Search of human proteins with 31542280

Search of human proteins with 31542280

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31542280 hypothetical protein LOC221481 [Homo sapiens]
         (367 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31542280 hypothetical protein LOC221481 [Homo sapiens]             732   0.0  
gi|31377663 SVH protein isoform a [Homo sapiens]                       69   5e-12
gi|238776793 SVH protein isoform b [Homo sapiens]                      67   3e-11
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]      59   9e-09
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]     57   3e-08
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]     57   3e-08
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]      57   3e-08
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s...    49   9e-06
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s...    49   9e-06
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s...    49   9e-06
gi|238776797 SVH protein isoform e [Homo sapiens]                      46   5e-05
gi|6912478 karyopherin alpha 6 [Homo sapiens]                          33   0.31 
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         32   0.69 
gi|239753837 PREDICTED: similar to Uncharacterized protein LP905...    32   0.90 
gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo ...    32   0.90 
gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo ...    32   0.90 
gi|7662230 ring finger protein 40 [Homo sapiens]                       30   2.6  
gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]              30   2.6  
gi|31657094 anillin, actin binding protein [Homo sapiens]              30   2.6  
gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]         30   3.4  
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      30   3.4  
gi|222144293 karyopherin alpha 1 [Homo sapiens]                        30   4.5  
gi|157412259 notch1-induced protein isoform a [Homo sapiens]           30   4.5  
gi|157671913 notch1-induced protein isoform b [Homo sapiens]           30   4.5  
gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog, yea...    30   4.5  
gi|239754614 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|8922785 hypothetical protein LOC55267 [Homo sapiens]                30   4.5  
gi|38788219 zinc finger protein 428 [Homo sapiens]                     29   7.6  
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]            29   7.6  
gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Hom...    29   7.6  

>gi|31542280 hypothetical protein LOC221481 [Homo sapiens]
          Length = 367

 Score =  732 bits (1890), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPLCSNSPICIARECPGP 60
           MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPLCSNSPICIARECPGP
Sbjct: 1   MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPLCSNSPICIARECPGP 60

Query: 61  GERALPQEAPAPEASAVGGPKGLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSI 120
           GERALPQEAPAPEASAVGGPKGLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSI
Sbjct: 61  GERALPQEAPAPEASAVGGPKGLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSI 120

Query: 121 TRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIK 180
           TRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIK
Sbjct: 121 TRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIK 180

Query: 181 VLELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLL 240
           VLELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLL
Sbjct: 181 VLELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLL 240

Query: 241 SYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWH 300
           SYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWH
Sbjct: 241 SYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWH 300

Query: 301 YNEQSLHESLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQYPQDLRARPSSCQPSR 360
           YNEQSLHESLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQYPQDLRARPSSCQPSR
Sbjct: 301 YNEQSLHESLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQYPQDLRARPSSCQPSR 360

Query: 361 SYFKNTE 367
           SYFKNTE
Sbjct: 361 SYFKNTE 367


>gi|31377663 SVH protein isoform a [Homo sapiens]
          Length = 343

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 11/329 (3%)

Query: 21  LATGAGAIYLLYKAIKAGIKCKPPLCSNSPICIARECPGPGERALPQEAPAPEA------ 74
           L  GAGA Y +Y+  +   +    L   S         G  E  L   +  P+       
Sbjct: 14  LLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWES 73

Query: 75  --SAVGGPKGLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEAS 132
             S    P+ L         ++ +L++LL  LE  +D       L ++         +A 
Sbjct: 74  QWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAI 133

Query: 133 ACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIKVLE-LISTIWDT 191
                 I ++   ++  + S+K +ALN L   S   + ++KI+ +  +V E + S   ++
Sbjct: 134 IRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 193

Query: 192 ELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLY 251
            + +AGL LL N+ + +     L   +  L ++L +     +VQ ++LL  L++   +  
Sbjct: 194 AVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTE 253

Query: 252 DILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLF 311
            +L  QV S+FL+L+    +  +L  VL   + +        +  V+  + E SL   L 
Sbjct: 254 GLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLH 313

Query: 312 GEESRLADRLLALVIHPEEDVQIQACKVI 340
           GEE   A ++ ALV H + +V+ +   +I
Sbjct: 314 GEE--CAQKIRALVDHHDAEVKEKVVTII 340


>gi|238776793 SVH protein isoform b [Homo sapiens]
          Length = 308

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 96  ELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKT 155
           +L++LL  LE  +D       L ++         +A       I ++   ++  + S+K 
Sbjct: 62  QLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKE 121

Query: 156 QALNTLKAFSGIRKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQL 214
           +ALN L   S   + ++KI+ +  +V E + S   ++ + +AGL LL N+ + +     L
Sbjct: 122 KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHML 181

Query: 215 RRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSL 274
              +  L ++L +     +VQ ++LL  L++   +   +L  QV S+FL+L+    +  +
Sbjct: 182 HSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEI 241

Query: 275 LYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQI 334
           L  VL   + +        +  V+  + E SL   L GEE   A ++ ALV H + +V+ 
Sbjct: 242 LLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEE--CAQKIRALVDHHDAEVKE 299

Query: 335 QACKVI 340
           +   +I
Sbjct: 300 KVVTII 305


>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
          Length = 453

 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 48/250 (19%), Positives = 113/250 (45%), Gaps = 4/250 (1%)

Query: 96  ELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKT 155
           +L+++LN LE   D + + + L ++         + +      + ++  ++  KD  ++ 
Sbjct: 206 DLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIRE 265

Query: 156 QALNTLKAFSGIRKFRLKIQEHSIKVLE--LISTIWDTELHIAGLRLLNNLPLPDYVHPQ 213
           +  N L   S   + + KI+ +  +V +  ++  + D+ + +AGLRLL N+ + ++    
Sbjct: 266 KTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL-DSAVQMAGLRLLTNMTVTNHYQHL 324

Query: 214 LRRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGS 273
           L    P    +L       ++Q ++L+    +   +  ++++C+V S  ++LF       
Sbjct: 325 LSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDRE 384

Query: 274 LLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQ 333
           +L  +L   E +++          +  ++  SL   LF E      ++ AL  H +  V+
Sbjct: 385 ILLNILTLFENINDNIKNEGLASSRKEFSRSSLF-FLFKESGVCVKKIKALANHNDLVVK 443

Query: 334 IQACKVIVSL 343
           ++  KV+  L
Sbjct: 444 VKVLKVLTKL 453


>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 53/366 (14%)

Query: 21  LATGAGAIYLLYKAIKAGIKCKPPLCS--NSPICIARECPGPG-------------ERAL 65
           L  GAGA Y +Y+  +   + K  +    +  +  A +C G                +++
Sbjct: 14  LVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSI 73

Query: 66  PQEAPAPEASAVGGPKGLAVERER--HGRDSGELRRLLNSLEC--KQDEYAKSMILHSIT 121
               P        G +  A  R R    R + + R   NS +      E  K + L  ++
Sbjct: 74  VWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMS 133

Query: 122 RCVYLLEA-------EASACTTDDIV-------LLGYMLDDKDNSVKTQALNTLKAFSGI 167
              Y+LEA        A+     DI+       ++  +L+ +D  VK +AL  L   S  
Sbjct: 134 EKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVN 193

Query: 168 RKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQ 226
            + + +++ +  +V +  I++  ++ + +AGLRLL N+ + +     L   +     +  
Sbjct: 194 AENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFS 253

Query: 227 SDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLS 286
           +     ++Q ++LL  LA+   +  ++L  QV S+  +LF   ++  ++ ++LV  E ++
Sbjct: 254 AGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENIN 313

Query: 287 EGRNAPHYHVVKWHYNEQSLHESLFGEESRL---------ADRLLALVIHPEEDVQIQAC 337
           +          KW  NE +  ++ FGE S           AD++L +  H +  V+++  
Sbjct: 314 DN--------FKWEENEPT--QNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVG 363

Query: 338 KVIVSL 343
           K +  L
Sbjct: 364 KFMAKL 369


>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 53/366 (14%)

Query: 21  LATGAGAIYLLYKAIKAGIKCKPPLCS--NSPICIARECPGPG-------------ERAL 65
           L  GAGA Y +Y+  +   + K  +    +  +  A +C G                +++
Sbjct: 14  LVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSI 73

Query: 66  PQEAPAPEASAVGGPKGLAVERER--HGRDSGELRRLLNSLEC--KQDEYAKSMILHSIT 121
               P        G +  A  R R    R + + R   NS +      E  K + L  ++
Sbjct: 74  VWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMS 133

Query: 122 RCVYLLEA-------EASACTTDDIV-------LLGYMLDDKDNSVKTQALNTLKAFSGI 167
              Y+LEA        A+     DI+       ++  +L+ +D  VK +AL  L   S  
Sbjct: 134 EKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVN 193

