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Search of human proteins with 33598956
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1
[Homo sapiens]
(428 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom... 877 0.0
gi|33598958 ADP-ribosylation factor-like 2-like 1 isoform 2 [Hom... 620 e-178
gi|241982689 ADP-ribosylation factor-like 13 isoform b [Homo sap... 166 3e-41
gi|241982687 ADP-ribosylation factor-like 13 isoform a [Homo sap... 166 3e-41
gi|124248533 ADP-ribosylation factor-like 13 isoform a [Homo sap... 166 3e-41
gi|148612885 ADP-ribosylation factor-like 2 [Homo sapiens] 128 9e-30
gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens] 115 1e-25
gi|4507449 ADP-ribosylation factor related protein 1 isoform a [... 111 1e-24
gi|20270343 ADP-ribosylation factor-like 8A [Homo sapiens] 109 5e-24
gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens] 104 1e-22
gi|197927203 ADP-ribosylation factor related protein 1 isoform b... 103 4e-22
gi|29826299 ADP-ribosylation factor-like 6 [Homo sapiens] 101 1e-21
gi|14149815 ADP-ribosylation factor-like 6 [Homo sapiens] 101 1e-21
gi|4502197 ADP-ribosylation factor domain protein 1 isoform alph... 100 3e-21
gi|66879664 ADP-ribosylation factor 1 [Homo sapiens] 99 1e-20
gi|66879662 ADP-ribosylation factor 1 [Homo sapiens] 99 1e-20
gi|66879660 ADP-ribosylation factor 1 [Homo sapiens] 99 1e-20
gi|4502201 ADP-ribosylation factor 1 [Homo sapiens] 99 1e-20
gi|4502203 ADP-ribosylation factor 3 [Homo sapiens] 99 1e-20
gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens] 97 3e-20
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam... 97 4e-20
gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens] 96 5e-20
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet... 96 8e-20
gi|4502209 ADP-ribosylation factor 5 [Homo sapiens] 96 8e-20
gi|41327767 ADP-ribosylation factor-like 4D [Homo sapiens] 95 1e-19
gi|4502205 ADP-ribosylation factor 4 [Homo sapiens] 94 2e-19
gi|4502211 ADP-ribosylation factor 6 [Homo sapiens] 91 2e-18
gi|6552296 ADP-ribosylation factor-like 4C [Homo sapiens] 89 8e-18
gi|81295813 ADP-ribosylation factor-like 4A [Homo sapiens] 89 1e-17
gi|47078227 ADP-ribosylation factor-like 4A [Homo sapiens] 89 1e-17
>gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1 [Homo
sapiens]
Length = 428
Score = 877 bits (2267), Expect = 0.0
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MFSLMASCCGWFKRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINL 60
MFSLMASCCGWFKRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINL
Sbjct: 1 MFSLMASCCGWFKRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINL 60
Query: 61 RQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRI 120
RQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRI
Sbjct: 61 RQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRI 120
Query: 121 SGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIK 180
SGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIK
Sbjct: 121 SGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIK 180
Query: 181 KGLYWLLHVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNEQEQAEL 240
KGLYWLLHVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNEQEQAEL
Sbjct: 181 KGLYWLLHVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNEQEQAEL 240
Query: 241 DGTSGLAELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKMEHEQIET 300
DGTSGLAELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKMEHEQIET
Sbjct: 241 DGTSGLAELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKMEHEQIET 300
Query: 301 QGQVNHNGQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMKRNHRVE 360
QGQVNHNGQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMKRNHRVE
Sbjct: 301 QGQVNHNGQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMKRNHRVE 360
Query: 361 PLNIDDCAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHNDFYRKPLPPLAVPQRPN 420
PLNIDDCAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHNDFYRKPLPPLAVPQRPN
Sbjct: 361 PLNIDDCAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHNDFYRKPLPPLAVPQRPN 420
Query: 421 SDAHDVIS 428
SDAHDVIS
Sbjct: 421 SDAHDVIS 428
>gi|33598958 ADP-ribosylation factor-like 2-like 1 isoform 2 [Homo
sapiens]
Length = 321
Score = 620 bits (1600), Expect = e-178
Identities = 301/301 (100%), Positives = 301/301 (100%)
Query: 128 LANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLL 187
LANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLL
Sbjct: 21 LANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLL 80
Query: 188 HVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNEQEQAELDGTSGLA 247
HVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNEQEQAELDGTSGLA
Sbjct: 81 HVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNEQEQAELDGTSGLA 140
Query: 248 ELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKMEHEQIETQGQVNHN 307
ELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKMEHEQIETQGQVNHN
Sbjct: 141 ELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKMEHEQIETQGQVNHN 200
Query: 308 GQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMKRNHRVEPLNIDDC 367
GQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMKRNHRVEPLNIDDC
Sbjct: 201 GQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMKRNHRVEPLNIDDC 260
Query: 368 APESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHNDFYRKPLPPLAVPQRPNSDAHDVI 427
APESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHNDFYRKPLPPLAVPQRPNSDAHDVI
Sbjct: 261 APESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHNDFYRKPLPPLAVPQRPNSDAHDVI 320
Query: 428 S 428
S
Sbjct: 321 S 321
Score = 50.8 bits (120), Expect = 2e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 1 MFSLMASCCGWFKRWREPVR 20
MFSLMASCCGWFKRWREPVR
Sbjct: 1 MFSLMASCCGWFKRWREPVR 20
>gi|241982689 ADP-ribosylation factor-like 13 isoform b [Homo
sapiens]
Length = 256
Score = 166 bits (421), Expect = 3e-41
Identities = 82/190 (43%), Positives = 123/190 (64%)
Query: 1 MFSLMASCCGWFKRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINL 60
MF L++SCC + E R VT+ ++GL+N+GKT + Q P + L
Sbjct: 1 MFRLLSSCCSCLRTTEETRRNVTIPIIGLNNSGKTVLVEAFQKLLPSKTDHCMKSELTTL 60
Query: 61 RQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRI 120
++E++I+DL G ++ R W NYYA+++G++FV+DSSD RM+E K ++ +L R+
Sbjct: 61 LLDEYELSIYDLNGDLKGREAWPNYYAQAHGLVFVLDSSDIRRMQEVKIILTHLLSDKRV 120
Query: 121 SGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIK 180
+GKPIL+LANKQDK+ AL D+I+ L L+KLV E+KC C++EPCSAI ++ + I
Sbjct: 121 AGKPILILANKQDKKKALMPCDIIDYLLLKKLVKENKCPCRVEPCSAIRNLERRNHQPIV 180
Query: 181 KGLYWLLHVI 190
+GL WLL VI
Sbjct: 181 EGLRWLLAVI 190
>gi|241982687 ADP-ribosylation factor-like 13 isoform a [Homo
sapiens]
Length = 290
Score = 166 bits (421), Expect = 3e-41
Identities = 82/190 (43%), Positives = 123/190 (64%)
Query: 1 MFSLMASCCGWFKRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINL 60
MF L++SCC + E R VT+ ++GL+N+GKT + Q P + L
Sbjct: 1 MFRLLSSCCSCLRTTEETRRNVTIPIIGLNNSGKTVLVEAFQKLLPSKTDHCMKSELTTL 60
Query: 61 RQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRI 120
++E++I+DL G ++ R W NYYA+++G++FV+DSSD RM+E K ++ +L R+
Sbjct: 61 LLDEYELSIYDLNGDLKGREAWPNYYAQAHGLVFVLDSSDIRRMQEVKIILTHLLSDKRV 120
Query: 121 SGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIK 180
