Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 122937446

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122937446 von Willebrand factor C domain-containing protein
2-like [Homo sapiens]
         (222 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122937446 von Willebrand factor C domain-containing protein 2...   506   e-144
gi|38348414 von Willebrand factor C domain containing 2 [Homo sa...   262   2e-70
gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]    79   4e-15
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]    71   6e-13
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]    70   1e-12
gi|34147715 chordin-like 1 isoform 3 precursor [Homo sapiens]          69   4e-12
gi|221316563 chordin-like 1 isoform 2 precursor [Homo sapiens]         69   4e-12
gi|221316561 chordin-like 1 isoform 1 precursor [Homo sapiens]         69   4e-12
gi|108773804 Fraser syndrome 1 [Homo sapiens]                          67   2e-11
gi|40353769 chordin-like 2 [Homo sapiens]                              59   4e-09
gi|10092639 cysteine-rich motor neuron 1 [Homo sapiens]                57   1e-08
gi|37693519 BMP-binding endothelial regulator precursor protein ...    54   8e-08
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       50   2e-06
gi|223029476 NEL-like protein 2 isoform d [Homo sapiens]               47   1e-05
gi|223029474 NEL-like protein 2 isoform c [Homo sapiens]               47   1e-05
gi|223029472 NEL-like protein 2 isoform b precursor [Homo sapiens]     47   1e-05
gi|223029470 NEL-like protein 2 isoform a [Homo sapiens]               47   1e-05
gi|5453766 NEL-like protein 2 isoform b precursor [Homo sapiens]       47   1e-05
gi|30089980 chordin [Homo sapiens]                                     45   5e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      45   6e-05
gi|221316568 chordin-like 1 isoform 4 precursor [Homo sapiens]         44   1e-04
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]      42   3e-04
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ...    42   3e-04
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]      42   4e-04
gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]            42   5e-04
gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]            42   5e-04
gi|239744589 PREDICTED: mucin 19 [Homo sapiens]                        42   5e-04
gi|148833508 notch1 preproprotein [Homo sapiens]                       41   0.001
gi|109150416 peroxidasin [Homo sapiens]                                41   0.001
gi|148727298 keratin associated protein 10-6 [Homo sapiens]            41   0.001

>gi|122937446 von Willebrand factor C domain-containing protein
           2-like [Homo sapiens]
          Length = 222

 Score =  506 bits (1304), Expect = e-144
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MALHIHEACILLLVIPGLVTSAAISHEDYPADEGDQISSNDNLIFDDYRGKGCVDDSGFV 60
           MALHIHEACILLLVIPGLVTSAAISHEDYPADEGDQISSNDNLIFDDYRGKGCVDDSGFV
Sbjct: 1   MALHIHEACILLLVIPGLVTSAAISHEDYPADEGDQISSNDNLIFDDYRGKGCVDDSGFV 60

Query: 61  YKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHG 120
           YKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHG
Sbjct: 61  YKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHG 120

Query: 121 KNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGPNCFAG 180
           KNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGPNCFAG
Sbjct: 121 KNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGPNCFAG 180

Query: 181 TTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQGKQTV 222
           TTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQGKQTV
Sbjct: 181 TTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQGKQTV 222


>gi|38348414 von Willebrand factor C domain containing 2 [Homo
           sapiens]
          Length = 325

 Score =  262 bits (669), Expect = 2e-70
 Identities = 108/181 (59%), Positives = 136/181 (75%), Gaps = 4/181 (2%)

Query: 41  DNLIFDDYRGKGCVDDSGFVYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKV 100
           +  ++ DYRGKGCVD+SGFVY +GE+F PG S CPC+C  +GP+C QPECP++HP+C  V
Sbjct: 143 EEYVYPDYRGKGCVDESGFVYAIGEKFAPGPSACPCLCTEEGPLCAQPECPRLHPRCIHV 202

Query: 101 EHNGCCPECKEVKNFCEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNP 160
           + + CCP+CKE KN+CE+ GK Y+ LEEF  SPCE CRCE + EV C V+ C   ECV+P
Sbjct: 203 DTSQCCPQCKERKNYCEFRGKTYQTLEEFVVSPCERCRCEANGEVLCTVSACPQTECVDP 262

Query: 161 VYEPEQCCPVCKNGPNCFAGTTIIPAGIEVKVDECNICHC--HNGDW--WKPAQCSKREC 216
           VYEP+QCCP+CKNGPNCFA T +IPAG EVK DEC ICHC    G W   + A C++ EC
Sbjct: 263 VYEPDQCCPICKNGPNCFAETAVIPAGREVKTDECTICHCTYEEGTWRIERQAMCTRHEC 322

Query: 217 Q 217
           +
Sbjct: 323 R 323


>gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]
          Length = 814

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 60/172 (34%), Positives = 74/172 (43%), Gaps = 25/172 (14%)

Query: 51  KGCVDDSGFVYKLGERFFPGH-SNCPCVCALDGPV-CDQPECPKIHPKCTKVEHNGCCPE 108
           +GC   +G  Y  GE F P   + C C   L+G + C+Q  CP+    C   E   CCP 
Sbjct: 136 RGC-SQNGQTYGNGETFSPDACTTCRC---LEGTITCNQKPCPR--GPCP--EPGACCPH 187

Query: 109 CKEVKNFCEYHGKNYKILEEFKPS--PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQ 166
           CK     C+Y G+ Y+    F  S  PC  C C  S  V C+   C    C  PV  P  
Sbjct: 188 CKPG---CDYEGQLYEEGVTFLSSSNPCLQCTCLRSR-VRCMALKCPPSPCPEPVLRPGH 243

Query: 167 CCPVCKNGPNCFAGTTIIPAGIE--VKVDECNICHCHNGDWWKPAQCSKREC 216
           CCP C+    C  G +    G E     D C IC C  G      QC +REC
Sbjct: 244 CCPTCQ---GCTEGGSHWEHGQEWTTPGDPCRICRCLEGH----IQCRQREC 288



 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 45/145 (31%), Positives = 52/145 (35%), Gaps = 16/145 (11%)

Query: 76  CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKP--SP 133
           CVC    P C    CP    +        CCP C      C YH + Y   + F    SP
Sbjct: 447 CVCQDGVPKCGAVLCPPAPCQHPTQPPGACCPSCDS----CTYHSQVYANGQNFTDADSP 502

Query: 134 CEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGPNCFAGTTIIPAG--IEVK 191
           C  C C+    V C + DC    C  P   P QCCP C   P+C     +   G      
Sbjct: 503 CHACHCQDGT-VTCSLVDCPPTTCARPQSGPGQCCPRC---PDCILEEEVFVDGESFSHP 558

Query: 192 VDECNICHCHNGDWWKPAQCSKREC 216
            D C  C C  G     A C  R C
Sbjct: 559 RDPCQECRCQEGH----AHCQPRPC 579



 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 17/152 (11%)

Query: 57  SGFVYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFC 116
           +G  ++ GE    G     C CA     C+   CP +  +        CCP C    + C
Sbjct: 313 NGREHRSGEPVGSGDPCSHCRCANGSVQCEPLPCPPVPCRHPGKIPGQCCPVC----DGC 368

Query: 117 EYHGKNYKILEEFKPSP---CEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKN 173
           EY G  Y+  E F+      C  C C+ + EV C   +C V  C  P     Q CP C+ 
Sbjct: 369 EYQGHQYQSQETFRLQERGLCVRCSCQ-AGEVSCEEQECPVTPCALPA-SGRQLCPACEL 426

Query: 174 GPNCFAGTTIIPAGIEVKVD--ECNICHCHNG 203
               FA       G++ + D   C  C C +G
Sbjct: 427 DGEEFA------EGVQWEPDGRPCTACVCQDG 452



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 18/171 (10%)

Query: 51  KGCVDDSGFVYKLGERFFPGHSNCPCVCALDGPV-CDQPECPKIHPKCTKVEHNGCCPEC 109
           +GC +  G  ++ G+ +      C     L+G + C Q EC  + P   +     CCP C
Sbjct: 249 QGCTE-GGSHWEHGQEWTTPGDPCRICRCLEGHIQCRQRECASLCPYPARPLPGTCCPVC 307

Query: 110 KEVKNFCEYHGKNYKILEEF-KPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCC 168
               + C  +G+ ++  E      PC  CRC  +  V C    C    C +P   P QCC
Sbjct: 308 ----DGCFLNGREHRSGEPVGSGDPCSHCRCA-NGSVQCEPLPCPPVPCRHPGKIPGQCC 362

Query: 169 PVCKNGPNCFAGTTIIPAGIEVKVDE---CNICHCHNGDWWKPAQCSKREC 216
           PVC     C        +    ++ E   C  C C  G+      C ++EC
Sbjct: 363 PVC---DGCEYQGHQYQSQETFRLQERGLCVRCSCQAGE----VSCEEQEC 406



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 60  VYKLGERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCP-ECKEVKNFCE 117
           V+  GE F      C  C C      C    CP+    C       CCP +C      C 
Sbjct: 548 VFVDGESFSHPRDPCQECRCQEGHAHCQPRPCPRA--PCAHPLPGTCCPNDCSG----CA 601

Query: 118 YHGKNYKILEEFK-PS-PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP 175
           + GK Y    +F  PS PC  CRC   N V C+   C    C  PV  P +CCP C   P
Sbjct: 602 FGGKEYPSGADFPHPSDPCRLCRCLSGN-VQCLARRCVPLPCPEPVLLPGECCPQCPAAP 660


>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
          Length = 1503

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 45/145 (31%), Positives = 52/145 (35%), Gaps = 16/145 (11%)

