BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|32307132 NFS1 nitrogen fixation 1 [Homo sapiens] (457 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|32307132 NFS1 nitrogen fixation 1 [Homo sapiens] 909 0.0 gi|156713448 selenocysteine lyase [Homo sapiens] 213 3e-55 gi|157388923 molybdenum cofactor sulfurase [Homo sapiens] 57 3e-08 gi|239753371 PREDICTED: hypothetical protein [Homo sapiens] 38 0.017 gi|239747938 PREDICTED: hypothetical protein XP_002346476 [Homo ... 38 0.017 gi|239741833 PREDICTED: hypothetical protein XP_002342339 [Homo ... 38 0.017 gi|239757784 PREDICTED: hypothetical protein XP_002346335 [Homo ... 37 0.049 gi|239752293 PREDICTED: hypothetical protein [Homo sapiens] 37 0.049 gi|239746804 PREDICTED: hypothetical protein XP_002343853 [Homo ... 37 0.049 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 35 0.11 gi|171543895 ataxin 2 [Homo sapiens] 33 0.54 gi|4557289 alanine-glyoxylate aminotransferase [Homo sapiens] 33 0.70 gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 32 1.6 gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 32 1.6 gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 32 1.6 gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 32 1.6 gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 31 2.0 gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 31 2.0 gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 31 2.0 gi|24432032 zinc finger protein 503 [Homo sapiens] 31 2.0 gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s... 31 2.7 gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer... 31 2.7 gi|13128980 proline rich 14 [Homo sapiens] 31 2.7 gi|4507369 tyrosine aminotransferase [Homo sapiens] 30 3.5 gi|32441283 Ral GEF with PH domain and SH3 binding motif 2 [Homo... 30 3.5 gi|182507165 thymus expressed gene 3-like [Homo sapiens] 30 3.5 gi|110832843 TBP-associated factor 4 [Homo sapiens] 30 4.6 gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 30 4.6 gi|116089333 kelch domain containing 7A [Homo sapiens] 30 4.6 gi|14149793 glutamine rich 2 [Homo sapiens] 30 4.6 >gi|32307132 NFS1 nitrogen fixation 1 [Homo sapiens] Length = 457 Score = 909 bits (2348), Expect = 0.0 Identities = 457/457 (100%), Positives = 457/457 (100%) Query: 1 MLLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLY 60 MLLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLY Sbjct: 1 MLLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLY 60 Query: 61 MDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE 120 MDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE Sbjct: 61 MDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE 120 Query: 121 IIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQK 180 IIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQK Sbjct: 121 IIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQK 180 Query: 181 SGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKI 240 SGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKI Sbjct: 181 SGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKI 240 Query: 241 PLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPL 300 PLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPL Sbjct: 241 PLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPL 300 Query: 301 VVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAY 360 VVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAY Sbjct: 301 VVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAY 360 Query: 361 VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVD 420 VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVD Sbjct: 361 VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVD 420 Query: 421 YTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457 YTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH Sbjct: 421 YTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457 >gi|156713448 selenocysteine lyase [Homo sapiens] Length = 445 Score = 213 bits (542), Expect = 3e-55 Identities = 151/442 (34%), Positives = 227/442 (51%), Gaps = 43/442 (9%) Query: 37 APQSAVPADTAAAP----EVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNPHSRT 92 AP PA A+ P + R +YMD ATTPL+P V+ AM + +GNP S Sbjct: 6 APGRDAPAPAASQPSGCGKHNSPERKVYMDYNATTPLEPEVIQAMTKAMWEAWGNPSS-P 64 Query: 93 HAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFYRSR------- 145 ++ G +++ + AR+ +A +IG P++IIFTSG TESNN+ I V + + + Sbjct: 65 YSAGRKAKDIINAARESLAKMIGGKPQDIIFTSGGTESNNLVIHSVVKHFHANQTSKGHT 124 Query: 146 ----------KKHLITTQTEHKCV-LDSCRSLEAEGFQVTYLPVQK-SGIIDLKELEAAI 193 K H IT+ EH + L +E + VT++PV K SG ++ ++ AA+ Sbjct: 125 GGHHSPVKGAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQAEVDDILAAV 184 Query: 194 QPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRK----------VYFHTDAAQAVGKIPLD 243 +P T LV++M NNE G+ P+ EI + + + HTDAAQA+GK +D Sbjct: 185 RPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVD 244 Query: 244 VNDMKIDLMSISGHKIYGPKGVGAIYIRRRPR-VRVEALQSGGGQERGMRSGTVPTPLVV 302 V D+ +D ++I GHK YGP+ +GA+YIR + + GGGQER R GT TP++ Sbjct: 245 VEDLGVDFLTIVGHKFYGPR-IGALYIRGLGEFTPLYPMLFGGGQERNFRPGTENTPMIA 303 Query: 303 GLGAACEVAQQEME-YD-HKRISK--LSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSF 358 GLG A E+ Q E Y+ H R + L ERL + + P N S Sbjct: 304 GLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSI 363 Query: 359 --AYVEGESLLMALKDVALSSGSACTS-ASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTT 415 ++G +L + + S G+AC S +PS VL + G D+A +++R +GR TT Sbjct: 364 RGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTT 423 Query: 416 EEEVDYTVEKCIQHVKRLREMS 437 EVD V+ Q V +L + + Sbjct: 424 RAEVDLVVQDLKQAVAQLEDQA 445 >gi|157388923 molybdenum cofactor sulfurase [Homo sapiens] Length = 888 Score = 57.0 bits (136), Expect = 3e-08 Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 22/265 (8%) Query: 49 APEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLI-NYYGNPHSRTHAYGWESEAAMERAR 107 A E + +Y+D T L++ L+ N YGNPHS+ + + +E+ R Sbjct: 40 AREFSRLAGTVYLDHAGATLFSQSQLESFTSDLMENTYGNPHSQNISSKLTHDT-VEQVR 98 Query: 108 QQVASLIG--ADPREIIFTSGATESNNI---AIKGVARFYRSRKKHLITTQTEHKCVLDS 162 ++ + A+ +IFT+G+T + + A V++ S H V+ Sbjct: 99 YRILAHFHTTAEDYTVIFTAGSTAALKLVAEAFPWVSQGPESSGSRFCYLTDSHTSVVGM 158 Query: 163 CRSLEAEGFQVTYLPVQKSGIIDLKELEA-AIQPDTSLVSVMTV---NNEIGVKQPIAEI 218 A V PV+ + +E A A PD L + +N GV+ P++ I Sbjct: 159 RNVTMA--INVISTPVRPEDLWSAEERSASASNPDCQLPHLFCYPAQSNFSGVRYPLSWI 216 Query: 219 GRICSSR--------KVYFHTDAAQAVGKIPLDVNDMKIDLMSISGHKIYG-PKGVGAIY 269 + S R K + DAA V PLD++ + D + IS +KI+G P G+GA+ Sbjct: 217 EEVKSGRLHPVSTPGKWFVLLDAASYVSTSPLDLSAHQADFVPISFYKIFGFPTGLGALL 276 Query: 270 IRRRPRVRVEALQSGGGQERGMRSG 294 + R + GGG +G Sbjct: 277 VHNRAAPLLRKTYFGGGTASAYLAG 301 >gi|239753371 PREDICTED: hypothetical protein [Homo sapiens] Length = 119 Score = 38.1 bits (87), Expect = 0.017 Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 4 RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58 RAA AA AV AA P +P G RL G P+SA T A E GP L P Sbjct: 50 RAALVAAAAAVAAASAAPPGSPALGNRLHAGGPLPRSA-SRPTRAGQESGPFLPP 103 >gi|239747938 PREDICTED: hypothetical protein XP_002346476 [Homo sapiens] Length = 119 Score = 38.1 bits (87), Expect = 0.017 Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 4 RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58 RAA AA AV AA P +P G RL G P+SA T A E GP L P Sbjct: 50 RAALVAAAAAVAAASAAPPGSPALGNRLHAGGPLPRSA-SRPTRAGQESGPFLPP 103 >gi|239741833 PREDICTED: hypothetical protein XP_002342339 [Homo sapiens] Length = 119 Score = 38.1 bits (87), Expect = 0.017 Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 4 RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58 