+GKPIL+LANKQDK+ AL D+I+ L L+KLV E+KC C++EPCSAI ++ + I
Sbjct: 121 AGKPILILANKQDKKKALMPCDIIDYLLLKKLVKENKCPCRVEPCSAIRNLERRNHQPIV 180
Query: 181 KGLYWLLHVI 190
+GL WLL VI
Sbjct: 181 EGLRWLLAVI 190
>gi|124248533 ADP-ribosylation factor-like 13 isoform a [Homo
sapiens]
Length = 290
Score = 166 bits (421), Expect = 3e-41
Identities = 82/190 (43%), Positives = 123/190 (64%)
Query: 1 MFSLMASCCGWFKRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINL 60
MF L++SCC + E R VT+ ++GL+N+GKT + Q P + L
Sbjct: 1 MFRLLSSCCSCLRTTEETRRNVTIPIIGLNNSGKTVLVEAFQKLLPSKTDHCMKSELTTL 60
Query: 61 RQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRI 120
++E++I+DL G ++ R W NYYA+++G++FV+DSSD RM+E K ++ +L R+
Sbjct: 61 LLDEYELSIYDLNGDLKGREAWPNYYAQAHGLVFVLDSSDIRRMQEVKIILTHLLSDKRV 120
Query: 121 SGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIK 180
+GKPIL+LANKQDK+ AL D+I+ L L+KLV E+KC C++EPCSAI ++ + I
Sbjct: 121 AGKPILILANKQDKKKALMPCDIIDYLLLKKLVKENKCPCRVEPCSAIRNLERRNHQPIV 180
Query: 181 KGLYWLLHVI 190
+GL WLL VI
Sbjct: 181 EGLRWLLAVI 190
>gi|148612885 ADP-ribosylation factor-like 2 [Homo sapiens]
Length = 184
Score = 128 bits (322), Expect = 9e-30
Identities = 66/179 (36%), Positives = 110/179 (61%), Gaps = 9/179 (5%)
Query: 13 KRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDL 72
K+ ++ R++ LLM+GLDNAGKT K GE + ++PT+GF+ L F++ I+D+
Sbjct: 8 KKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDV 67
Query: 73 GGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQ 132
GG +R W+NY+ + G+I+VVDS+D +RM++ + + +L R++G +L+ ANKQ
Sbjct: 68 GGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQ 127
Query: 133 DKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIA 191
D GAL + E L L+ + + H C I+ CSA++G +++ G+ WLL I+
Sbjct: 128 DLPGALSSNAIREVLELDSIRSHHWC---IQGCSAVTG------ENLLPGIDWLLDDIS 177
>gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]
Length = 182
Score = 115 bits (287), Expect = 1e-25
Identities = 59/169 (34%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 18 PVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIR 77
P ++V +L++GLDNAGKT K + E + PT GF+ +++ F++ ++D+GG +
Sbjct: 14 PDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRK 73
Query: 78 IRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGA 137
IR WKNY+ + +I+V+DS+D +R EET + ++E+L ++S P+L+ ANKQD A
Sbjct: 74 IRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTA 133
Query: 138 LGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
+++ E L+L + + + QI+ CSA++G G ++ G+ W+
Sbjct: 134 APASEIAEGLNLHTIRDR---VWQIQSCSALTGEG------VQDGMNWV 173
>gi|4507449 ADP-ribosylation factor related protein 1 isoform a
[Homo sapiens]
Length = 201
Score = 111 bits (277), Expect = 1e-24
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 17/179 (9%)
Query: 24 LLMVGLDNAGKTATA--------KGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGG 75
+L++GLDNAGKT K +G + TVG + + GK + +DLGG
Sbjct: 20 ILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQ 79
Query: 76 IRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKE 135
++ +W YYAE +GVI+V+DS+DEER+ E+K+A +++ + G P+LVLANKQD E
Sbjct: 80 EELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVE 139
Query: 136 GALGEADVIECLS-LEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIARD 193
L D+ S + CL Q CSA++G K +++G+ W++ + R+
Sbjct: 140 TCLSIPDIKTAFSDCTSKIGRRDCLTQ--ACSALTG------KGVREGIEWMVKCVVRN 190
>gi|20270343 ADP-ribosylation factor-like 8A [Homo sapiens]
Length = 186
Score = 109 bits (272), Expect = 5e-24
Identities = 56/165 (33%), Positives = 96/165 (58%), Gaps = 6/165 (3%)
Query: 1 MFSLMASCCGWFKR--WREPVRKVTLLMVGLDNAGKTATAKGI-QGEYPEDVAPTVGFSK 57
