Guide to the Human Genome
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Name: BTBD17 Sequence: fasta or formatted (478aa) NCBI GI: 122937327
Description:

BTB (POZ) domain containing 17

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         67           2
 C cysteine            0.6          3           1
 D aspartate           4.0         19           2
 E glutamate           4.4         21           2
 F phenylalanine       3.6         17           2
 G glycine             7.3         35           2
 H histidine           4.0         19           1
 I isoleucine          1.7          8           1
 K lysine              1.5          7           1
 L leucine            13.6         65           3
 M methionine          0.8          4           1
 N asparagine          2.3         11           2
 P proline             5.9         28           3
 Q glutamine           5.6         27           2
 R arginine            7.7         37           2
 S serine              6.5         31           2
 T threonine           3.6         17           1
 V valine              7.5         36           2
 W tryptophan          2.3         11           1
 Y tyrosine            3.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 17 
LGALS3BP              0.104   galectin 3 binding protein 
KLHL8                 0.032   kelch-like 8 
KEAP1                 0.031   kelch-like ECH-associated protein 1 
KEAP1                 0.031   kelch-like ECH-associated protein 1 
LOC149478             0.029   hypothetical protein LOC149478 
KBTBD8                0.028   T-cell activation kelch repeat protein 
KLHL1                 0.027   kelch-like 1 protein 
KLHL4                 0.026   kelch-like 4 isoform 2 
KLHL4                 0.026   kelch-like 4 isoform 1 
IPP                   0.026   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.026   intracisternal A particle-promoted polypeptide isof...
KLHL28                0.023   BTB (POZ) domain containing 5 
KLHL13                0.023   kelch-like 13 
KLHL17                0.022   kelch-like 17 
KLHL30                0.021   kelch-like 30 
KLHL26                0.021   kelch-like 26 
KLHL11                0.020   kelch-like 11 
ABTB1                 0.020   ankyrin repeat and BTB (POZ) domain containing 1 iso...
ABTB1                 0.020   ankyrin repeat and BTB (POZ) domain containing 1 iso...
RCBTB2                0.020   regulator of chromosome condensation and BTB domain c...
KLHL5                 0.019   kelch-like 5 isoform 3 
KLHL5                 0.019   kelch-like 5 isoform 1 
KLHL9                 0.019   kelch-like 9 
KLHL20                0.018   kelch-like 20 
ZBTB44                0.018   zinc finger and BTB domain containing 44 
BTBD9                 0.017   BTB (POZ) domain containing 9 isoform a 
BTBD9                 0.017   BTB (POZ) domain containing 9 isoform a 
ZBTB34                0.017   zinc finger and BTB domain containing 34 
ZBTB37                0.016   zinc finger and BTB domain containing 37 isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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