 Sequence: fasta or formatted (477aa) NCBI GI: 33695101
Description:

oxidative stress induced growth inhibitor 1 isoform 3

Not currently referenced in the text

Other entries for this name:
alt prot {560aa} oxidative stress induced growth inhibitor 1 isoform 1
alt mRNA {477aa} oxidative stress induced growth inhibitor 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         40           2
 C cysteine            0.8          4           1
 D aspartate           5.9         28           2
 E glutamate           4.0         19           1
 F phenylalanine       3.8         18           1
 G glycine             8.8         42           2
 H histidine           3.6         17           2
 I isoleucine          3.8         18           2
 K lysine              3.8         18           2
 L leucine            11.3         54           2
 M methionine          1.9          9           2
 N asparagine          2.3         11           1
 P proline             8.0         38           2
 Q glutamine           4.4         21           2
 R arginine            5.5         26           2
 S serine              8.4         40           3
 T threonine           3.4         16           1
 V valine              7.8         37           2
 W tryptophan          1.3          6           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxidative stress induced growth inhibitor 1 isoform ... 
OSGIN1                1.000   oxidative stress induced growth inhibitor 1 isoform ...
OSGIN1                1.000   oxidative stress induced growth inhibitor 1 isoform...
OSGIN2                0.467   oxidative stress induced growth inhibitor family me...
OSGIN2                0.467   oxidative stress induced growth inhibitor family memb...
DNMT1                 0.011   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
DNMT1                 0.011   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
SALL1                 0.007   sal-like 1 isoform b 
SALL1                 0.007   sal-like 1 isoform a 
LOC100293868          0.006   PREDICTED: hypothetical protein 
LOC100288795          0.006   PREDICTED: hypothetical protein XP_002343543 
SNX10                 0.006   sorting nexin 10 
ZFPM2                 0.005   zinc finger protein, multitype 2 
POU4F1                0.005   POU domain, class 4, transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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