M +L WFK W+E ++ L +VGL +GKT I G++ ED+ PTVGF+
Sbjct: 1 MIALFNKLLDWFKALFWKE---EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM 57
Query: 58 INLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRH 117
+ +G + ++D+GG R R +W+ Y ++++VD++D+E++E +K + +L
Sbjct: 58 RKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK 117
Query: 118 PRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQI 162
P++ G P+LVL NK+D GAL E ++IE ++L + + C I
Sbjct: 118 PQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSI 162
>gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens]
Length = 186
Score = 104 bits (260), Expect = 1e-22
Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 1 MFSLMASCCGWFKR--WREPVRKVTLLMVGLDNAGKTATAKGI-QGEYPEDVAPTVGFSK 57
M +L++ WF+ W+E ++ L +VGL +GKT I G++ ED+ PTVGF+
Sbjct: 1 MLALISRLLDWFRSLFWKE---EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM 57
Query: 58 INLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRH 117
+ +G + I+D+GG R R +W+ Y +++++D++D E++E ++ + +L
Sbjct: 58 RKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
Query: 118 PRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQI 162
P++ G P+LVL NK+D AL E +IE ++L + + C I
Sbjct: 118 PQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSI 162
>gi|197927203 ADP-ribosylation factor related protein 1 isoform b
[Homo sapiens]
Length = 173
Score = 103 bits (256), Expect = 4e-22
Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 24 LLMVGLDNAGKTATA--------KGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGG 75
+L++GLDNAGKT K +G + TVG + + GK + +DLGG
Sbjct: 20 ILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQ 79
Query: 76 IRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKE 135
++ +W YYAE +GVI+V+DS+DEER+ E+K+A +++ + G P+LVLANKQD E
Sbjct: 80 EELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVE 139
Query: 136 GALGEADVIECLS-LEKLVNEHKCLCQIEPCSAISG 170
L D+ S + CL Q CSA++G
Sbjct: 140 TCLSIPDIKTAFSDCTSKIGRRDCLTQ--ACSALTG 173
>gi|29826299 ADP-ribosylation factor-like 6 [Homo sapiens]
Length = 186
Score = 101 bits (252), Expect = 1e-21
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQ--GEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIR 77
++V +L +GLDN+GKT ++ +++ PT+GFS + T+FD+ G R
Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGR 75
Query: 78 IRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGK--PILVLANKQDKE 135
R +W++YY E +IFV+DSSD RM KE + +L HP I + PIL ANK D
Sbjct: 76 YRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLR 135
Query: 136 GALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A+ V + L LE + ++ +C + AI G G +++G+ WL
Sbjct: 136 DAVTSVKVSQLLCLENIKDKPWHICASD---AIKGEG------LQEGVDWL 177
>gi|14149815 ADP-ribosylation factor-like 6 [Homo sapiens]
Length = 186
Score = 101 bits (252), Expect = 1e-21
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQ--GEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIR 77
++V +L +GLDN+GKT ++ +++ PT+GFS + T+FD+ G R
Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGR 75
Query: 78 IRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGK--PILVLANKQDKE 135
R +W++YY E +IFV+DSSD RM KE + +L HP I + PIL ANK D
Sbjct: 76 YRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLR 135
Query: 136 GALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A+ V + L LE + ++ +C + AI G G +++G+ WL
Sbjct: 136 DAVTSVKVSQLLCLENIKDKPWHICASD---AIKGEG------LQEGVDWL 177
>gi|4502197 ADP-ribosylation factor domain protein 1 isoform alpha
[Homo sapiens]
Length = 574
Score = 100 bits (249), Expect = 3e-21
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 18 PVRKVTLLMVGLDNAGKTATA-KGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGI 76
