Guide to the Human Genome
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Name: MAL Sequence: fasta or formatted (111aa) NCBI GI: 12408661
Description:

T-lymphocyte maturation-associated protein isoform b

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [97aa] T-lymphocyte maturation-associated protein isoform c
alt prot [55aa] T-lymphocyte maturation-associated protein isoform d
alt prot [153aa] T-lymphocyte maturation-associated protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1          9           3
 C cysteine            0.9          1           1
 D aspartate           0.9          1           1
 E glutamate           1.8          2           1
 F phenylalanine       9.9         11           1
 G glycine             8.1          9           2
 H histidine           1.8          2           1
 I isoleucine          8.1          9           2
 K lysine              0.9          1           1
 L leucine            12.6         14           2
 M methionine          1.8          2           1
 N asparagine          0.0          0           0
 P proline             4.5          5           1
 Q glutamine           0.9          1           1
 R arginine            0.9          1           1
 S serine              9.9         11           2
 T threonine           9.0         10           3
 V valine             12.6         14           2
 W tryptophan          4.5          5           1
 Y tyrosine            2.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-lymphocyte maturation-associated protein isoform b... 
MAL                   0.896   T-lymphocyte maturation-associated protein isoform a ...
MAL                   0.353   T-lymphocyte maturation-associated protein isoform c...
MALL                  0.259   mal, T-cell differentiation protein-like 
MAL                   0.234   T-lymphocyte maturation-associated protein isoform d...
MAL2                  0.234   MAL2 proteolipid protein 
LOC100287119          0.179   PREDICTED: hypothetical protein XP_002342305 
CMTM8                 0.134   CKLF-like MARVEL transmembrane domain containing 8 [...
LOC100132330          0.119   PREDICTED: similar to mal, T-cell differentiation p...
LOC100132330          0.119   PREDICTED: similar to mal, T-cell differentiation p...
LOC100132330          0.119   PREDICTED: similar to mal, T-cell differentiation p...
PLLP                  0.114   plasmolipin 
MYADML2               0.075   myeloid-associated differentiation marker-like 2 [H...
SLC36A3               0.015   solute carrier family 36, member 3 isoform 1 
SLC36A3               0.015   solute carrier family 36, member 3 isoform 2 
OCLN                  0.010   occludin 
ABCG2                 0.010   ATP-binding cassette, sub-family G, member 2 
CCR8                  0.010   chemokine (C-C motif) receptor 8 
CXCR7                 0.010   chemokine orphan receptor 1 
CHPT1                 0.010   choline phosphotransferase 1 
MYADM                 0.005   myeloid-associated differentiation marker 
MYADM                 0.005   myeloid-associated differentiation marker 
MYADM                 0.005   myeloid-associated differentiation marker 
MYADM                 0.005   myeloid-associated differentiation marker 
MYADM                 0.005   myeloid-associated differentiation marker 
GRM8                  0.005   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.005   glutamate receptor, metabotropic 8 isoform a precur...
FZD5                  0.005   frizzled 5 precursor 
SLC24A2               0.005   solute carrier family 24 (sodium/potassium/calcium ex...
CMTM4                 0.005   chemokine-like factor superfamily 4 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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