Query: 76  CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKP--SP 133
           CVC    P C    CP    +        CCP C      C YH + Y   + F    SP
Sbjct: 389 CVCQDGVPKCGAVLCPPAPCQHPTQPPGACCPSCDS----CTYHSQVYANGQNFTDADSP 444

Query: 134 CEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGPNCFAGTTIIPAG--IEVK 191
           C  C C+    V C + DC    C  P   P QCCP C   P+C     +   G      
Sbjct: 445 CHACHCQDGT-VTCSLVDCPPTTCARPQSGPGQCCPRC---PDCILEEEVFVDGESFSHP 500

Query: 192 VDECNICHCHNGDWWKPAQCSKREC 216
            D C  C C  G     A C  R C
Sbjct: 501 RDPCQECRCQEGH----AHCQPRPC 521



 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 27/172 (15%)

Query: 49   RGKGCVDDSGFVYKLGERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCP 107
            R +GC+   G  +  G R+ P  S C  CVC      C + +C     +  +  H+ CCP
Sbjct: 892  RCRGCLAH-GEEHPEGSRWVPPDSACSSCVCHEGVVTCARIQCISSCAQPRQGPHD-CCP 949

Query: 108  ECKEVKNFCEYHGKNYKILEEFKPS--PCEWCRCEPSNE----VHC------VVADCAVP 155
            +C +    CE+ G+ Y+  E F+P   PCE C CEP  E    + C       +  C   
Sbjct: 950  QCSD----CEHEGRKYEPGESFQPGADPCEVCICEPQPEGPPSLRCHRRQCPSLVGCPPS 1005

Query: 156  ECVNPVYEPEQCCPVCKNG-PNCFAGTTIIPAGIEV-KVDECNICHCHNGDW 205
            + + P   P+ CCP C     NC  G      G E+   D C  C C +  W
Sbjct: 1006 QLLPP--GPQHCCPTCAEALSNCSEGL----LGSELAPPDPCYTCQCQDLTW 1051



 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 23/172 (13%)

Query: 52  GCVDDSGFVYKLGERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK 110
           GC+   G  +  GERF    + C  C+C      C+   C      C       CCP+C 
Sbjct: 661 GCLYQ-GKEFASGERFPSPTAACHLCLCWEGSVSCEPKACAPA--LCPFPARGDCCPDC- 716

Query: 111 EVKNFCEYHGKNYKILEEFKP--SPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCC 168
              + CEY G++Y   +EF     PC  C C     V C    C  P C +P+     CC
Sbjct: 717 ---DGCEYLGESYLSNQEFPDPREPCNLCTCL-GGFVTCGRRPCEPPGCSHPLIPSGHCC 772

Query: 169 PVCK----NGPNCFAGTTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKREC 216
           P C+    +G    +G T +P  ++     C++C C  G      +C K+ C
Sbjct: 773 PTCQGCRYHGVTTASGET-LPDPLD---PTCSLCTCQEGS----MRCQKKPC 816



 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 44/161 (27%), Positives = 60/161 (37%), Gaps = 19/161 (11%)

Query: 64  GERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKN 122
           GE F     +C  C C      C + +CP +  K    E   CCP C+     C  HG+ 
Sbjct: 847 GEEFEGPAGSCEWCRCQAGQVSCVRLQCPPLPCKLQVTERGSCCPRCRG----CLAHGEE 902

Query: 123 YKILEEFKP--SPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKN----GPN 176
           +     + P  S C  C C     V C    C +  C  P   P  CCP C +    G  
Sbjct: 903 HPEGSRWVPPDSACSSCVCH-EGVVTCARIQC-ISSCAQPRQGPHDCCPQCSDCEHEGRK 960

Query: 177 CFAGTTIIPAGIEVKVDECNICHCHNGDWWKPA-QCSKREC 216
              G +  P       D C +C C       P+ +C +R+C
Sbjct: 961 YEPGESFQPG-----ADPCEVCICEPQPEGPPSLRCHRRQC 996



 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 16/112 (14%)

Query: 107 PECKEVKNFCEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQ 166
           P C+     C  +G+ Y   E F P  C  CRC  +  V C    C+   C+     P +
Sbjct: 133 PHCRG----CSQNGQTYGNGETFSPDACTTCRCL-TGAVQCQGPSCSELNCLESCTPPGE 187

Query: 167 CCPVCKNGPNCFAGTTIIPAGIE--VKVDECNICHCHNGDWWKPAQCSKREC 216
           CCP+C     C  G +    G E     D C IC C  G      QC +REC
Sbjct: 188 CCPIC-----CTEGGSHWEHGQEWTTPGDPCRICRCLEGH----IQCRQREC 230



 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 17/152 (11%)

Query: 57  SGFVYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFC 116
           +G  ++ GE    G     C CA     C+   CP +  +        CCP C    + C
Sbjct: 255 NGREHRSGEPVGSGDPCSHCRCANGSVQCEPLPCPPVPCRHPGKIPGQCCPVC----DGC 310

Query: 117 EYHGKNYKILEEFKPSP---CEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKN 173
           EY G  Y+  E F+      C  C C+ + EV C   +C V  C  P     Q CP C+ 
Sbjct: 311 EYQGHQYQSQETFRLQERGLCVRCSCQ-AGEVSCEEQECPVTPCALPA-SGRQLCPACEL 368

Query: 174 GPNCFAGTTIIPAGIEVKVD--ECNICHCHNG 203
               FA       G++ + D   C  C C +G
Sbjct: 369 DGEEFA------EGVQWEPDGRPCTACVCQDG 394



 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 17/169 (10%)

Query: 53  CVDDSGFVYKLGERFFPGHSNCPCVCALDGPV-CDQPECPKIHPKCTKVEHNGCCPECKE 111
           C  + G  ++ G+ +      C     L+G + C Q EC  + P   +     CCP C  
Sbjct: 192 CCTEGGSHWEHGQEWTTPGDPCRICRCLEGHIQCRQRECASLCPYPARPLPGTCCPVC-- 249

Query: 112 VKNFCEYHGKNYKILEEF-KPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPV 170
             + C  +G+ ++  E      PC  CRC  +  V C    C    C +P   P QCCPV
Sbjct: 250 --DGCFLNGREHRSGEPVGSGDPCSHCRCA-NGSVQCEPLPCPPVPCRHPGKIPGQCCPV 306

Query: 171 CKNGPNCFAGTTIIPAGIEVKVDE---CNICHCHNGDWWKPAQCSKREC 216
           C     C        +    ++ E   C  C C  G+      C ++EC
Sbjct: 307 C---DGCEYQGHQYQSQETFRLQERGLCVRCSCQAGE----VSCEEQEC 348



 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 40/122 (32%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 60  VYKLGERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCP-ECKEVKNFCE 117
           V+  GE F      C  C C      C    CP+    C       CCP +C      C 
Sbjct: 490 VFVDGESFSHPRDPCQECRCQEGHAHCQPRPCPRA--PCAHPLPGTCCPNDCSG----CA 543

Query: 118 YHGKNYKILEEFK-PS-PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP 175
           + GK Y    +F  PS PC  CRC   N V C+   C    C  PV  P +CCP C    
Sbjct: 544 FGGKEYPSGADFPHPSDPCRLCRCLSGN-VQCLARRCVPLPCPEPVLLPGECCPQCPAPA 602

Query: 176 NC 177
            C
Sbjct: 603 GC 604



 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 33/125 (26%), Positives = 44/125 (35%), Gaps = 11/125 (8%)

Query: 63   LGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHN----GCCPECKEVKNFCEY 118
            LG    P      C C     +C    CP++   C   E +     CCP C+     C +
Sbjct: 1031 LGSELAPPDPCYTCQCQDLTWLCIHQACPEL--SCPLSERHTPPGSCCPVCRAPTQSCVH 1088

Query: 119  HGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPEC---VNPVYEPEQCCPVCKNGP 175
             G+     E +    C  C C  +  V C    C+   C     P   P  CCP C   P
Sbjct: 1089 QGREVASGERWTVDTCTSCSC-MAGTVRCQSQRCSPLSCGPDKAPALSPGSCCPRCLPRP 1147

Query: 176  -NCFA 179
             +C A
Sbjct: 1148 ASCMA 1152


>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
          Length = 955

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 19/172 (11%)

Query: 52  GC-VDDSGFVYKLGERFFPGHSNCPCVCALDGPV-CDQPECPKIHPKCTKVEHNGCCPEC 109
           GC +DD+G  + +G+ + PG     C+C  DG V C + +C    P   ++    CCP+C
Sbjct: 567 GCSLDDNGVEFPIGQIWSPGDPCELCICQADGSVSCKRTDCVDSCPHPIRIP-GQCCPDC 625

Query: 110 KEVKNFCEYHGKNYKILEEFKP--SPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQC 167
                 C Y G+ +   E F     PC  C C     V C   DC +  C  P +   +C
Sbjct: 626 SA---GCTYTGRIFYNNETFPSVLDPCLSCIC-LLGSVACSPVDCPI-TCTYPFHPDGEC 680

Query: 168 CPVCKNGPNC-FAGTTIIPAGIEVKVDE-CNICHCHNGDWWKPAQCSKRECQ 217
           CPVC+   +C + G  +    +    DE C  C C  G+      C K  CQ
Sbjct: 681 CPVCR---DCNYEGRKVANGQVFTLDDEPCTRCTCQLGE----VSCEKVPCQ 725



 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 54/179 (30%), Positives = 69/179 (38%), Gaps = 27/179 (15%)

Query: 52  GCVDDSGFVYKLGERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK 110
           GC   SG V   G+ F P + NC  CVC      C  PECP     C       CC  C 
Sbjct: 442 GCFH-SGVVRAEGDVFSPPNENCTVCVCLAGNVSCISPECPS--GPCQTPPQTDCC-TCV 497