RAA AA AV AA P +P G RL G P+SA T A E GP L P Sbjct: 50 RAALVAAAAAVAAASAAPPGSPALGNRLHAGGPLPRSA-SRPTRAGQESGPFLPP 103 >gi|239757784 PREDICTED: hypothetical protein XP_002346335 [Homo sapiens] Length = 97 Score = 36.6 bits (83), Expect = 0.049 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%) Query: 4 RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPA--------DTAAAPEVGPV 55 R + R A+ A PGP PA P G RL RAP S P+ +AAP GP Sbjct: 24 RNSANRKTDAILATPGPPPAQPQGGGRL----RAPPSPAPSSGLLSQVWQPSAAPWYGPF 79 Query: 56 LRPLYMDVQATTP 68 PL Q P Sbjct: 80 SGPLLRKEQKRNP 92 >gi|239752293 PREDICTED: hypothetical protein [Homo sapiens] Length = 97 Score = 36.6 bits (83), Expect = 0.049 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%) Query: 4 RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPA--------DTAAAPEVGPV 55 R + R A+ A PGP PA P G RL RAP S P+ +AAP GP Sbjct: 24 RNSANRKTDAILATPGPPPAQPQGGGRL----RAPPSPAPSSGLLSQVWQPSAAPWYGPF 79 Query: 56 LRPLYMDVQATTP 68 PL Q P Sbjct: 80 SGPLLRKEQKRNP 92 >gi|239746804 PREDICTED: hypothetical protein XP_002343853 [Homo sapiens] Length = 97 Score = 36.6 bits (83), Expect = 0.049 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%) Query: 4 RAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPA--------DTAAAPEVGPV 55 R + R A+ A PGP PA P G RL RAP S P+ +AAP GP Sbjct: 24 RNSANRKTDAILATPGPPPAQPQGGGRL----RAPPSPAPSSGLLSQVWQPSAAPWYGPF 79 Query: 56 LRPLYMDVQATTP 68 PL Q P Sbjct: 80 SGPLLRKEQKRNP 92 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 35.4 bits (80), Expect = 0.11 Identities = 24/64 (37%), Positives = 25/64 (39%) Query: 8 RRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATT 67 R AA A TA P P PA P + AP A A A AP GP P Sbjct: 150 RAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREP 209 Query: 68 PLDP 71 PL P Sbjct: 210 PLPP 213 >gi|171543895 ataxin 2 [Homo sapiens] Length = 1313 Score = 33.1 bits (74), Expect = 0.54 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 16 AAPGPKPAAPTRGLRLRVGDRAPQSAV----PADTAAAPEVGPVLRPLYMDVQ 64 A+PG PAAPTR L P+S V PA P PV PL M ++ Sbjct: 112 ASPGAPPAAPTRASPLGARASPPRSGVSLARPAPGCPRPACEPVYGPLTMSLK 164 >gi|4557289 alanine-glyoxylate aminotransferase [Homo sapiens] Length = 392 Score = 32.7 bits (73), Expect = 0.70 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Query: 167 EAEGFQVTYLPVQKSGIIDLKELEAAIQPDTSLVSVMTVN-NEIGVKQPIAEIGRICSSR 225 E G +V + G L+E+E + ++ +T + GV QP+ G +C Sbjct: 117 ERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRY 176 Query: 226 KVYFHTDAAQAVGKIPLDVNDMKIDLMSISGHK-IYGPKGVGAI 268 K D+ ++G PL ++ ID++ K + P G I Sbjct: 177 KCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLI 220 >gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] Length = 516 Score = 31.6 bits (70), Expect = 1.6 Identities = 36/110 (32%), Positives = 40/110 (36%), Gaps = 27/110 (24%) Query: 11 AVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPE----VGPVLRPLYMDVQAT 66 AV T +PGP+PAA T G AAAPE P L P A Sbjct: 252 AVETTPSPGPQPAALTTG-----------------EAAAPESPHQAEPYLSPSPSACTAV 294 Query: 67 TPLDPRVLDAMLPY-----LINYYGNPHSRTHAYGWESEAAMERARQQVA 111 P LD + Y L G+P S T YG A QQVA Sbjct: 295 QEPSPGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDPQQVA 343 >gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] Length = 503 Score = 31.6 bits (70), Expect = 1.6 Identities = 36/110 (32%), Positives = 40/110 (36%), Gaps = 27/110 (24%) Query: 11 AVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPE----VGPVLRPLYMDVQAT 66 AV T +PGP+PAA T G AAAPE P L P A Sbjct: 239 AVETTPSPGPQPAALTTG-----------------EAAAPESPHQAEPYLSPSPSACTAV 281 Query: 67 TPLDPRVLDAMLPY-----LINYYGNPHSRTHAYGWESEAAMERARQQVA 111 P LD + Y L G+P S T YG A QQVA Sbjct: 282 QEPSPGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDPQQVA 330 >gi|116256464 hypothetical