Guide to the Human Genome
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Search of human proteins with 31563514

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31563514 N-acetyltransferase 5 isoform c [Homo sapiens]
         (111 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31563514 N-acetyltransferase 5 isoform c [Homo sapiens]            231   7e-62
gi|7705823 N-acetyltransferase 5 isoform a [Homo sapiens]             212   5e-56
gi|31563512 N-acetyltransferase 5 isoform b [Homo sapiens]            175   8e-45
gi|14249280 alpha-N-acetyltransferase 1B [Homo sapiens]                67   3e-12
gi|10835057 alpha-N-acetyltransferase 1A [Homo sapiens]                64   2e-11
gi|190341107 N-acetyltransferase 12 [Homo sapiens]                     32   0.14 
gi|166295179 ELG protein isoform a [Homo sapiens]                      27   4.6  
gi|134254455 N-acetyltransferase 15 [Homo sapiens]                     26   6.0  
gi|134254440 N-acetyltransferase 15 [Homo sapiens]                     26   6.0  
gi|13376261 N-acetyltransferase 15 [Homo sapiens]                      26   6.0  

>gi|31563514 N-acetyltransferase 5 isoform c [Homo sapiens]
          Length = 111

 Score =  231 bits (590), Expect = 7e-62
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK 60
           MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK
Sbjct: 1   MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK 60

Query: 61  AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERYEESTFQGY 111
           AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERYEESTFQGY
Sbjct: 61  AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERYEESTFQGY 111


>gi|7705823 N-acetyltransferase 5 isoform a [Homo sapiens]
          Length = 178

 Score =  212 bits (540), Expect = 5e-56
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK 60
           MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK
Sbjct: 1   MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK 60

Query: 61  AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISER 102
           AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISER
Sbjct: 61  AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISER 102


>gi|31563512 N-acetyltransferase 5 isoform b [Homo sapiens]
          Length = 166

 Score =  175 bits (443), Expect = 8e-45
 Identities = 84/84 (100%), Positives = 84/84 (100%)

Query: 19  NLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREEWHGHVTALS 78
           NLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREEWHGHVTALS
Sbjct: 7   NLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREEWHGHVTALS 66

Query: 79  VAPEFRRLGLAAKLMELLEEISER 102
           VAPEFRRLGLAAKLMELLEEISER
Sbjct: 67  VAPEFRRLGLAAKLMELLEEISER 90


>gi|14249280 alpha-N-acetyltransferase 1B [Homo sapiens]
          Length = 229

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 10  DDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREE 69
           DDL    + NL  L E Y + +YL +   WP+   +AE   G+++GY++ K E     + 
Sbjct: 9   DDLMNMQHCNLLCLPENYQMKYYLYHGLSWPQLSYIAEDEDGKIVGYVLAKME-EEPDDV 67

Query: 70  WHGHVTALSVAPEFRRLGLAAKLME-----LLEEISERY 103
            HGH+T+L+V    RRLGLA KLM+     ++E  + +Y
Sbjct: 68  PHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKY 106


>gi|10835057 alpha-N-acetyltransferase 1A [Homo sapiens]
          Length = 235

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 10  DDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREE 69
           +DL    + NL  L E Y + +Y  +   WP+   +AE   G+++GY++ K E     + 
Sbjct: 9   EDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEED-PDDV 67

Query: 70  WHGHVTALSVAPEFRRLGLAAKLME-----LLEEISERY 103
            HGH+T+L+V    RRLGLA KLM+     ++E  + +Y
Sbjct: 68  PHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKY 106


>gi|190341107 N-acetyltransferase 12 [Homo sapiens]
          Length = 362

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 23  LTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREEWHGHVTALSVAPE 82
           L+E Y I  Y  ++ +WP+   +A   G E +G I+ K +    +    G++  L+V  +
Sbjct: 235 LSEPYSIYTYRYFIHNWPQLCFLAMV-GEECVGAIVCKLD-MHKKMFRRGYIAMLAVDSK 292

Query: 83  FRRLGLAAKLME 94
           +RR G+   L++
Sbjct: 293 YRRNGIGTNLVK 304


>gi|166295179 ELG protein isoform a [Homo sapiens]
          Length = 620

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 44  IVAEAPGGELMGYIMGKAEGSVAREEWHGHVTALSVAP-EFRRLGLAAKLMELLEEISER 102
           + AEAP G  +G    +AE  V R    G    + V   E   + +   L EL+ + S R
Sbjct: 11  VKAEAPAGPALGLPSPEAESGVDR----GEPEPMEVEEGELEIVPVRRSLKELIPDTSRR 66

Query: 103 YE 104
           YE
Sbjct: 67  YE 68


>gi|134254455 N-acetyltransferase 15 [Homo sapiens]
          Length = 242

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 21/101 (20%)

Query: 19  NLDPLTETYGIPFYLQYLAHW-------PEYFIVAEAPGGELMGYIMG---------KAE 62
           ++D +    G  F ++Y   W        ++F +A    G ++G I+          K +
Sbjct: 22  DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGAIVGMIVAEIKNRTKIHKED 81

Query: 63  GSVAREEWH-----GHVTALSVAPEFRRLGLAAKLMELLEE 98
           G +    +       ++ +L V  EFR+ G+ + L+E L++
Sbjct: 82  GDILASNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKD 122


>gi|134254440 N-acetyltransferase 15 [Homo sapiens]
          Length = 242

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 21/101 (20%)

Query: 19  NLDPLTETYGIPFYLQYLAHW-------PEYFIVAEAPGGELMGYIMG---------KAE 62
           ++D +    G  F ++Y   W        ++F +A    G ++G I+          K +
Sbjct: 22  DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGAIVGMIVAEIKNRTKIHKED 81

Query: 63  GSVAREEWH-----GHVTALSVAPEFRRLGLAAKLMELLEE 98
           G +    +       ++ +L V  EFR+ G+ + L+E L++
Sbjct: 82  GDILASNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKD 122


>gi|13376261 N-acetyltransferase 15 [Homo sapiens]
          Length = 242

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 21/101 (20%)

Query: 19  NLDPLTETYGIPFYLQYLAHW-------PEYFIVAEAPGGELMGYIMG---------KAE 62
           ++D +    G  F ++Y   W        ++F +A    G ++G I+          K +
Sbjct: 22  DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGAIVGMIVAEIKNRTKIHKED 81

Query: 63  GSVAREEWH-----GHVTALSVAPEFRRLGLAAKLMELLEE 98
           G +    +       ++ +L V  EFR+ G+ + L+E L++
Sbjct: 82  GDILASNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKD 122


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,060,900
Number of Sequences: 37866
Number of extensions: 159507
Number of successful extensions: 346
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 338
Number of HSP's gapped (non-prelim): 10
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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