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Search of human proteins with 28376635
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 432 e-122
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 353 5e-98
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 284 4e-77
gi|16933567 mel transforming oncogene [Homo sapiens] 184 4e-47
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 181 4e-46
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 174 5e-44
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 172 1e-43
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 172 2e-43
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 171 4e-43
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 171 4e-43
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 171 4e-43
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 171 4e-43
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 167 8e-42
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 165 3e-41
gi|19923483 GTPase Rab14 [Homo sapiens] 160 6e-40
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 157 5e-39
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 156 1e-38
gi|50234889 RAB43 protein [Homo sapiens] 155 2e-38
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 152 3e-37
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 152 3e-37
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 151 5e-37
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 150 8e-37
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 150 8e-37
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 150 8e-37
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 150 1e-36
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 149 1e-36
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 149 2e-36
gi|40255119 RAS and EF-hand domain containing [Homo sapiens] 149 2e-36
gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 148 3e-36
gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 148 3e-36
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 432 bits (1112), Expect = e-122
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MDLQRPDSYQGGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGF 60
MDLQRPDSYQGGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGF
Sbjct: 1 MDLQRPDSYQGGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGF 60
Query: 61 TNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTE 120
TNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTE
Sbjct: 61 TNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTE 120
Query: 121 IHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAI 180
IHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAI
Sbjct: 121 IHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAI 180
Query: 181 AKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM 216
AKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
Sbjct: 181 AKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM 216
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 353 bits (907), Expect = 5e-98
Identities = 177/193 (91%), Positives = 183/193 (94%)
Query: 24 KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQE 83
K +L+GD+GVGKT L+QF G F+ G+F ATVGI F NKVVTVDGVRVKLQIWDTAGQE
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 84 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 143
RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 150
Query: 144 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYV 203
RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYV
Sbjct: 151 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYV 210
Query: 204 ESQKKRSSCCSFM 216
ESQKKRSSCCSFM
Sbjct: 211 ESQKKRSSCCSFM 223
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 284 bits (727), Expect = 4e-77
Identities = 139/202 (68%), Positives = 166/202 (82%), Gaps = 1/202 (0%)
Query: 12 GAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVR 71
G G DF D V K +LVGDSGVGKT LLV+F G F+ G+F +TVGI F NKV+ VDGV+
Sbjct: 54 GGGVDFYD-VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVK 112
Query: 72 VKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVI 131
VKLQ+WDTAGQERFRSVTHAYYRDA ALLLLYD+TNK+SFDNI+AWLTEIHEYAQ DV +
Sbjct: 113 VKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVAL 172
Query: 132 MLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ 191
MLLGNK D + ERV++ EDGE LA+EYG+PF+ETSAKTG+NV+LAF AIAKELK R+
Sbjct: 173 MLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKA 232
Query: 192 ADEPSFQIRDYVESQKKRSSCC 213
EP F++ DYV+ + + +SCC
Sbjct: 233 PSEPRFRLHDYVKREGRGASCC 254
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 184 bits (468), Expect = 4e-47
Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 5/194 (2%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +L+GDSGVGKT +L +F + F +F +T+GI F + + +DG R+KLQIWDTAG
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAF-NSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 66
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QERFR++T AYYR A ++L+YDITN+ SFDNIR W+ I E+A DV M+LGNK D++
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVN 126
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQAD----EPSF 197
+R + E GE LA +YG+ F+ETSAK +NVE AF +A+++K + + + + S
Sbjct: 127 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSN 186
Query: 198 QIRDYVESQKKRSS 211
Q Q+KRSS
Sbjct: 187 QGVKITPDQQKRSS 200
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 181 bits (459), Expect = 4e-46
Identities = 87/173 (50%), Positives = 123/173 (71%), Gaps = 1/173 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +L+GDSGVGKT LL +F + F +F +T+GI F + + +DG ++KLQIWDTAG
Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNT-TFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QERFR++T AYYR A ++L+YDITN+ SFDNI+ W+ I E+A DV M+LGNK DM+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADE 194
+R + E GE LA +YG+ FLETSAK+ NVE AF +A+++ + + ++
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMND 179
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 174 bits (441), Expect = 5e-44
Identities = 81/163 (49%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K I++GD+GVGK+ LL+QF +F P T+G+ F +++T+DG ++KLQIWDTAG
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQP-VHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QE FRS+T +YYR A LL+YDIT + +F+++ WL + +++ ++VIML+GNK+D+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
S R ++ E+GE ARE+G+ F+ETSAKT NVE AF+ AKE+
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 172 bits (437), Expect = 1e-43
Identities = 89/201 (44%), Positives = 135/201 (67%), Gaps = 10/201 (4%)