Query: 111 EVKNFCEYHGKNYKILEEFK--PSPCEWCRCEPSNEVHCVVADCAVPECVNPVYE----P 164
            V+  C +HG+ Y     F      C  C C+ + EV C    C  PE   P  E    P
Sbjct: 498 PVR--CYFHGRWYADGAVFSGGGDECTTCVCQ-NGEVECSFMPC--PELACPREEWRLGP 552

Query: 165 EQCCPVCKNGPNCFAGTTIIPAGIEVKV-------DECNICHCHNGDWWKPAQCSKREC 216
            QCC  C+  P    G ++   G+E  +       D C +C C          C + +C
Sbjct: 553 GQCCFTCQE-PTPSTGCSLDDNGVEFPIGQIWSPGDPCELCICQADG---SVSCKRTDC 607



 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 50/170 (29%), Positives = 64/170 (37%), Gaps = 25/170 (14%)

Query: 61  YKLGERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHN----GCCPECKEV--K 113
           Y  G  F  G   C  CVC      C    CP++   C + E       CC  C+E    
Sbjct: 508 YADGAVFSGGGDECTTCVCQNGEVECSFMPCPEL--ACPREEWRLGPGQCCFTCQEPTPS 565

Query: 114 NFCEY--HGKNYKILEEFKPS-PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPV 170
             C    +G  + I + + P  PCE C C+    V C   DC V  C +P+  P QCCP 
Sbjct: 566 TGCSLDDNGVEFPIGQIWSPGDPCELCICQADGSVSCKRTDC-VDSCPHPIRIPGQCCPD 624

Query: 171 CKNG----PNCFAGTTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKREC 216
           C  G       F      P+     +D C  C C  G       CS  +C
Sbjct: 625 CSAGCTYTGRIFYNNETFPS----VLDPCLSCICLLGS----VACSPVDC 666


>gi|34147715 chordin-like 1 isoform 3 precursor [Homo sapiens]
          Length = 456

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 30/139 (21%)

Query: 61  YKLGERFFP-----GHSNCP-CVCALDGPV-CDQPECPKIHPKCTKVEH--NGCCPEC-- 109
           Y++GER+ P     G   C  C+C+ +G V C +  CP +H  C    H  + CCP C  
Sbjct: 44  YRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH--CLSPVHIPHLCCPRCPD 101

Query: 110 -------KEVKNFCEYHGKNYKILEEF---------KPSPCEWCRCEPSNEVHCVVADCA 153
                  K     CEY+G  Y+  E F         +P+ C  C C   N V+C +  C 
Sbjct: 102 SLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCTQCSCSEGN-VYCGLKTCP 160

Query: 154 VPECVNPVYEPEQCCPVCK 172
              C  PV  P+ CC VC+
Sbjct: 161 KLTCAFPVSVPDSCCRVCR 179



 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 30/139 (21%)

Query: 104 GCCPECKEVKNFCEYHGKNYKILEEFKP--SP-----CEWCRCEPSNEVHCVVADCAVPE 156
           G   + K  + +C +  K Y++ E + P   P     C  C C  +  V C    C    
Sbjct: 25  GKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH 84

Query: 157 CVNPVYEPEQCCPVCK-----------------NGPNCFAGTTIIPAGI--EVKVDECNI 197
           C++PV+ P  CCP C                  NG     G   +  G+    + ++C  
Sbjct: 85  CLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCTQ 144

Query: 198 CHCHNGDWWKPAQCSKREC 216
           C C  G+      C  + C
Sbjct: 145 CSCSEGN----VYCGLKTC 159


>gi|221316563 chordin-like 1 isoform 2 precursor [Homo sapiens]
          Length = 457

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 30/139 (21%)

Query: 61  YKLGERFFP-----GHSNCP-CVCALDGPV-CDQPECPKIHPKCTKVEH--NGCCPEC-- 109
           Y++GER+ P     G   C  C+C+ +G V C +  CP +H  C    H  + CCP C  
Sbjct: 44  YRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH--CLSPVHIPHLCCPRCPD 101

Query: 110 -------KEVKNFCEYHGKNYKILEEF---------KPSPCEWCRCEPSNEVHCVVADCA 153
                  K     CEY+G  Y+  E F         +P+ C  C C   N V+C +  C 
Sbjct: 102 SLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCTQCSCSEGN-VYCGLKTCP 160

Query: 154 VPECVNPVYEPEQCCPVCK 172
              C  PV  P+ CC VC+
Sbjct: 161 KLTCAFPVSVPDSCCRVCR 179



 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 30/139 (21%)

Query: 104 GCCPECKEVKNFCEYHGKNYKILEEFKP--SP-----CEWCRCEPSNEVHCVVADCAVPE 156
           G   + K  + +C +  K Y++ E + P   P     C  C C  +  V C    C    
Sbjct: 25  GKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH 84

Query: 157 CVNPVYEPEQCCPVCK-----------------NGPNCFAGTTIIPAGI--EVKVDECNI 197
           C++PV+ P  CCP C                  NG     G   +  G+    + ++C  
Sbjct: 85  CLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCTQ 144

Query: 198 CHCHNGDWWKPAQCSKREC 216
           C C  G+      C  + C
Sbjct: 145 CSCSEGN----VYCGLKTC 159


>gi|221316561 chordin-like 1 isoform 1 precursor [Homo sapiens]
          Length = 458

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 31/140 (22%)

Query: 61  YKLGERFFP-----GHSNCP-CVCALDGPV-CDQPECPKIHPKCTKVEH--NGCCPECKE 111
           Y++GER+ P     G   C  C+C+ +G V C +  CP +H  C    H  + CCP C E
Sbjct: 44  YRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH--CLSPVHIPHLCCPRCPE 101

Query: 112 ----------VKNFCEYHGKNYKILEEF---------KPSPCEWCRCEPSNEVHCVVADC 152
                         CEY+G  Y+  E F         +P+ C  C C   N V+C +  C
Sbjct: 102 DSLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCTQCSCSEGN-VYCGLKTC 160

Query: 153 AVPECVNPVYEPEQCCPVCK 172
               C  PV  P+ CC VC+
Sbjct: 161 PKLTCAFPVSVPDSCCRVCR 180



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 31/140 (22%)

Query: 104 GCCPECKEVKNFCEYHGKNYKILEEFKP--SP-----CEWCRCEPSNEVHCVVADCAVPE 156
           G   + K  + +C +  K Y++ E + P   P     C  C C  +  V C    C    
Sbjct: 25  GKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH 84

Query: 157 CVNPVYEPEQCCPVCK------------------NGPNCFAGTTIIPAGI--EVKVDECN 196
           C++PV+ P  CCP C                   NG     G   +  G+    + ++C 
Sbjct: 85  CLSPVHIPHLCCPRCPEDSLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCT 144

Query: 197 ICHCHNGDWWKPAQCSKREC 216
            C C  G+      C  + C
Sbjct: 145 QCSCSEGN----VYCGLKTC 160


>gi|108773804 Fraser syndrome 1 [Homo sapiens]
          Length = 4011

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 43/139 (30%), Positives = 58/139 (41%), Gaps = 10/139 (7%)

Query: 84  VCDQPECPKIHPKCTKVEHNGCCPEC-KEVKNFCEYHGKNYKILEEFKPSPCEWCRCEPS 142
           VC  P+C     +  ++  N CCPEC       C +  K ++   E+  SPC  C C   
Sbjct: 62  VCRNPQCAFEKGEVLQIAANQCCPECVLRTPGSCHHEKKIHEHGTEWASSPCSVCSCN-H 120

Query: 143 NEVHCVVADCAVPECVNP--VYEPE-QCCPVCKN-GPNCFAGTTIIPAGIEVKVDECNIC 198
            EV C    C    C +    + PE  CCPVC   G  C     +   G + ++  C  C
Sbjct: 121 GEVRCTPQPCPPLSCGHQELAFIPEGSCCPVCVGLGKPCSYEGHVFQDGEDWRLSRCAKC 180

Query: 199 HCHNGDWWKPAQCSKRECQ 217
            C NG     AQC   +CQ
Sbjct: 181 LCRNG----VAQCFTAQCQ 195



 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 19/174 (10%)

Query: 57  SGFVYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVE-----HNGCCPECKE 111
           +G VY+ GE++   ++   C+C      C +  C  +  +C K +     H  CC EC  
Sbjct: 224 AGQVYEHGEQWSE-NACTTCICDRGEVRCHKQACLPL--RCGKGQSRARRHGQCCEECVS 280

Query: 112 VKNFCEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNP---VYEPEQCC 168
               C Y G      E +K S CE+C C+   +V C   +CA  EC      ++   +CC
Sbjct: 281 PAGSCSYDGVVRYQDEMWKGSACEFCMCD-HGQVTCQTGECAKVECARDEELIHLDGKCC 339

Query: 169 PVC--KNGPNCFAGTTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQGKQ 220
           P C  +NG   +  T     G  +  +   +     G+ W+   C   EC+G Q
Sbjct: 340 PECISRNGYCVYEET-----GEFMSSNASEVKRIPEGEKWEDGPCKVCECRGAQ 388



 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 15/154 (9%)

Query: 72  SNCPC-VCALD-GPV-CDQPECPKI---HPKCTKVEHNGCCPECKEVKNFCEYHGKNYKI 125
           ++ PC VC+ + G V C    CP +   H +   +    CCP C  +   C Y G  ++ 
Sbjct: 109 ASSPCSVCSCNHGEVRCTPQPCPPLSCGHQELAFIPEGSCCPVCVGLGKPCSYEGHVFQD 168