P ++ ++ +GLD AGKT K Q E+ + + PT+GF+ + + TI+D+GG
Sbjct: 401 PKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPI-PTIGFNVETVEYKNLKFTIWDVGGKH 459
Query: 77 RIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEG 136
++R +WK+YY + V+FVVDSS +R+ E ++++L + +L+ ANKQD G
Sbjct: 460 KLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAG 519
Query: 137 ALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
AL ++ E LSL KL I+ C A SG G + +GL WL
Sbjct: 520 ALSVEEITELLSLHKLCCGRS--WYIQGCDARSGMG------LYEGLDWL 561
>gi|66879664 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 98.6 bits (244), Expect = 1e-20
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++Y+ + G+IFVVDS+D ER+ E +E + ML + +LV ANKQD A+
Sbjct: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMN 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A++ + L L L + + I+ A SG G + +GL WL
Sbjct: 136 AAEITDKLGLHSLRHRN---WYIQATCATSGDG------LYEGLDWL 173
>gi|66879662 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 98.6 bits (244), Expect = 1e-20
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++Y+ + G+IFVVDS+D ER+ E +E + ML + +LV ANKQD A+
Sbjct: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMN 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A++ + L L L + + I+ A SG G + +GL WL
Sbjct: 136 AAEITDKLGLHSLRHRN---WYIQATCATSGDG------LYEGLDWL 173
>gi|66879660 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 98.6 bits (244), Expect = 1e-20
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++Y+ + G+IFVVDS+D ER+ E +E + ML + +LV ANKQD A+
Sbjct: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMN 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A++ + L L L + + I+ A SG G + +GL WL
Sbjct: 136 AAEITDKLGLHSLRHRN---WYIQATCATSGDG------LYEGLDWL 173
>gi|4502201 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 98.6 bits (244), Expect = 1e-20
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++Y+ + G+IFVVDS+D ER+ E +E + ML + +LV ANKQD A+
Sbjct: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMN 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A++ + L L L + + I+ A SG G + +GL WL
Sbjct: 136 AAEITDKLGLHSLRHRN---WYIQATCATSGDG------LYEGLDWL 173
>gi|4502203 ADP-ribosylation factor 3 [Homo sapiens]
Length = 181
Score = 98.6 bits (244), Expect = 1e-20
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++Y+ + G+IFVVDS+D ER+ E +E + ML + +LV ANKQD A+
Sbjct: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMN 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
A++ + L L L + + I+ A SG G + +GL WL
Sbjct: 136 AAEITDKLGLHSLRHRN---WYIQATCATSGDG------LYEGLDWL 173
>gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens]
Length = 196
Score = 97.1 bits (240), Expect = 3e-20
Identities = 54/150 (36%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 24 LLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQ-GKFEVTIFDLGGGIRIRGIW 82
++M+GLD+AGKT ++G + PTVGF+ L+ G +T++D+GG +R W
Sbjct: 15 VVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASW 74
Query: 83 KNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEAD 142
K+Y + +++V+DS+DE R+ E+ ++E+L P ++G P LVLANKQ+ AL
Sbjct: 75 KDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLK 134
Query: 143 VIECLSLEKLVNEHKCLCQIEPCSAISGYG 172
+ LSLE+ + ++ CSA++G G
Sbjct: 135 IRNRLSLERFQDH---CWELRGCSALTGEG 161
>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
[Homo sapiens]
Length = 546
Score = 96.7 bits (239), Expect = 4e-20
Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 18 PVRKVTLLMVGLDNAGKTATA-KGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGI 76