protein LOC343990 [Homo sapiens] Length = 962 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 9 RAAVAVTAAPGPKPAAPTRGLRLR--VGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQAT 66 R + AP P P AP L+ R P ++ P A +P V P P +D +A Sbjct: 478 RIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEP--GPGSLDAEAA 535 Query: 67 TPLDPRVLDAMLP 79 P P+ A P Sbjct: 536 APERPKAERAEAP 548 >gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] Length = 2817 Score = 31.6 bits (70), Expect = 1.6 Identities = 20/62 (32%), Positives = 25/62 (40%) Query: 10 AAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPL 69 +A+A T+AP P PAA + + P SA A AP P V A P Sbjct: 1866 SALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVSAPNPA 1925 Query: 70 DP 71 P Sbjct: 1926 PP 1927 >gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] Length = 336 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 13/65 (20%) Query: 16 AAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLD 75 A P P PAAPTR RL G R+ AD +P GPV P PR + Sbjct: 70 AGPSPSPAAPTRP-RLLHGRRSAGHVARAD--VSPPAGPV----------PAPTPPRARN 116 Query: 76 AMLPY 80 A P+ Sbjct: 117 AETPW 121 >gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo sapiens] Length = 336 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 13/65 (20%) Query: 16 AAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLD 75 A P P PAAPTR RL G R+ AD +P GPV P PR + Sbjct: 70 AGPSPSPAAPTRP-RLLHGRRSAGHVARAD--VSPPAGPV----------PAPTPPRARN 116 Query: 76 AMLPY 80 A P+ Sbjct: 117 AETPW 121 >gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo sapiens] Length = 321 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 13/65 (20%) Query: 16 AAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLD 75 A P P PAAPTR RL G R+ AD +P GPV P PR + Sbjct: 70 AGPSPSPAAPTRP-RLLHGRRSAGHVARAD--VSPPAGPV----------PAPTPPRARN 116 Query: 76 AMLPY 80 A P+ Sbjct: 117 AETPW 121 >gi|24432032 zinc finger protein 503 [Homo sapiens] Length = 646 Score = 31.2 bits (69), Expect = 2.0 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 13/81 (16%) Query: 6 AWRRAAVAVTAAPGP--KPAAPTRGL--------RLRVGDRAPQSAVPADTAAAPEVGPV 55 AW A ++ PGP PA T+ LR +R P + TA G + Sbjct: 31 AWTSALSGNSSGPGPGSSPAGSTKPFVHAVPPSDPLRQANRLPIKVLKMLTA---RTGHI 87 Query: 56 LRPLYMDVQATTPLDPRVLDA 76 L P Y+ +TP+ P LDA Sbjct: 88 LHPEYLQPLPSTPVSPIELDA 108 >gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo sapiens] Length = 3014 Score = 30.8 bits (68), Expect = 2.7 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 325 LSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSA 384 L + N S P V+ P H +L++ +V+G L + L D A +G S Sbjct: 1107 LFNNYVTNKSNSFPTGVIGCIPAHDPDVSDSLNYTFVQGNELRLLLLDPA--TGELQLSR 1164 Query: 385 SLEPSYVLRAI--GTDEDLAHSSIRFGIGRFT--TEEEVDYTVEKCIQHVKRLREMSPLW 440 L+ + L A+ + D HS F R T T++ + ++ ++++ + + +SPL Sbjct: 1165 DLDNNRPLEALMEVSVSDGIHSVTAFCTLRVTIITDDMLTNSITVRLENMSQEKFLSPLL 1224 Query: 441 EMVQDGI 447 + +G+ Sbjct: 1225 ALFVEGV 1231 >gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 [Homo sapiens] Length = 530 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 18 PGPKPAAPTRG---LRLRVGDRAPQSAVPADTAAAPEVGPVLRP 58 PGP PA P R L LR R P +AV A AAA + V P Sbjct: 106 PGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAGMAGVAAP 149 >gi|13128980 proline rich 14 [Homo sapiens] Length = 585 Score = 30.8 bits (68), Expect = 2.7 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%) Query: 9 RAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTP 68 R AV + P+ P+RG+R G VP + A +P+VGP+L+ ++ A Sbjct: 518 RRAVEFRDSSLPRSRRPSRGVRAAGG-----RTVPPNVAPSPDVGPLLQQRLEELDALL- 571 Query: 69 LDPRVLDAMLPY 80 L+ +D P+ Sbjct: 572 LEEETVDREQPH 583 >gi|4507369 tyrosine aminotransferase [Homo sapiens] Length = 454 Score = 30.4 bits (67), Expect = 3.5 Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 