Query: 126 LEEFKPSPCEWCRCEPSNEVHCVVADCAVPEC---VNPVYEPEQCCPVCKNGPNCFAGTT 182
            E+++ S C  C C  +    C  A C    C      V  P +CCP C +  +C A   
Sbjct: 169 GEDWRLSRCAKCLCR-NGVAQCFTAQCQPLFCNQDETVVRVPGKCCPQC-SARSCSAAGQ 226

Query: 183 IIPAGIEVKVDECNICHCHNGDWWKPAQCSKREC 216
           +   G +   + C  C C  G+     +C K+ C
Sbjct: 227 VYEHGEQWSENACTTCICDRGE----VRCHKQAC 256



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 12/95 (12%)

Query: 129 FKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYE-----PEQCCPVC--KNGPNCFAGT 181
           +KP  C+ CRC   + V C  A C  P+C     E       QCCP C  +   +C    
Sbjct: 41  WKPDSCQSCRCH-GDIVICKPAVCRNPQCAFEKGEVLQIAANQCCPECVLRTPGSCHHEK 99

Query: 182 TIIPAGIEVKVDECNICHCHNGDWWKPAQCSKREC 216
            I   G E     C++C C++G+     +C+ + C
Sbjct: 100 KIHEHGTEWASSPCSVCSCNHGE----VRCTPQPC 130



 Score = 28.1 bits (61), Expect = 6.2
 Identities = 32/147 (21%), Positives = 48/147 (32%), Gaps = 43/147 (29%)

Query: 64  GERFFPGHSNCPC-VCALDGP--VCDQPECP-------------KIHPKCTKVEHNGCCP 107
           GE++  G    PC VC   G    C +P CP             +  P CT V  +  C 
Sbjct: 371 GEKWEDG----PCKVCECRGAQVTCYEPSCPPCPVGTLALEVKGQCCPDCTSVHCHPDCL 426

Query: 108 ECKEVKNFCEYHGKNYKILEE----------FKPSPCEWCRCEPSNEVHCVVADCA---- 153
            C +  + C+      K+L+           F  +      C+P         +C+    
Sbjct: 427 TCSQSPDHCDLCQDPTKLLQNGWCVHSCGLGFYQAGSLCLACQPQCSTCTSGLECSSCQP 486

Query: 154 ---------VPECVNPVYEPEQCCPVC 171
                    VP C +  Y+    C VC
Sbjct: 487 PLLMRHGQCVPTCGDGFYQDRHSCAVC 513


>gi|40353769 chordin-like 2 [Homo sapiens]
          Length = 451

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 32/141 (22%)

Query: 64  GERFFPGHSNCP------------CVCALDGPV-CDQPECPKIHPKCTKVEHNGCCPECK 110
           G+R+ PG S  P            C C+    V C +  CP +H      E   CCP+C 
Sbjct: 37  GKRYSPGESWHPYLEPQGLMYCLRCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQCCPKCV 96

Query: 111 EVKN---------FCEYHGKNYKILEEFK---------PSPCEWCRCEPSNEVHCVVADC 152
           E             C+++G  Y+  E F          P+ C  C C    +++C +  C
Sbjct: 97  EPHTPSGLRAPPKSCQHNGTMYQHGEIFSAHELFPSRLPNQCVLCSCT-EGQIYCGLTTC 155

Query: 153 AVPECVNPVYEPEQCCPVCKN 173
             P C  P+  P+ CC  CK+
Sbjct: 156 PEPGCPAPLPLPDSCCQACKD 176



 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 19/100 (19%)

Query: 115 FCEYHGKNYKILEEFKP-------SPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQC 167
           FC +HGK Y   E + P         C  C C     V C    C    C  PV EP+QC
Sbjct: 32  FCLFHGKRYSPGESWHPYLEPQGLMYCLRCTCSEGAHVSCYRLHCPPVHCPQPVTEPQQC 91

Query: 168 CPVCKNGPNCFAGTTIIPAGIEVKVDECNICHCHNGDWWK 207
           CP C   P+        P+G+      C     HNG  ++
Sbjct: 92  CPKCVE-PH-------TPSGLRAPPKSCQ----HNGTMYQ 119



 Score = 31.6 bits (70), Expect = 0.56
 Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 113 KNFCEYHGKNYK-------ILEEFKPSPCEWCRCEPSNEVHCVVADCAVP-ECVNPVYEP 164
           K  C + GK Y            F P PC  C CE   +  C    C     C +P    
Sbjct: 249 KKACVHGGKTYSHGEVWHPAFRAFGPLPCILCTCEDGRQ-DCQRVTCPTEYPCRHPEKVA 307

Query: 165 EQCCPVC 171
            +CC +C
Sbjct: 308 GKCCKIC 314


>gi|10092639 cysteine-rich motor neuron 1 [Homo sapiens]
          Length = 1036

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 6/123 (4%)

Query: 53  CVDDSGFVYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKE- 111
           C +D G ++   E + P      C+C      C    CP +  +   +    CCP C E 
Sbjct: 753 CKNDEGDIFLAAESWKPDVCTS-CICIDSVISCFSESCPSVSCERPVLRKGQCCPYCIED 811

Query: 112 ---VKNFCEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCC 168
               K  C + GK Y   E +    C  C C     + C    C    CV P+     CC
Sbjct: 812 TIPKKVVCHFSGKAYADEERWDLDSCTHCYCLQGQTL-CSTVSCPPLPCVEPINVEGSCC 870

Query: 169 PVC 171
           P+C
Sbjct: 871 PMC 873



 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 46/177 (25%), Positives = 63/177 (35%), Gaps = 30/177 (16%)

Query: 64  GERFFPGHS----NCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKE------- 111
           GE F  G +    +C  C C     +C+   CP +  +      + CCP+C +       
Sbjct: 684 GEYFVEGETWNIDSCTQCTCHSGRVLCETEVCPPLLCQNPSRTQDSCCPQCTDQPFRPSL 743

Query: 112 -----VKNFCEY-HGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPE 165
                V N+C+   G  +   E +KP  C  C C  S  + C    C    C  PV    
Sbjct: 744 SRNNSVPNYCKNDEGDIFLAAESWKPDVCTSCICIDS-VISCFSESCPSVSCERPVLRKG 802

Query: 166 QCCPVC------KNGPNCFAGTTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKREC 216
           QCCP C      K     F+G           +D C  C+C  G       CS   C
Sbjct: 803 QCCPYCIEDTIPKKVVCHFSGKAYADEE-RWDLDSCTHCYCLQGQ----TLCSTVSC 854



 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 73  NCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKE-VKNF-----CEYHGKNYKI 125
           NC  C C     +C   +C +I+ +   V    CCP C++ V  F     C  +G     
Sbjct: 353 NCRFCRCQGGVAICFTAQCGEINCERYYVPEGECCPVCEDPVYPFNNPAGCYANGLILAH 412

Query: 126 LEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNG----------- 174
            + ++   C +C+C  + E HCV   C    C NPV  P +CCPVC+             
Sbjct: 413 GDRWREDDCTFCQCV-NGERHCVATVCG-QTCTNPVKVPGECCPVCEEPTIITVDPPACG 470

Query: 175 --PNCFAGTTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKRE 215
              NC         G +   + C  C C N +      CS+R+
Sbjct: 471 ELSNCTLTGKDCINGFKRDHNGCRTCQCINTE----ELCSERK 509



 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 31/145 (21%)

Query: 85  CDQPECPKIHPKCTKVEHNGCCP-ECKE---------VKNFC----EYHGKNYKILEEFK 130
           C +  C KI P   + + +GC   +C+E         +   C     +H KN    EE  
Sbjct: 567 CPELSCSKICPLGFQQDSHGCLICKCREASASAGPPILSGTCLTVDGHHHKN----EESW 622

Query: 131 PSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNG----------PN-CFA 179
              C  C C    E+ C +  C VP C NP   P QCCP C +           P+ C A
Sbjct: 623 HDGCRECYCLNGREM-CALITCPVPACGNPTIHPGQCCPSCADDFVVQKPELSTPSICHA 681

Query: 180 -GTTIIPAGIEVKVDECNICHCHNG 203
            G      G    +D C  C CH+G
Sbjct: 682 PGGEYFVEGETWNIDSCTQCTCHSG 706



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 34/156 (21%), Positives = 46/156 (29%), Gaps = 37/156 (23%)

Query: 82  GPVCDQPECPKIHP------KCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKPSPCE 135
           G  CD  EC  +        +C  V+   C P+             +Y+         C 
Sbjct: 239 GECCDLYECKPVFGVDCRTVECPPVQQTACPPD-------------SYETQVRLTADGC- 284

Query: 136 WCRCEPSNEVHCVVADCAVPECV---------NPVYEPEQCCPV--CKNG--PNCFAGTT 182
              C       C+   C  P C               P +CC V  C N   P C     
Sbjct: 285 ---CTLPTRCECLSGLCGFPVCEVGSTPRIVSRGDGTPGKCCDVFECVNDTKPACVFNNV 341

Query: 183 IIPAGIEVKVDECNICHCHNG-DWWKPAQCSKRECQ 217
               G   ++D C  C C  G      AQC +  C+
Sbjct: 342 EYYDGDMFRMDNCRFCRCQGGVAICFTAQCGEINCE 377


>gi|37693519 BMP-binding endothelial regulator precursor protein
           [Homo sapiens]
          Length = 685

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 31/153 (20%)

Query: 76  CVCALDGPVCDQPECPKIHPKCTKV--EHNGCCPECKEVKNFCEYHGKNYKILEEFK-PS 132
           CVC      C + +CP +   C     +   CC +CK     C Y G  Y     FK  S
Sbjct: 70  CVCLNKEVTCKREKCPVLSRDCALAIKQRGACCEQCKG----CTYEGNTYN--SSFKWQS 123