P ++ ++ +GLD AGKT K Q E+ + + PT+GF+ + + TI+D+GG
Sbjct: 401 PKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPI-PTIGFNVETVEYKNLKFTIWDVGGKH 459
Query: 77 RIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEG 136
++R +WK+YY + V+FVVDSS +R+ E ++++L + +L+ ANKQD G
Sbjct: 460 KLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAG 519
Query: 137 ALGEADVIECLSLEKLVNEHKC 158
AL ++ E LSL KL C
Sbjct: 520 ALSVEEITELLSLHKLCCGRSC 541
>gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens]
Length = 192
Score = 96.3 bits (238), Expect = 5e-20
Identities = 47/154 (30%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLR-QGKFEVTIFDLGGGIRI 78
++ +L++GLD+AGK+ ++ PT+GF+ + + +T++D+GG ++
Sbjct: 12 KQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELERNLSLTVWDVGGQEKM 71
Query: 79 RGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGAL 138
R +W Y + G+++VVDS+D++R+EE++ +L++ I P+++LANKQD GAL
Sbjct: 72 RTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVPVVLLANKQDMPGAL 131
Query: 139 GEADVIECLSLEKLVNEHKCLCQIEPCSAISGYG 172
D+ ++KL ++ ++PC A++G G
Sbjct: 132 TAEDITRMFKVKKLCSDRN--WYVQPCCALTGEG 163
>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
[Homo sapiens]
Length = 569
Score = 95.5 bits (236), Expect = 8e-20
Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 18 PVRKVTLLMVGLDNAGKTATA-KGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGI 76
P ++ ++ +GLD AGKT K Q E+ + + PT+GF+ + + TI+D+GG
Sbjct: 401 PKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPI-PTIGFNVETVEYKNLKFTIWDVGGKH 459
Query: 77 RIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEG 136
++R +WK+YY + V+FVVDSS +R+ E ++++L + +L+ ANKQD G
Sbjct: 460 KLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAG 519
Query: 137 ALGEADVIECLSLEKL 152
AL ++ E LSL KL
Sbjct: 520 ALSVEEITELLSLHKL 535
>gi|4502209 ADP-ribosylation factor 5 [Homo sapiens]
Length = 180
Score = 95.5 bits (236), Expect = 8e-20
Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR
Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++Y+ + G+IFVVDS+D ER++E+ + + +ML+ + +LV ANKQD A+
Sbjct: 76 PLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMP 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIAR 192
+++ + L L+ L + ++ A G G + GL WL H +++
Sbjct: 136 VSELTDKLGLQHLRSR---TWYVQATCATQGTG------LYDGLDWLSHELSK 179
>gi|41327767 ADP-ribosylation factor-like 4D [Homo sapiens]
Length = 201
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/174 (33%), Positives = 102/174 (58%), Gaps = 13/174 (7%)
Query: 24 LLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQ---GKFEVT--IFDLGGGIRI 78
++++GLD+AGKT+ ++ + PT GF+ +R G +T ++D+GG ++
Sbjct: 24 VVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKL 83
Query: 79 RGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGAL 138
R +W++Y + G++FVVD+++ ER+EE K + + R G P+LVLANKQD+ GAL
Sbjct: 84 RPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGAL 143
Query: 139 GEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIAR 192
A+V + L++ +L L ++ CSA+ G G +++GL L +I +
Sbjct: 144 SAAEVEKRLAVRELA--AATLTHVQGCSAVDGLG------LQQGLERLYEMILK 189
>gi|4502205 ADP-ribosylation factor 4 [Homo sapiens]
Length = 180
Score = 94.4 bits (233), Expect = 2e-19
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG RIR
Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRIR 75
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+WK+Y+ + G+IFVVDS+D ER++E + + +ML + +L+ ANKQD A+
Sbjct: 76 PLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMA 135
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIAR 192
+++ + L L+ L N ++ A G G + +GL WL + +++
Sbjct: 136 ISEMTDKLGLQSLRNR---TWYVQATCATQGTG------LYEGLDWLSNELSK 179