Query: 168 RKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQ 226
            + + +++ +  +V +  I++  ++ + +AGLRLL N+ + +     L   +     +  
Sbjct: 194 AENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFS 253

Query: 227 SDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLS 286
           +     ++Q ++LL  LA+   +  ++L  QV S+  +LF   ++  ++ ++LV  E ++
Sbjct: 254 AGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENIN 313

Query: 287 EGRNAPHYHVVKWHYNEQSLHESLFGEESRL---------ADRLLALVIHPEEDVQIQAC 337
           +          KW  NE +  ++ FGE S           AD++L +  H +  V+++  
Sbjct: 314 DN--------FKWEENEPT--QNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVG 363

Query: 338 KVIVSL 343
           K +  L
Sbjct: 364 KFMAKL 369


>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 53/366 (14%)

Query: 21  LATGAGAIYLLYKAIKAGIKCKPPLCS--NSPICIARECPGPG-------------ERAL 65
           L  GAGA Y +Y+  +   + K  +    +  +  A +C G                +++
Sbjct: 14  LVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSI 73

Query: 66  PQEAPAPEASAVGGPKGLAVERER--HGRDSGELRRLLNSLEC--KQDEYAKSMILHSIT 121
               P        G +  A  R R    R + + R   NS +      E  K + L  ++
Sbjct: 74  VWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMS 133

Query: 122 RCVYLLEA-------EASACTTDDIV-------LLGYMLDDKDNSVKTQALNTLKAFSGI 167
              Y+LEA        A+     DI+       ++  +L+ +D  VK +AL  L   S  
Sbjct: 134 EKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVN 193

Query: 168 RKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQ 226
            + + +++ +  +V +  I++  ++ + +AGLRLL N+ + +     L   +     +  
Sbjct: 194 AENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFS 253

Query: 227 SDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLS 286
           +     ++Q ++LL  LA+   +  ++L  QV S+  +LF   ++  ++ ++LV  E ++
Sbjct: 254 AGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENIN 313

Query: 287 EGRNAPHYHVVKWHYNEQSLHESLFGEESRL---------ADRLLALVIHPEEDVQIQAC 337
           +          KW  NE +  ++ FGE S           AD++L +  H +  V+++  
Sbjct: 314 DN--------FKWEENEPT--QNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVG 363

Query: 338 KVIVSL 343
           K +  L
Sbjct: 364 KFMAKL 369


>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 284

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 27/246 (10%)

Query: 96  ELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKT 155
           +L++LL  LE  +D       L ++         +A       I ++   ++  + S+K 
Sbjct: 62  QLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKE 121

Query: 156 QALNTLKAFSGIRKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQL 214
           +ALN L   S   + ++KI+ +  +V E + S   ++ + +AGLRLL N+ + +     L
Sbjct: 122 KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHML 181

Query: 215 RRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSL 274
              +  L ++                        LL    N +V S+FL+L+    +  +
Sbjct: 182 HSYITDLFQV------------------------LLTGNGNTKVDSSFLSLYDSHVAKEI 217

Query: 275 LYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQI 334
           L  VL   + +        +  V+  + E SL   L GEE   A ++ ALV H + +V+ 
Sbjct: 218 LLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEE--CAQKIRALVDHHDAEVKE 275

Query: 335 QACKVI 340
           +   +I
Sbjct: 276 KVVTII 281


>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 284

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 27/246 (10%)

Query: 96  ELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKT 155
           +L++LL  LE  +D       L ++         +A       I ++   ++  + S+K 
Sbjct: 62  QLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKD 121

Query: 156 QALNTLKAFSGIRKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQL 214
           +ALN L   S   + ++KI+ +  +V E + S   ++ + +AGLRLL N+ + +     L
Sbjct: 122 KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHML 181

Query: 215 RRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSL 274
              +  L ++                        LL    N +V S+FL+L+    +  +
Sbjct: 182 HSYITDLFQV------------------------LLTGNGNTKVDSSFLSLYDSHVAKEI 217

Query: 275 LYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQI 334
           L  VL   + +        +  V+  + E SL   L GEE   A ++ ALV H + +V+ 
Sbjct: 218 LLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEE--CAQKIRALVDHHDAEVKE 275

Query: 335 QACKVI 340
           +   +I
Sbjct: 276 KVVTII 281


>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
           sapiens]
          Length = 284

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 27/246 (10%)