Query: 133 PCEWCRCEPSNE-------VHCVVADCAVPECVNPVYEPEQCCPVCKNGPNCFAGTTIIP 185
           P E C      E       V CVV       C NP+     CCP C   P C        
Sbjct: 124 PAEPCVLRQCQEGVVTESGVRCVV------HCKNPLEHLGMCCPTC---PGCVFEGVQYQ 174

Query: 186 AGIEVKVD--ECNICHCHNGDWWKPAQCSKREC 216
            G E + +  +C  C C  G      QC +  C
Sbjct: 175 EGEEFQPEGSKCTKCSCTGG----RTQCVREVC 203



 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 43/153 (28%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 75  PCVC--ALDGPVCDQPECPKIHPKCTKVEHNG-CCPECKEVKNFCEYHGKNYKILEEFKP 131
           PCV     +G V +      +H K   +EH G CCP C      C + G  Y+  EEF+P
Sbjct: 127 PCVLRQCQEGVVTESGVRCVVHCK-NPLEHLGMCCPTCPG----CVFEGVQYQEGEEFQP 181

Query: 132 --SPCEWCRCEPSNEVHCVVADCAVPECVNPVYE--PEQCCPVCKNG--------PNCFA 179
             S C  C C       CV   C +  C   +    P QCCP C            +C  
Sbjct: 182 EGSKCTKCSCT-GGRTQCVREVCPILSCPQHLSHIPPGQCCPKCLGQRKVFDLPFGSCLF 240

Query: 180 GTTIIPAGIEVKVDECNICHCHNGDWWKPAQCS 212
            + +   G     D C  C C +       +CS
Sbjct: 241 RSDVYDNGSSFLYDNCTACTCRDSTVVCKRKCS 273



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 60  VYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPEC-----KEVKN 114
           VY  G  F   + NC      D  V  + +C   HP        GCC EC      E   
Sbjct: 244 VYDNGSSFL--YDNCTACTCRDSTVVCKRKCS--HPGGCDQGQEGCCEECLLRVPPEDIK 299

Query: 115 FCEYHGKNYKILEEFKPSPCEWCRC-----EPSNEVHCVVADCAVPECVNPVYEPEQCCP 169
            C++  K ++  E +    C  C C     E  N+    ++ C   + +N     + CCP
Sbjct: 300 VCKFGNKIFQDGEMWSSINCTICACVKGRTECRNKQCIPISSCPQGKILN----RKGCCP 355

Query: 170 VCKNGP 175
           +C   P
Sbjct: 356 ICTEKP 361



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 60  VYKLGERFFPGHS-----NCP-CVCALDGPVCDQPECPKIH--PKCTKVEHNGCCPECKE 111
           V K G + F         NC  C C      C   +C  I   P+   +   GCCP C E
Sbjct: 300 VCKFGNKIFQDGEMWSSINCTICACVKGRTECRNKQCIPISSCPQGKILNRKGCCPICTE 359

Query: 112 VKNFCEYHG 120
               C   G
Sbjct: 360 KPGVCTVFG 368


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 116 CEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCA-VPECVNPVYEPEQCCPVCKNG 174
           C  +G+ Y   + +KP+PC+ C C+ +  + C   +C  V +C +PV  P +CCPVC   
Sbjct: 41  CTQNGQMYLNRDIWKPAPCQICVCD-NGAILCDKIECQDVLDCADPVTPPGECCPVCSQT 99

Query: 175 P 175
           P
Sbjct: 100 P 100



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 17/103 (16%)

Query: 10  ILLLVIPGLVTSAAISHEDYPADEGDQISSNDNLIFDDYRGKGCVDDSGFVYKLGERFFP 69
           ++L+V+ G   S     ED     G++I+   N               G +Y   + + P
Sbjct: 12  LILIVLLGQFVSIKAQEEDEDEGYGEEIACTQN---------------GQMYLNRDIWKP 56

Query: 70  GHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNG-CCPECKE 111
                 CVC     +CD+ EC  +      V   G CCP C +
Sbjct: 57  APCQI-CVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQ 98


>gi|223029476 NEL-like protein 2 isoform d [Homo sapiens]
          Length = 839

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 58  GFVYKLGERFFPGHSNCPCV---CALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKN 114
           G  Y+  E +  G  NC C+      +  +C  P+CP    K      +G C  CKE K+
Sbjct: 301 GTTYREFESWIDGCKNCTCLNGTIQCETLICPNPDCPL---KSALAYVDGKC--CKECKS 355

Query: 115 FCEYHGKNYKILEE----FKPSPCEWCRCEPSNEVHCVVADCAVPEC--VNPVYEPEQCC 168
            C++ G+ Y   E          C    C+         + C   +C   + +     CC
Sbjct: 356 ICQFQGRTYFEGERNTVYSSSGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCC 415

Query: 169 PVCKNGPNCFAGTTIIPAGIEVKVDECNICHCHNG 203
            VCK    C      +   I   +++  +C C +G
Sbjct: 416 KVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDG 450



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 45/222 (20%)

Query: 17  GLVTSAAISHEDYP-ADEGDQISSNDNLIFD-----DYR---GKGCVDD---SGFVYKLG 64
           G+ + +  S ED      G    +ND + F+     D R   GK C  D    G V   G
Sbjct: 614 GMFSPSGESCEDIDECGTGRHSCANDTICFNLDGGYDCRCPHGKNCTGDCIHDGKVKHNG 673

Query: 65  ERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK-EVKNFCEY-HGK 121
           + +   +  C  C C     +C +  C   +P         CCPEC   + + C + +G+
Sbjct: 674 QIWVLENDRCSVCSCQNGFVMCRRMVCDCENPTVDLF----CCPECDPRLSSQCLHQNGE 729

Query: 122 NYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP------ 175
                 +     C+ CRC    EV C    C   EC   +    +CCP C   P      
Sbjct: 730 TLYNSGDTWVQNCQQCRCL-QGEVDCWPLPCPDVECEFSILPENECCPRCVTDPCQADTI 788

Query: 176 ------NC--------FAGTTIIPAGIEVKVDECNICHCHNG 203
                  C        F G++ I  G      EC +C C NG
Sbjct: 789 RNDITKTCLDEMNVVRFTGSSWIKHG-----TECTLCQCKNG 825


>gi|223029474 NEL-like protein 2 isoform c [Homo sapiens]
          Length = 815

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 58  GFVYKLGERFFPGHSNCPCV---CALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKN 114
           G  Y+  E +  G  NC C+      +  +C  P+CP    K      +G C  CKE K+
Sbjct: 277 GTTYREFESWIDGCKNCTCLNGTIQCETLICPNPDCPL---KSALAYVDGKC--CKECKS 331

Query: 115 FCEYHGKNYKILEE----FKPSPCEWCRCEPSNEVHCVVADCAVPEC--VNPVYEPEQCC 168
            C++ G+ Y   E          C    C+         + C   +C   + +     CC
Sbjct: 332 ICQFQGRTYFEGERNTVYSSSGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCC 391

Query: 169 PVCKNGPNCFAGTTIIPAGIEVKVDECNICHCHNG 203
            VCK    C      +   I   +++  +C C +G
Sbjct: 392 KVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDG 426



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 45/222 (20%)

Query: 17  GLVTSAAISHEDYP-ADEGDQISSNDNLIFD-----DYR---GKGCVDD---SGFVYKLG 64
           G+ + +  S ED      G    +ND + F+     D R   GK C  D    G V   G
Sbjct: 590 GMFSPSGESCEDIDECGTGRHSCANDTICFNLDGGYDCRCPHGKNCTGDCIHDGKVKHNG 649

Query: 65  ERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK-EVKNFCEY-HGK 121
           + +   +  C  C C     +C +  C   +P         CCPEC   + + C + +G+
Sbjct: 650 QIWVLENDRCSVCSCQNGFVMCRRMVCDCENPTVDLF----CCPECDPRLSSQCLHQNGE 705

Query: 122 NYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP------ 175
                 +     C+ CRC    EV C    C   EC   +    +CCP C   P      
Sbjct: 706 TLYNSGDTWVQNCQQCRCL-QGEVDCWPLPCPDVECEFSILPENECCPRCVTDPCQADTI 764

Query: 176 ------NC--------FAGTTIIPAGIEVKVDECNICHCHNG 203
                  C        F G++ I  G      EC +C C NG
Sbjct: 765 RNDITKTCLDEMNVVRFTGSSWIKHG-----TECTLCQCKNG 801


>gi|223029472 NEL-like protein 2 isoform b precursor [Homo sapiens]
          Length = 816

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 58  GFVYKLGERFFPGHSNCPCV---CALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKN 114
           G  Y+  E +  G  NC C+      +  +C  P+CP    K      +G C  CKE K+
Sbjct: 278 GTTYREFESWIDGCKNCTCLNGTIQCETLICPNPDCPL---KSALAYVDGKC--CKECKS 332

Query: 115 FCEYHGKNYKILEE----FKPSPCEWCRCEPSNEVHCVVADCAVPEC--VNPVYEPEQCC 168
            C++ G+ Y   E          C    C+         + C   +C   + +     CC
Sbjct: 333 ICQFQGRTYFEGERNTVYSSSGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCC 392

Query: 169 PVCKNGPNCFAGTTIIPAGIEVKVDECNICHCHNG 203
            VCK    C      +   I   +++  +C C +G
Sbjct: 393 KVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDG 427



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 45/222 (20%)

Query: 17  GLVTSAAISHEDYP-ADEGDQISSNDNLIFD-----DYR---GKGCVDD---SGFVYKLG 64
           G+ + +  S ED      G    +ND + F+     D R   GK C  D    G V   G
Sbjct: 591 GMFSPSGESCEDIDECGTGRHSCANDTICFNLDGGYDCRCPHGKNCTGDCIHDGKVKHNG 650