18/148 (12%) Query: 68 PLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGA-----DPREII 122 P DP V AM L + N G+ +R+++AS + +++I Sbjct: 88 PTDPEVTQAMKDALDSGKYN--------GYAPSIGFLSSREEIASYYHCPEAPLEAKDVI 139 Query: 123 FTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQKSG 182 TSG +++ ++ + +A + ++++ + S+ E LP +KS Sbjct: 140 LTSGCSQAIDLCLAVLA----NPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLP-EKSW 194 Query: 183 IIDLKELEAAIQPDTSLVSVMTVNNEIG 210 IDLK+LE I T+ + V +N G Sbjct: 195 EIDLKQLEYLIDEKTACLIVNNPSNPCG 222 >gi|32441283 Ral GEF with PH domain and SH3 binding motif 2 [Homo sapiens] Length = 583 Score = 30.4 bits (67), Expect = 3.5 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 29 LRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNP 88 L++ G P+SA + PEVG + V A L P+ P N + Sbjct: 282 LKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQT----PPSPRNLIPHG 337 Query: 89 HSRTHAYGWESEAAMERARQQVASLIGADPREII 122 H + H+ G+ M A + A+ A PR ++ Sbjct: 338 HRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLL 371 >gi|182507165 thymus expressed gene 3-like [Homo sapiens] Length = 629 Score = 30.4 bits (67), Expect = 3.5 Identities = 35/119 (29%), Positives = 41/119 (34%), Gaps = 23/119 (19%) Query: 2 LLRAAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYM 61 LLR RR A +PG P R +R + P A P+ +A P P L + Sbjct: 256 LLRRRRRRGAGQPRTSPGGADGGPRRQNSVR---QRPPDASPSPGSARPAREPSLERV-- 310 Query: 62 DVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPRE 120 P P L SR A WESEAA E A A P E Sbjct: 311 ---GGHPTSPAAL---------------SRAWASSWESEAAPEPAAPPAAPSPPDSPAE 351 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 30.0 bits (66), Expect = 4.6 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 10/77 (12%) Query: 5 AAWRRAAVAVTAAPGPKPAAPTRGLRL----RVGDRAPQSAV------PADTAAAPEVGP 54 AA A V+ PG AAP G++ RV AP +A PA TAA+ +GP Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGP 377 Query: 55 VLRPLYMDVQATTPLDP 71 ++ A P P Sbjct: 378 TMQGALPSPAAVPPPAP 394 >gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] Length = 525 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%) Query: 5 AAWRRAAVAVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQ 64 AA AA A AAPGP P AP D A A+ AA P + R + Q Sbjct: 42 AAAAAAAAAAAAAPGPTPPAPPG----PGTDAQAAGAERAEEAAGPGAAALQREAAYNWQ 97 Query: 65 ATTP 68 A+ P Sbjct: 98 ASKP 101 >gi|116089333 kelch domain containing 7A [Homo sapiens] Length = 777 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 13 AVTAAPGPKPAAPTRGLRLRVGDRAPQSAVPADTAAAPEVGP 54 A+T P P+P + G G +A + A+ AA+P+ GP Sbjct: 312 ALTEVPSPRPPPGSLGTGAASGGQAGDTKGAAERAASPQTGP 353 >gi|14149793 glutamine rich 2 [Homo sapiens] Length = 1663 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/121 (19%), Positives = 45/121 (37%) Query: 29 LRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNP 88 LR+ + S+ + AP L P +D +AT P + + L+ Y Sbjct: 1175 LRMIIESMLTSSSTLLSMSMAPHKAHTLAPGQIDPEATCPACSLDVSHQVSTLVRRYEQL 1234 Query: 89 HSRTHAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFYRSRKKH 148 ++ + + ++Q L+G I+ G E NI + +R ++K Sbjct: 1235 QDMVNSLAVSRPSKKAKLQRQDEELLGRVQSAILQVQGDCEKLNITTSNLIEDHRQKQKD 1294 Query: 149 L 149 + Sbjct: 1295 I 1295 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.133 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,223,620 Number of Sequences: 37866 Number of extensions: 771315 Number of successful extensions: 2684 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 2632 Number of HSP's gapped (non-prelim): 80 length of query: 457 length of database: 18,247,518 effective HSP length: 106 effective length of query: 351 effective length of database: 14,233,722 effective search space: 4996036422 effective search space used: 4996036422 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.