Query: 96  ELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKT 155
           +L++LL  LE  +D       L ++         +A       I ++   ++  + S+K 
Sbjct: 62  QLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKD 121

Query: 156 QALNTLKAFSGIRKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQL 214
           +ALN L   S   + ++KI+ +  +V E + S   ++ + +AGLRLL N+ + +     L
Sbjct: 122 KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHML 181

Query: 215 RRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSL 274
              +  L ++                        LL    N +V S+FL+L+    +  +
Sbjct: 182 HSYITDLFQV------------------------LLTGNGNTKVDSSFLSLYDSHVAKEI 217

Query: 275 LYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQI 334
           L  VL   + +        +  V+  + E SL   L GEE   A ++ ALV H + +V+ 
Sbjct: 218 LLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEE--CAQKIRALVDHHDAEVKE 275

Query: 335 QACKVI 340
           +   +I
Sbjct: 276 KVVTII 281


>gi|238776797 SVH protein isoform e [Homo sapiens]
          Length = 284

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 27/246 (10%)

Query: 96  ELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKT 155
           +L++LL  LE  +D       L ++         +A       I ++   ++  + S+K 
Sbjct: 62  QLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKE 121

Query: 156 QALNTLKAFSGIRKFRLKIQEHSIKVLE-LISTIWDTELHIAGLRLLNNLPLPDYVHPQL 214
           +ALN L   S   + ++KI+ +  +V E + S   ++ + +AGL LL N+ + +     L
Sbjct: 122 KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHML 181

Query: 215 RRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSL 274
              +  L ++                        LL    N +V S+FL+L+    +  +
Sbjct: 182 HSYITDLFQV------------------------LLTGNGNTKVDSSFLSLYDSHVAKEI 217

Query: 275 LYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQI 334
           L  VL   + +        +  V+  + E SL   L GEE   A ++ ALV H + +V+ 
Sbjct: 218 LLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEE--CAQKIRALVDHHDAEVKE 275

Query: 335 QACKVI 340
           +   +I
Sbjct: 276 KVVTII 281


>gi|6912478 karyopherin alpha 6 [Homo sapiens]
          Length = 536

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 218 MPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYD-ILNCQVHSNFLNLFQPTQSGSLLY 276
           +P  +E+L SD+   Q QAV  L  +A  + +  D +LNC + +  L L   +   ++  
Sbjct: 169 VPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTR 228

Query: 277 EVLVFAERLSEGRNAP 292
             +     L  G+N P
Sbjct: 229 NAVWALSNLCRGKNPP 244


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 58   PGPGERALPQEAPAPEASAV-------GGPKGLAVERERHGRDSGELRRLLNSLECKQD 109
            P P   ALP EA AP AS++          KG  V++E  G+  G + +L+ S+  ++D
Sbjct: 2063 PPPRAPALPSEARAPHASSLTAAKRSKAKAKGKEVKKENRGK-GGAVSKLMESMAAEED 2120


>gi|239753837 PREDICTED: similar to Uncharacterized protein LP9056
           [Homo sapiens]
          Length = 563

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 220 ALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQP----------- 268
           AL+++  + ++   VQ   LL+ + +   +L +  NC +  +  N  QP           
Sbjct: 8   ALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVFVPASAST 67

Query: 269 --TQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVI 326
             T SG  +YE + + +   +  +   Y  V WH+      + L   + RL +   +L +
Sbjct: 68  WWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLCV 127


>gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo
           sapiens]
          Length = 563

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 220 ALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQP----------- 268
           AL+++  + ++   VQ   LL+ + +   +L +  NC +  +  N  QP           
Sbjct: 8   ALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVFVPASAST 67

Query: 269 --TQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVI 326
             T SG  +YE + + +   +  +   Y  V WH+      + L   + RL +   +L +
Sbjct: 68  WWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLCV 127


>gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo
           sapiens]
          Length = 563

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 220 ALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQP----------- 268
           AL+++  + ++   VQ   LL+ + +   +L +  NC +  +  N  QP           
Sbjct: 8   ALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVFVPASAST 67

Query: 269 --TQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVI 326
             T SG  +YE + + +   +  +   Y  V WH+      + L   + RL +   +L +
Sbjct: 68  WWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLCV 127


>gi|7662230 ring finger protein 40 [Homo sapiens]
          Length = 1001

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 70/320 (21%), Positives = 117/320 (36%), Gaps = 51/320 (15%)

