Guide to the Human Genome
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Name: RAB31 Sequence: fasta or formatted (195aa) NCBI GI: 33589861
Description:

RAB31, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         15           3
 C cysteine            3.1          6           2
 D aspartate           5.1         10           1
 E glutamate           7.2         14           2
 F phenylalanine       3.6          7           1
 G glycine             6.7         13           1
 H histidine           3.1          6           1
 I isoleucine          8.7         17           1
 K lysine              7.7         15           2
 L leucine             6.2         12           2
 M methionine          3.1          6           2
 N asparagine          4.6          9           2
 P proline             4.6          9           2
 Q glutamine           3.1          6           1
 R arginine            4.1          8           2
 S serine              6.2         12           2
 T threonine           5.1         10           1
 V valine              6.7         13           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.6          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB31, member RAS oncogene family 
RAB22A                0.669   RAS-related protein RAB-22A 
RAB5A                 0.427   RAB5A, member RAS oncogene family 
RAB5C                 0.416   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.416   RAB5C, member RAS oncogene family isoform b 
RAB5B                 0.405   RAB5B, member RAS oncogene family 
RAB1A                 0.336   RAB1A, member RAS oncogene family isoform 1 
RAB6A                 0.333   RAB6A, member RAS oncogene family isoform a 
RAB25                 0.331   RAB25 
RAB21                 0.331   RAB21, member RAS oncogene family 
RAB6A                 0.325   RAB6A, member RAS oncogene family isoform b 
RAB6B                 0.325   RAB6B, member RAS oncogene family 
RAB11A                0.323   Ras-related protein Rab-11A 
RAB11B                0.320   RAB11B, member RAS oncogene family 
RAB1B                 0.320   RAB1B, member RAS oncogene family 
LOC150786             0.317   RAB6C-like 
RAB17                 0.315   RAB17, member RAS oncogene family 
RAB8B                 0.307   RAB8B, member RAS oncogene family 
RAB10                 0.304   ras-related GTP-binding protein RAB10 
RAB6C                 0.304   RAB6C, member RAS oncogene family 
RAB13                 0.301   RAB13, member RAS oncogene family 
RAB30                 0.299   RAB30, member RAS oncogene family 
RAB8A                 0.296   mel transforming oncogene 
RAB41                 0.293   RAB41, member RAS oncogene family 
RAB2A                 0.293   RAB2A, member RAS oncogene family 
RAB18                 0.291   RAB18, member RAS oncogene family 
RAB2B                 0.291   RAB2B protein isoform 1 
LOC100131294          0.291   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.291   PREDICTED: similar to hCG24991 
LOC100131294          0.291   PREDICTED: similar to hCG24991 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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