Query: 65  ERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK-EVKNFCEY-HGK 121
           + +   +  C  C C     +C +  C   +P         CCPEC   + + C + +G+
Sbjct: 651 QIWVLENDRCSVCSCQNGFVMCRRMVCDCENPTVDLF----CCPECDPRLSSQCLHQNGE 706

Query: 122 NYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP------ 175
                 +     C+ CRC    EV C    C   EC   +    +CCP C   P      
Sbjct: 707 TLYNSGDTWVQNCQQCRCL-QGEVDCWPLPCPDVECEFSILPENECCPRCVTDPCQADTI 765

Query: 176 ------NC--------FAGTTIIPAGIEVKVDECNICHCHNG 203
                  C        F G++ I  G      EC +C C NG
Sbjct: 766 RNDITKTCLDEMNVVRFTGSSWIKHG-----TECTLCQCKNG 802


>gi|223029470 NEL-like protein 2 isoform a [Homo sapiens]
          Length = 866

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 58  GFVYKLGERFFPGHSNCPCV---CALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKN 114
           G  Y+  E +  G  NC C+      +  +C  P+CP    K      +G C  CKE K+
Sbjct: 328 GTTYREFESWIDGCKNCTCLNGTIQCETLICPNPDCPL---KSALAYVDGKC--CKECKS 382

Query: 115 FCEYHGKNYKILEE----FKPSPCEWCRCEPSNEVHCVVADCAVPEC--VNPVYEPEQCC 168
            C++ G+ Y   E          C    C+         + C   +C   + +     CC
Sbjct: 383 ICQFQGRTYFEGERNTVYSSSGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCC 442

Query: 169 PVCKNGPNCFAGTTIIPAGIEVKVDECNICHCHNG 203
            VCK    C      +   I   +++  +C C +G
Sbjct: 443 KVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDG 477



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 45/222 (20%)

Query: 17  GLVTSAAISHEDYP-ADEGDQISSNDNLIFD-----DYR---GKGCVDD---SGFVYKLG 64
           G+ + +  S ED      G    +ND + F+     D R   GK C  D    G V   G
Sbjct: 641 GMFSPSGESCEDIDECGTGRHSCANDTICFNLDGGYDCRCPHGKNCTGDCIHDGKVKHNG 700

Query: 65  ERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK-EVKNFCEY-HGK 121
           + +   +  C  C C     +C +  C   +P         CCPEC   + + C + +G+
Sbjct: 701 QIWVLENDRCSVCSCQNGFVMCRRMVCDCENPTVDLF----CCPECDPRLSSQCLHQNGE 756

Query: 122 NYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP------ 175
                 +     C+ CRC    EV C    C   EC   +    +CCP C   P      
Sbjct: 757 TLYNSGDTWVQNCQQCRCL-QGEVDCWPLPCPDVECEFSILPENECCPRCVTDPCQADTI 815

Query: 176 ------NC--------FAGTTIIPAGIEVKVDECNICHCHNG 203
                  C        F G++ I  G      EC +C C NG
Sbjct: 816 RNDITKTCLDEMNVVRFTGSSWIKHG-----TECTLCQCKNG 852


>gi|5453766 NEL-like protein 2 isoform b precursor [Homo sapiens]
          Length = 816

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 58  GFVYKLGERFFPGHSNCPCV---CALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKN 114
           G  Y+  E +  G  NC C+      +  +C  P+CP    K      +G C  CKE K+
Sbjct: 278 GTTYREFESWIDGCKNCTCLNGTIQCETLICPNPDCPL---KSALAYVDGKC--CKECKS 332

Query: 115 FCEYHGKNYKILEE----FKPSPCEWCRCEPSNEVHCVVADCAVPEC--VNPVYEPEQCC 168
            C++ G+ Y   E          C    C+         + C   +C   + +     CC
Sbjct: 333 ICQFQGRTYFEGERNTVYSSSGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCC 392

Query: 169 PVCKNGPNCFAGTTIIPAGIEVKVDECNICHCHNG 203
            VCK    C      +   I   +++  +C C +G
Sbjct: 393 KVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDG 427



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 45/222 (20%)

Query: 17  GLVTSAAISHEDYP-ADEGDQISSNDNLIFD-----DYR---GKGCVDD---SGFVYKLG 64
           G+ + +  S ED      G    +ND + F+     D R   GK C  D    G V   G
Sbjct: 591 GMFSPSGESCEDIDECGTGRHSCANDTICFNLDGGYDCRCPHGKNCTGDCIHDGKVKHNG 650

Query: 65  ERFFPGHSNCP-CVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECK-EVKNFCEY-HGK 121
           + +   +  C  C C     +C +  C   +P         CCPEC   + + C + +G+
Sbjct: 651 QIWVLENDRCSVCSCQNGFVMCRRMVCDCENPTVDLF----CCPECDPRLSSQCLHQNGE 706

Query: 122 NYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNGP------ 175
                 +     C+ CRC    EV C    C   EC   +    +CCP C   P      
Sbjct: 707 TLYNSGDTWVQNCQQCRCL-QGEVDCWPLPCPDVECEFSILPENECCPRCVTDPCQADTI 765

Query: 176 ------NC--------FAGTTIIPAGIEVKVDECNICHCHNG 203
                  C        F G++ I  G      EC +C C NG
Sbjct: 766 RNDITKTCLDEMNVVRFTGSSWIKHG-----TECTLCQCKNG 802


>gi|30089980 chordin [Homo sapiens]
          Length = 955

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 28/108 (25%)

Query: 134 CEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKN----------------GPNC 177
           C  C C+    V C    C  P C +PV  P+QCCPVC                  G  C
Sbjct: 726 CSLCTCQ-RRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGC 784

Query: 178 F---------AGTTIIPAGIEVKVDECNICHCHNGDWWKPAQCSKREC 216
           +         AGT   P      + +C +C C  G       C K +C
Sbjct: 785 YFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGT--GEVHCEKVQC 830



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 36/143 (25%)

Query: 64  GERFFPGH----SNCPC-----VCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKN 114
           G R+ P +    S C C     +C  D  VC  P CP  HP     +    CPE ++V++
Sbjct: 715 GARWAPNYDPLCSLCTCQRRTVIC--DPVVCPPPSCP--HPVQAPDQCCPVCPEKQDVRD 770

Query: 115 F------------CEYHGKN---------YKILEEFKPSPCEWCRCEP-SNEVHCVVADC 152
                        C + G           + ++  F    C  C C+  + EVHC    C
Sbjct: 771 LPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKVQC 830

Query: 153 AVPECVNPV-YEPEQCCPVCKNG 174
               C  PV   P  CC  C  G
Sbjct: 831 PRLACAQPVRVNPTDCCKQCPVG 853



 Score = 30.8 bits (68), Expect = 0.96
 Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 19/75 (25%)

Query: 116 CEYHGKNYKILEEFKPS--------PCEWCRCEPSN---------EVHC--VVADCAVPE 156
           C + GK Y + E + P          C  C CE             V C  +  +C  P 
Sbjct: 51  CTFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRTRGPGRVSCKNIKPECPTPA 110

Query: 157 CVNPVYEPEQCCPVC 171
           C  P   P  CC  C
Sbjct: 111 CGQPRQLPGHCCQTC 125


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 112 VKNFCEYHGKNYKILEEFKPSPCEWCRCEPSNEVHC--VVADCAVPECVNPVYEPEQCCP 169
           V+  C + G++Y   + +KP PC+ C C+ S  V C  ++ D    +C NP     +CC 
Sbjct: 28  VEGGCSHLGQSYADRDVWKPEPCQICVCD-SGSVLCDDIICDDQELDCPNPEIPFGECCA 86

Query: 170 VCKNGP 175
           VC   P
Sbjct: 87  VCPQPP 92


>gi|221316568 chordin-like 1 isoform 4 precursor [Homo sapiens]
          Length = 377

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 104 GCCPECKEVKNFCEYHGKNYKILEEFKP--SP-----CEWCRCEPSNEVHCVVADCAVPE 156
           G   + K  + +C +  K Y++ E + P   P     C  C C  +  V C    C    
Sbjct: 25  GKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNVH 84

Query: 157 CVNPVYEPEQCCPVC 171
           C++PV+ P  CCP C
Sbjct: 85  CLSPVHIPHLCCPRC 99


>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
          Length = 517

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 41/143 (28%), Positives = 52/143 (36%), Gaps = 39/143 (27%)

Query: 76  CVCALDGPVCDQPECPK---IHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKPS 132
           C  +  GP C QP CP      P C   +   C P C  V + C+             P 
Sbjct: 49  CGSSSCGPQCRQPSCPVSSCAQPLC--CDPVICEPSC-SVSSGCQ-------------PV 92

Query: 133 PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNG----PNCFAGTTIIPAGI 188
            CE   CEPS    C V++C  P C    +E   C P C       P CF  T   P+  
Sbjct: 93  CCEATTCEPS----CSVSNCYQPVC----FEATICEPSCSVSNCCQPVCFEATVCEPS-- 142

Query: 189 EVKVDECNICHCHNGDWWKPAQC 211
                 C++  C      +PA C
Sbjct: 143 ------CSVSSCAQPVCCEPAIC 159



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 46/167 (27%), Positives = 59/167 (35%), Gaps = 38/167 (22%)

Query: 72  SNCPCVCALDGPVCDQPECPK---IHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEE 128
           SNC      +  VC+ P C       P C   E   C P C  V + C+  G      + 
Sbjct: 126 SNCCQPVCFEATVCE-PSCSVSSCAQPVCC--EPAICEPSCS-VSSCCQPVGSEATSCQP 181