Query: 62  ERALPQEAPAPEASAVGGPKGLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSIT 121
           ER  P   P P ASA+        + E   R   EL + L +   K  E  K M L    
Sbjct: 616 EREGPSLGPPPVASALSRADREKAKVEETKRKESELLKGLRAELKKAQESQKEMKL---- 671

Query: 122 RCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIKV 181
               LL+   SA               K+   K Q +      +  RK + ++ E   ++
Sbjct: 672 ----LLDMYKSA--------------PKEQRDKVQLM------AAERKAKAEVDELRSRI 707

Query: 182 LELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPAL----------MEILQSDYIL 231
            EL          IA    L  +   +     L+R + A           M++    +  
Sbjct: 708 RELEERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFED 767

Query: 232 AQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNA 291
            Q Q  RLL  L +K+D  + +++ ++ +N ++     +   L  +VL    ++    +A
Sbjct: 768 MQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQV----DA 823

Query: 292 PHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPE---------EDVQIQACKVIVS 342
               V K    E++L  SL G E  L  R  AL ++           ED+++Q   V   
Sbjct: 824 QLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTR 883

Query: 343 LQYPQDLRARPSSCQPSRSY 362
           L+  Q   A   + +   S+
Sbjct: 884 LREIQPCLAESRAAREKESF 903


>gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]
          Length = 841

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 206 LPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNL 265
           L D + PQ RR+  +L E++ S+   + ++++RLL+     +  L D L  + H    + 
Sbjct: 407 LLDTLSPQERRMQESLFEVVTSE--ASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSN 464

Query: 266 FQPTQSGSLLYEVLVFAERLSEGRNAPH 293
            Q  Q  S  +     A  LS  R++PH
Sbjct: 465 VQRVQGVSERF----LATLLSRVRSSPH 488


>gi|31657094 anillin, actin binding protein [Homo sapiens]
          Length = 1124

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 10  GQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPLCSNSPICIARECPGPGERALPQEA 69
           G   + K++ S A  A    L+  +I + +K   P+ S + I  A+ C G     LP+  
Sbjct: 265 GDASLNKALSSSADDAS---LVNASISSSVKATSPVKSTTSITDAKSCEGQNPELLPKTP 321

Query: 70  PAPEASAVGGP 80
            +P  + V  P
Sbjct: 322 ISPLKTGVSKP 332


>gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]
          Length = 728

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 10/80 (12%)

Query: 54  ARECPGPGERALPQEAPAPEASAVGGPKGLAVERERHGRDSGELRRLLNSLECKQDEYAK 113
           A++   PG RALP   P   A A   P GL  E E H R +     L   L+ K+   AK
Sbjct: 510 AKDLGSPGARALPSAVPDAAAPA-DAPSGLEAELE-HLRQA-----LEGGLDTKE---AK 559

Query: 114 SMILHSITRCVYLLEAEASA 133
              LH + +     E + SA
Sbjct: 560 EKFLHEVVKMRVKQEEKLSA 579


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 58  PGP-GERALPQEAPAPEASAVGGPKGLAVERERHG 91
           PGP GER  P     P A  V GPKG A ER   G
Sbjct: 481 PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPG 515


>gi|222144293 karyopherin alpha 1 [Homo sapiens]
          Length = 538

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 218 MPALMEILQSDYILAQVQAVRLLSYLAQKNDLLYD-ILNCQVHSNFLNLFQPTQSGSLLY 276
           +P  +E+L S++   Q QAV  L  +A  + +  D +L+C +    L LF      ++  
Sbjct: 171 VPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTR 230

Query: 277 EVLVFAERLSEGRNAP 292
             +     L  G++ P
Sbjct: 231 NAVWALSNLCRGKSPP 246


>gi|157412259 notch1-induced protein isoform a [Homo sapiens]
          Length = 451

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 238 RLLSYLAQKN-DLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHV 296
           +LLS L + +  +LY ++   VH     L  P+Q    L ++  FA+ + E     +  +
Sbjct: 353 KLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLL 412

Query: 297 VKWHYNEQSLHESL 310
           + +  ++Q L ESL
Sbjct: 413 ISYPQDDQKLQESL 426


>gi|157671913 notch1-induced protein isoform b [Homo sapiens]
          Length = 401

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 238 RLLSYLAQKN-DLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHV 296
           +LLS L + +  +LY ++   VH     L  P+Q    L ++  FA+ + E     +  +
Sbjct: 303 KLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLL 362