>gi|4502211 ADP-ribosylation factor 6 [Homo sapiens]
Length = 175
Score = 90.9 bits (224), Expect = 2e-18
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIR 79
+++ +LM+GLD AGKT ++ PTVGF+ + + ++D+GG +IR
Sbjct: 12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIR 71
Query: 80 GIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALG 139
+W++YY + G+IFVVD +D +R++E ++ + ++ + IL+ ANKQD A+
Sbjct: 72 PLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMK 131
Query: 140 EADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
++ E L L ++ + + ++P A SG G + +GL WL
Sbjct: 132 PHEIQEKLGLTRIRDRN---WYVQPSCATSGDG------LYEGLTWL 169
>gi|6552296 ADP-ribosylation factor-like 4C [Homo sapiens]
Length = 192
Score = 89.0 bits (219), Expect = 8e-18
Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 24 LLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFS--KINLRQGK---FEVTIFDLGGGIRI 78
++M+GLD+AGKT ++ + PT+GF+ KI L G +D+GG ++
Sbjct: 16 IVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKL 75
Query: 79 RGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGAL 138
R +WK+Y + G+I+VVDS D +R+EE K + ++ + G P+LV+ANKQD +L
Sbjct: 76 RPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSL 135
Query: 139 GEADVIECLSLEKLVNEHKCLCQIEPCSAISGYG 172
A++ + L+L +L+ ++P AI G G
Sbjct: 136 PVAEIEKQLALHELI--PATTYHVQPACAIIGEG 167
>gi|81295813 ADP-ribosylation factor-like 4A [Homo sapiens]
Length = 200
Score = 88.6 bits (218), Expect = 1e-17
Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 13/185 (7%)
Query: 24 LLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFS--KINLRQGKFEVTIF---DLGGGIRI 78
++++GLD AGKT +Q + PT GF+ KI + G + F D+GG ++
Sbjct: 23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKL 82
Query: 79 RGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGAL 138
R +WK+Y + G++FVVDS D ERMEE K + ++ R G P+L++ANKQD +L
Sbjct: 83 RPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSL 142
Query: 139 GEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIARDFDALN 198
+++ + L++ +L + ++P AI G G +K+GL L +I + L
Sbjct: 143 SLSEIEKLLAMGELSSSTP--WHLQPTCAIIGDG------LKEGLEKLHDMIIKRRKMLR 194
Query: 199 ERIQK 203
++ +K
Sbjct: 195 QQKKK 199
>gi|47078227 ADP-ribosylation factor-like 4A [Homo sapiens]
Length = 200
Score = 88.6 bits (218), Expect = 1e-17
Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 13/185 (7%)
Query: 24 LLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFS--KINLRQGKFEVTIF---DLGGGIRI 78
++++GLD AGKT +Q + PT GF+ KI + G + F D+GG ++
Sbjct: 23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKL 82
Query: 79 RGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGAL 138
R +WK+Y + G++FVVDS D ERMEE K + ++ R G P+L++ANKQD +L
Sbjct: 83 RPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSL 142
Query: 139 GEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIARDFDALN 198
+++ + L++ +L + ++P AI G G +K+GL L +I + L
Sbjct: 143 SLSEIEKLLAMGELSSSTP--WHLQPTCAIIGDG------LKEGLEKLHDMIIKRRKMLR 194
Query: 199 ERIQK 203
++ +K
Sbjct: 195 QQKKK 199
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,882,546
Number of Sequences: 37866
Number of extensions: 1055525
Number of successful extensions: 18040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 667
Number of HSP's that attempted gapping in prelim test: 10239
Number of HSP's gapped (non-prelim): 5313
length of query: 428
length of database: 18,247,518
effective HSP length: 105
effective length of query: 323
effective length of database: 14,271,588
effective search space: 4609722924
effective search space used: 4609722924
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.