Query: 129 F------------KPSPCEWCRCEPSNEVHCVVADCAVPECVNPVY-EPEQCCPVCKNGP 175
                        K S C+   CEPS    C  A C +P    PV  EP  C PVC   P
Sbjct: 182 VLCVPTSCQPVLCKSSCCQPVVCEPS----CCSAVCTLPSSCQPVVCEPSCCQPVCPT-P 236

Query: 176 NCFAGTT-----IIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQ 217
            C   ++       P+  E    E +IC        +PA C    C+
Sbjct: 237 TCSVTSSCQAVCCDPSPCEPSCSESSIC--------QPATCVALVCE 275



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 30/145 (20%)

Query: 72  SNCPCVCALDGPVCDQPECPKI---HPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEE 128
           + C   C++    C QP C +     P C+    N C P C E    CE    +  +   
Sbjct: 97  TTCEPSCSVSN--CYQPVCFEATICEPSCSV--SNCCQPVCFEA-TVCE---PSCSVSSC 148

Query: 129 FKPSPCEWCRCEPSNEVHCVVADCA---------------VPECVNPVYEPEQCCPVCKN 173
            +P  CE   CEPS    C V+ C                VP    PV     CC     
Sbjct: 149 AQPVCCEPAICEPS----CSVSSCCQPVGSEATSCQPVLCVPTSCQPVLCKSSCCQPVVC 204

Query: 174 GPNCFAGTTIIPAGIEVKVDECNIC 198
            P+C +    +P+  +  V E + C
Sbjct: 205 EPSCCSAVCTLPSSCQPVVCEPSCC 229



 Score = 30.8 bits (68), Expect = 0.96
 Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 35/137 (25%)

Query: 72  SNC-PCVCALDGPVCDQPECP----KIHPKCTKV--EHNGCCPECKEVKNFCEYHGKNYK 124
           S+C P VC    P C QP CP     +   C  V  + + C P C E  + C+       
Sbjct: 217 SSCQPVVCE---PSCCQPVCPTPTCSVTSSCQAVCCDPSPCEPSCSE-SSICQPATCVAL 272

Query: 125 ILEE--FKPSPCEWCRCEPSN------EVHCVVADCAVPECVNP---------------- 160
           + E    +P  C    CEP +      E  C V+    P C  P                
Sbjct: 273 VCEPVCLRPVCCVQSSCEPPSVPSTCQEPSCCVSSICQPICSEPSPCSPAVCVSSPCQPT 332

Query: 161 VYEPEQCCPVCKNGPNC 177
            Y  ++C  VC    +C
Sbjct: 333 CYVVKRCPSVCPEPVSC 349


>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
           sapiens]
          Length = 517

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 41/143 (28%), Positives = 52/143 (36%), Gaps = 39/143 (27%)

Query: 76  CVCALDGPVCDQPECPK---IHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKPS 132
           C  +  GP C QP CP      P C   +   C P C  V + C+             P 
Sbjct: 49  CGSSSCGPQCRQPSCPVSSCAQPLC--CDPVICEPSC-SVSSGCQ-------------PV 92

Query: 133 PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNG----PNCFAGTTIIPAGI 188
            CE   CEPS    C V++C  P C    +E   C P C       P CF  T   P+  
Sbjct: 93  CCEATTCEPS----CSVSNCYQPVC----FEATICEPSCSVSNCCQPVCFEATVCEPS-- 142

Query: 189 EVKVDECNICHCHNGDWWKPAQC 211
                 C++  C      +PA C
Sbjct: 143 ------CSVSSCAQPVCCEPAIC 159



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 46/167 (27%), Positives = 59/167 (35%), Gaps = 38/167 (22%)

Query: 72  SNCPCVCALDGPVCDQPECPK---IHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEE 128
           SNC      +  VC+ P C       P C   E   C P C  V + C+  G      + 
Sbjct: 126 SNCCQPVCFEATVCE-PSCSVSSCAQPVCC--EPAICEPSCS-VSSCCQPVGSEATSCQP 181

Query: 129 F------------KPSPCEWCRCEPSNEVHCVVADCAVPECVNPVY-EPEQCCPVCKNGP 175
                        K S C+   CEPS    C  A C +P    PV  EP  C PVC   P
Sbjct: 182 VLCVPTSCQPVLCKSSCCQPVVCEPS----CCSAVCTLPSSCQPVVCEPSCCQPVCPT-P 236

Query: 176 NCFAGTT-----IIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQ 217
            C   ++       P+  E    E +IC        +PA C    C+
Sbjct: 237 TCSVTSSCQAVCCDPSPCEPSCSESSIC--------QPATCVALVCE 275



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 30/145 (20%)

Query: 72  SNCPCVCALDGPVCDQPECPKI---HPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEE 128
           + C   C++    C QP C +     P C+    N C P C E    CE    +  +   
Sbjct: 97  TTCEPSCSVSN--CYQPVCFEATICEPSCSV--SNCCQPVCFEA-TVCE---PSCSVSSC 148

Query: 129 FKPSPCEWCRCEPSNEVHCVVADCA---------------VPECVNPVYEPEQCCPVCKN 173
            +P  CE   CEPS    C V+ C                VP    PV     CC     
Sbjct: 149 AQPVCCEPAICEPS----CSVSSCCQPVGSEATSCQPVLCVPTSCQPVLCKSSCCQPVVC 204

Query: 174 GPNCFAGTTIIPAGIEVKVDECNIC 198
            P+C +    +P+  +  V E + C
Sbjct: 205 EPSCCSAVCTLPSSCQPVVCEPSCC 229



 Score = 30.8 bits (68), Expect = 0.96
 Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 35/137 (25%)

Query: 72  SNC-PCVCALDGPVCDQPECP----KIHPKCTKV--EHNGCCPECKEVKNFCEYHGKNYK 124
           S+C P VC    P C QP CP     +   C  V  + + C P C E  + C+       
Sbjct: 217 SSCQPVVCE---PSCCQPVCPTPTCSVTSSCQAVCCDPSPCEPSCSE-SSICQPATCVAL 272

Query: 125 ILEE--FKPSPCEWCRCEPSN------EVHCVVADCAVPECVNP---------------- 160
           + E    +P  C    CEP +      E  C V+    P C  P                
Sbjct: 273 VCEPVCLRPVCCVQSSCEPPSVPSTCQEPSCCVSSICQPICSEPSPCSPAVCVSSPCQPT 332

Query: 161 VYEPEQCCPVCKNGPNC 177
            Y  ++C  VC    +C
Sbjct: 333 CYVVKRCPSVCPEPVSC 349


>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
          Length = 517

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 41/143 (28%), Positives = 52/143 (36%), Gaps = 39/143 (27%)

Query: 76  CVCALDGPVCDQPECPK---IHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKPS 132
           C  +  GP C QP CP      P C   +   C P C  V + C+             P 
Sbjct: 49  CGSSSCGPQCRQPSCPVSSCAQPLC--CDPVICEPSC-SVSSGCQ-------------PV 92

Query: 133 PCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQCCPVCKNG----PNCFAGTTIIPAGI 188
            CE   CEPS    C V++C  P C    +E   C P C       P CF  T   P+  
Sbjct: 93  CCEATTCEPS----CSVSNCYQPVC----FEATICEPSCSVSNCCQPVCFEATICEPS-- 142

Query: 189 EVKVDECNICHCHNGDWWKPAQC 211
                 C++  C      +PA C
Sbjct: 143 ------CSVSSCAQPVCCEPAIC 159



 Score = 37.4 bits (85), Expect = 0.010
 Identities = 45/167 (26%), Positives = 59/167 (35%), Gaps = 38/167 (22%)

Query: 72  SNCPCVCALDGPVCDQPECPK---IHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEE 128
           SNC      +  +C+ P C       P C   E   C P C  V + C+  G      + 
Sbjct: 126 SNCCQPVCFEATICE-PSCSVSSCAQPVCC--EPAICEPSCS-VSSCCQPVGSEATSCQP 181

Query: 129 F------------KPSPCEWCRCEPSNEVHCVVADCAVPECVNPVY-EPEQCCPVCKNGP 175
                        K S C+   CEPS    C  A C +P    PV  EP  C PVC   P
Sbjct: 182 VLCVPTSCQPVLCKSSCCQPVVCEPS----CCSAVCTLPSSCQPVVCEPSCCQPVCPT-P 236

Query: 176 NCFAGTT-----IIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQ 217
            C   ++       P+  E    E +IC        +PA C    C+
Sbjct: 237 TCSVTSSCQAVCCDPSPCEPTCSESSIC--------QPATCVALVCE 275



 Score = 37.0 bits (84), Expect = 0.013
 Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 30/145 (20%)

Query: 72  SNCPCVCALDGPVCDQPECPKI---HPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEE 128
           + C   C++    C QP C +     P C+    N C P C E    CE    +  +   
Sbjct: 97  TTCEPSCSVSN--CYQPVCFEATICEPSCSV--SNCCQPVCFEA-TICE---PSCSVSSC 148

Query: 129 FKPSPCEWCRCEPSNEVHCVVADCA---------------VPECVNPVYEPEQCCPVCKN 173
            +P  CE   CEPS    C V+ C                VP    PV     CC     
Sbjct: 149 AQPVCCEPAICEPS----CSVSSCCQPVGSEATSCQPVLCVPTSCQPVLCKSSCCQPVVC 204

Query: 174 GPNCFAGTTIIPAGIEVKVDECNIC 198
            P+C +    +P+  +  V E + C
Sbjct: 205 EPSCCSAVCTLPSSCQPVVCEPSCC 229



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 35/137 (25%)

Query: 72  SNC-PCVCALDGPVCDQPECP----KIHPKCTKV--EHNGCCPECKEVKNFCEYHGKNYK 124
           S+C P VC    P C QP CP     +   C  V  + + C P C E  + C+       
Sbjct: 217 SSCQPVVCE---PSCCQPVCPTPTCSVTSSCQAVCCDPSPCEPTCSE-SSICQPATCVAL 272