Query: 297 VKWHYNEQSLHESL 310
           + +  ++Q L ESL
Sbjct: 363 ISYPQDDQKLQESL 376


>gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog,
          yeast) [Homo sapiens]
          Length = 545

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 14/27 (51%), Positives = 14/27 (51%)

Query: 54 ARECPGPGERALPQEAPAPEASAVGGP 80
          A   P P   A P  APAP A AVG P
Sbjct: 31 ATAAPAPAAPAAPAPAPAPAAQAVGWP 57


>gi|239754614 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 490

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 8/98 (8%)

Query: 22  ATGAGAIYLLYKA-IKAGIKCKP--PLCSNSPICIARECPGPGERALPQEAPAPEASAVG 78
           A GAGA +LL  A +     C+P  PL  N+    A      G R       APE     
Sbjct: 44  AAGAGAAHLLAGAWLVLSTSCRPRAPLMLNASAACAPATLALGFRVFAAAITAPEEEKKA 103

Query: 79  GPKGLAVERERHGRD-----SGELRRLLNSLECKQDEY 111
                + E+ R GRD     SG++      L C +  Y
Sbjct: 104 TRHAESPEQARRGRDALSGSSGKVGAPSPPLACPRRRY 141


>gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
          Length = 138

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 6/43 (13%)

Query: 41 CKPPLCSNSPIC----IARECPGPGERA-LPQEA-PAPEASAV 77
          C PPL +++P        R  PGPG RA  PQ A PAP   A+
Sbjct: 15 CLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGAL 57


>gi|38788219 zinc finger protein 428 [Homo sapiens]
          Length = 188

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/46 (34%), Positives = 19/46 (41%)

Query: 43  PPLCSNSPICIARECPGPGERALPQEAPAPEASAVGGPKGLAVERE 88
           PP     P    +E P P  RAL +E   P  +  G P G   E E
Sbjct: 109 PPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEE 154


>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
          Length = 4024

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 12/86 (13%)

Query: 93   DSGELRRLLNSLECKQDEYAKSMIL--------HSITRCVYLLE---AEASACTTDDIVL 141
            D+  +R L+N ++C  D++A  + L        +S+   ++L     +  ++CT DD + 
Sbjct: 1809 DTNLVRSLMNLIDCFMDDFADEVKLKERNDRETYSLLEGIFLFSLIWSVGASCTDDDRLK 1868

Query: 142  LGYMLDD-KDNSVKTQALNTLKAFSG 166
               +L +  ++ +  +  NT K  SG
Sbjct: 1869 FNKILRELMESPISDRTRNTFKLQSG 1894


>gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Homo
           sapiens]
          Length = 408

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 71/313 (22%), Positives = 116/313 (37%), Gaps = 58/313 (18%)

Query: 57  CPGPGERALPQEAPAPEASAVGGPKGLAVERERHGR----DSGELRRLLN-------SLE 105
           C GPGE   P +          GP   A+E+ER  R        L+ LL        +L 
Sbjct: 21  CAGPGESCFPSD----------GPLVCALEQERRLRLPPKPPPPLQPLLRGGQGLEAALS 70

Query: 106 CKQD-EYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNTLKAF 164
           C +   Y +  ++ S      L EA     T   +VLL   L  +    + Q L  +  F
Sbjct: 71  CPRFLRYPRQHLISS------LAEARPEELTPHVMVLLAQHL-ARHRLREPQLLEAIAHF 123

Query: 165 SGIRKFRLKIQEHSIKVLELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEI 224
             +++ +L     S KV++ +         +     LN LPL        ++ MP L  I
Sbjct: 124 LVVQETQL-----SSKVVQKL---------VLPFGRLNYLPLE-------QQFMPCLERI 162

Query: 225 LQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAER 284
           L  +  +A +  V +L  L Q   L +  L+      F+N    T    ++   L   + 
Sbjct: 163 LAREAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLSLLDT 222

Query: 285 LSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQ 344
             E    P Y   +    +Q     +F  +  + DR      H  +D+  +  + ++  +
Sbjct: 223 AVE-LELPGYRGPRLPRRQQ---VPIF-PQPLITDRARCKYSH--KDIVAEGLRQLLGEE 275

Query: 345 -YPQDLRARPSSC 356
            Y QDL   P  C
Sbjct: 276 KYRQDLTVPPGYC 288


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,205,391
Number of Sequences: 37866
Number of extensions: 669043
Number of successful extensions: 2540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2522
Number of HSP's gapped (non-prelim): 45
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.