Query: 125 ILEE--FKPSPCEWCRCEPSN------EVHCVVADCAVPECVNP---------------- 160
           + E    +P  C    CEP +      E  C V+    P C  P                
Sbjct: 273 VCEPVCLRPVCCVQSSCEPPSVPSTCQEPSCCVSSICQPICSEPSPCSPAVCVSSPCQPT 332

Query: 161 VYEPEQCCPVCKNGPNC 177
            Y  ++C  VC    +C
Sbjct: 333 CYVVKRCRSVCPEPVSC 349


>gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]
          Length = 598

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 22/149 (14%)

Query: 63  LGERFFPGH---SNCPCVCALDGPV--CDQPECP-----KIHPKCTKVEHNGCCPECKEV 112
           LGE   PG    +NC      D     C   ECP     K   K  K + N  C E    
Sbjct: 379 LGEEKSPGDIWTANCHRGTCTDAKTIDCKPEECPSPPTCKTGEKLVKFQSNDTCCEIGYC 438

Query: 113 K-NFCEYHGKNYKILEEFKP--SPCEWCRCEPSNEVHCVVADCAVPEC---VNPVYEPEQ 166
           +   C ++  +Y+I   F    +PC    C+ +     VV DC         N +Y+ ++
Sbjct: 439 EPRTCLFNNTDYEIGASFDDPSNPCVSYSCKDTGFA-AVVQDCPKQTWCAEANRIYDSKK 497

Query: 167 CCPVCKNGPNC---FAGTTIIPAGIEVKV 192
           CC  CKN  NC       T+I +G + +V
Sbjct: 498 CCYTCKN--NCRSSLVNVTVIYSGCKKRV 524


>gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]
          Length = 598

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 22/149 (14%)

Query: 63  LGERFFPGH---SNCPCVCALDGPV--CDQPECP-----KIHPKCTKVEHNGCCPECKEV 112
           LGE   PG    +NC      D     C   ECP     K   K  K + N  C E    
Sbjct: 379 LGEEKSPGDIWTANCHRGTCTDAKTIDCKPEECPSPPTCKTGEKLVKFQSNDTCCEIGYC 438

Query: 113 K-NFCEYHGKNYKILEEFKP--SPCEWCRCEPSNEVHCVVADCAVPEC---VNPVYEPEQ 166
           +   C ++  +Y+I   F    +PC    C+ +     VV DC         N +Y+ ++
Sbjct: 439 EPRTCLFNNTDYEIGASFDDPSNPCVSYSCKDTGFA-AVVQDCPKQTWCAEANRIYDSKK 497

Query: 167 CCPVCKNGPNC---FAGTTIIPAGIEVKV 192
           CC  CKN  NC       T+I +G + +V
Sbjct: 498 CCYTCKN--NCRSSLVNVTVIYSGCKKRV 524


>gi|239744589 PREDICTED: mucin 19 [Homo sapiens]
          Length = 598

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 22/149 (14%)

Query: 63  LGERFFPGH---SNCPCVCALDGPV--CDQPECP-----KIHPKCTKVEHNGCCPECKEV 112
           LGE   PG    +NC      D     C   ECP     K   K  K + N  C E    
Sbjct: 379 LGEEKSPGDIWTANCHRGTCTDAKTIDCKPEECPSPPTCKTGEKLVKFQSNDTCCEIGYC 438

Query: 113 K-NFCEYHGKNYKILEEFKP--SPCEWCRCEPSNEVHCVVADCAVPEC---VNPVYEPEQ 166
           +   C ++  +Y+I   F    +PC    C+ +     VV DC         N +Y+ ++
Sbjct: 439 EPRTCLFNNTDYEIGASFDDPSNPCVSYSCKDTGFA-AVVQDCPKQTWCAEANRIYDSKK 497

Query: 167 CCPVCKNGPNC---FAGTTIIPAGIEVKV 192
           CC  CKN  NC       T+I +G + +V
Sbjct: 498 CCYTCKN--NCRSSLVNVTVIYSGCKKRV 524


>gi|148833508 notch1 preproprotein [Homo sapiens]
          Length = 2555

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 51/191 (26%), Positives = 68/191 (35%), Gaps = 63/191 (32%)

Query: 70  GHSNCPCVCALDGPVCDQP--ECPKIHPKCTKVEHNGCCP------ECKEVKNFCEYHGK 121
           G + C C     GP C Q   EC      C   EH G C       EC+ ++    Y G 
Sbjct: 394 GKAICTCPSGYTGPACSQDVDECSLGANPC---EHAGKCINTLGSFECQCLQG---YTGP 447

Query: 122 NYKI-LEEFKPSPCE------------WCRCEPSNE-VHCVVA--DCAVPECVNP----- 160
             +I + E   +PC+             C C P  E VHC V   +CA   C++      
Sbjct: 448 RCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLD 507

Query: 161 ------------------VYEPEQCCPV-CKNGPNCFAG----TTIIPAGI-----EVKV 192
                              Y+ ++C    CKNG  C  G    T +   G      EV +
Sbjct: 508 KINEFQCECPTGFTGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDI 567

Query: 193 DECNICHCHNG 203
           DEC+   CH G
Sbjct: 568 DECDPDPCHYG 578



 Score = 28.5 bits (62), Expect = 4.8
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 23/122 (18%)

Query: 70  GHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCE----YHGKNYKI 125
           G   C C     GP C++P  P     C   ++ G C    +V + C     + G+N + 
Sbjct: 200 GSYRCVCRATHTGPNCERPYVPCSPSPC---QNGGTCRPTGDVTHECACLPGFTGQNCE- 255

Query: 126 LEEFKPSPCEWCRCEPSNEVHCV----VADCAVPE------CVNPVYEPEQCCPVCKNGP 175
            E     P   C+    N   CV      +C  P       C   V E +     C+NG 
Sbjct: 256 -ENIDDCPGNNCK----NGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGG 310

Query: 176 NC 177
            C
Sbjct: 311 TC 312



 Score = 28.1 bits (61), Expect = 6.2
 Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 29/132 (21%)

Query: 74  CPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKPSP 133
           C C+    G  C+    P     C     NG   EC++         ++Y+      P+ 
Sbjct: 815 CNCLLPYTGATCEVVLAPCAPSPC----RNG--GECRQ--------SEDYESFSCVCPTG 860

Query: 134 CEWCRCEPS-NEVHCVVADCAVPECVNPVYEPEQC-CPVCKNGPNCFAGTTIIPAGIEVK 191
            +   CE   NE  CV++ C         +   +C C    +G NC           E  
Sbjct: 861 WQGQTCEVDINE--CVLSPCRHGASCQNTHGGYRCHCQAGYSGRNC-----------ETD 907

Query: 192 VDECNICHCHNG 203
           +D+C    CHNG
Sbjct: 908 IDDCRPNPCHNG 919


>gi|109150416 peroxidasin [Homo sapiens]
          Length = 1479

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 99   KVEHNGCCPECKEVKNFCEYHGKNYKILEEFKPSPCEWCRCEPSNEVHCVVADCAVPECV 158
            K+E      EC +     E H  N K    +K   C  C C+   +V C V  C    C 
Sbjct: 1405 KLESRLSTTECVDAGG--ESHANNTK----WKKDACTICECK-DGQVTCFVEACPPATCA 1457

Query: 159  NPVYEPEQCCPVC 171
             PV  P  CCPVC
Sbjct: 1458 VPVNIPGACCPVC 1470


>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
          Length = 365

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 39/161 (24%), Positives = 54/161 (33%), Gaps = 13/161 (8%)

Query: 72  SNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKP 131
           ++ PC  A   PVC +P C  I   C +      C      +  CE             P
Sbjct: 147 TSSPCQQACCVPVCCKPVCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTP 206

Query: 132 SPCEWCRCEPS------NEVHCVVADCAVPECVNPV--YEPEQCCPVCKNGPNCFAGTTI 183
           S C+   C+P+       +  C V  C VP C  P    +   CC      P C    T 
Sbjct: 207 SCCQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVPTCSEDSSSCCQQSSCQPAC---CTS 263

Query: 184 IPAGIEVKVDECN--ICHCHNGDWWKPAQCSKRECQGKQTV 222
            P      V  C+     C      +PA C+   C+   +V
Sbjct: 264 SPCQHACCVPVCSGASTSCCQQSSCQPACCTASCCRPSSSV 304



 Score = 35.8 bits (81), Expect = 0.030
 Identities = 37/155 (23%), Positives = 45/155 (29%), Gaps = 23/155 (14%)

Query: 74  CPCVCALDGPVCDQPECPKIHPKCTKVE-HNGCC------PECKEVKNFCEYHGKNYKIL 126
           C  VC  D   C Q  C      CT       CC      P C  + + C         +
Sbjct: 125 CVSVCCGDSSCCQQSSCQS--ACCTSSPCQQACCVPVCCKPVCSGISSSCCQQSSCVSCV 182

Query: 127 EEFKPSPCEWCRCEPSNEVHCVVADCAVPECVNPVYEPEQC----CPVCKNGPNCFAGTT 182
                SPC    CEPS       + C    C     +P  C    C      P C     
Sbjct: 183 S----SPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSSPCQQACCVPVCCVPVC 238

Query: 183 IIPAGIEVKVDECNICHCHNGDWWKPAQCSKRECQ 217
            +P   E     C    C      +PA C+   CQ
Sbjct: 239 CVPTCSEDSSSCCQQSSC------QPACCTSSPCQ 267


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.141    0.501 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,200,032
Number of Sequences: 37866
Number of extensions: 615555
Number of successful extensions: 2833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 2002
Number of HSP's gapped (non-prelim): 694
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press