Query: 19 DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78
DH L K +L+GDSGVGKT L+++F + F ++ +T+GI F + V ++G ++KLQ+WD
Sbjct: 6 DH-LFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 79 TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138
TAGQERF+++T AYYR A ++L+YDIT++ SF+NI+ W+ I E A V +LLGNK
Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKC 123
Query: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY-----RAGHQAD 193
DM ++R ++ E + LARE+G+ F ETSAK+ MNV+ AF ++A+++ R+G+
Sbjct: 124 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 183
Query: 194 EPSFQIRDYVESQKKRSSCCS 214
PS D KK ++ CS
Sbjct: 184 PPS---TDLKTCDKKNTNKCS 201
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 172 bits (436), Expect = 2e-43
Identities = 81/163 (49%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K I++GD+GVGK+ LL+QF +F P T+G+ F ++V +DG ++KLQIWDTAG
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQP-VHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QE FRS+T +YYR A LL+YDIT + +F+++ +WL + +++ ++VIML+GNK+D+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
S R ++ E+GE ARE+G+ F+ETSAKT NVE AF+ AKE+
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 171 bits (433), Expect = 4e-43
Identities = 81/171 (47%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Query: 19 DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78
DH L K +L+GDSGVGKT L+++F + F ++ +T+GI F + V ++G ++KLQ+WD
Sbjct: 130 DH-LFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
Query: 79 TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138
TAGQERF+++T AYYR A ++L YDIT++ SF+NI+ W+ I E A V +LLGNK
Sbjct: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
Query: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189
DM ++R ++ E + LARE+G+ F ETSAK+ MNV+ AF ++A+++ ++G
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 298
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 171 bits (433), Expect = 4e-43
Identities = 81/171 (47%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Query: 19 DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78
DH L K +L+GDSGVGKT L+++F + F ++ +T+GI F + V ++G ++KLQ+WD
Sbjct: 130 DH-LFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
Query: 79 TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138
TAGQERF+++T AYYR A ++L YDIT++ SF+NI+ W+ I E A V +LLGNK
Sbjct: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
Query: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189
DM ++R ++ E + LARE+G+ F ETSAK+ MNV+ AF ++A+++ ++G
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 298
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 171 bits (433), Expect = 4e-43
Identities = 81/171 (47%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Query: 19 DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78
DH L K +L+GDSGVGKT L+++F + F ++ +T+GI F + V ++G ++KLQ+WD
Sbjct: 130 DH-LFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
Query: 79 TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138
TAGQERF+++T AYYR A ++L YDIT++ SF+NI+ W+ I E A V +LLGNK
Sbjct: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
Query: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189
DM ++R ++ E + LARE+G+ F ETSAK+ MNV+ AF ++A+++ ++G
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 298
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 171 bits (433), Expect = 4e-43
Identities = 84/164 (51%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
Query: 21 VLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTA 80
+L K +L+GDSGVGKT +L +F F +F +T+GI F K V + G ++KLQIWDTA
Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNT-TFISTIGIDFKIKTVELQGKKIKLQIWDTA 66
Query: 81 GQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADM 140
GQERF ++T +YYR A ++L+YDITN SF+NI WL I E+A DV MLLGNK DM
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126
Query: 141 SSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
+RV+ G +ARE+G+ F ETSAK +N+E AFL +A+++
Sbjct: 127 DDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 167 bits (422), Expect = 8e-42
Identities = 82/196 (41%), Positives = 129/196 (65%), Gaps = 6/196 (3%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +L+GDSGVGK+ LL++F + S+ +T+G+ F + + +DG +KLQIWDTAG
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTE-SYISTIGVDFKIRTIELDGKTIKLQIWDTAG 66
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QERFR++T +YYR A ++++YD+T++ S+ N++ WL EI YA +V +L+GNK+D++
Sbjct: 67 QERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLT 126
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQA----DEPSF 197
+++V+ + + A G+PFLETSAK NVE AF+ +A E+K R G A + P+
Sbjct: 127 TKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNL 186
Query: 198 QIRDYVESQKKRSSCC 213
+I D + CC
Sbjct: 187 KI-DSTPVKPAGGGCC 201
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 165 bits (417), Expect = 3e-41
Identities = 76/168 (45%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +L+GDSGVGK+ LL++F + S+ +T+G+ F + + +DG +KLQIWDTAG
Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTE-SYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QERFR++T +YYR A ++++YD+T++ SF+N++ WL EI YA +V +L+GNK D++
Sbjct: 70 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLT 129
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189
+++V+ + A G+PFLETSAK NVE +F+ +A E+K R G
Sbjct: 130 TKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 160 bits (406), Expect = 6e-40
Identities = 78/168 (46%), Positives = 116/168 (69%), Gaps = 1/168 (0%)
Query: 17 FNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQI 76
+N + K I++GD GVGK+ LL QF + KF+ T+G+ F +++ V G ++KLQI
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM-ADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 77 WDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGN 136
WDTAGQERFR+VT +YYR A L++YDIT +S+++++ +WLT+ + VI+L+GN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 137 KADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
KAD+ ++R + E+ + A E G+ FLE SAKTG NVE AFL AK++
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 157 bits (398), Expect = 5e-39
Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Query: 16 DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75
D N L K IL+GDS VGKT ++ F G + + T+G+ FT + + +DG +VK+Q
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQN-TIGVDFTVRSLDIDGKKVKMQ 69
Query: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
+WDTAGQERFR++T +YYR A A ++ YD+T +S+F++I W+ EI +Y +VVIML+G
Sbjct: 70 VWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIG 129
Query: 136 NKADMSSERVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKEL 184
NK D+ +R + ED TLA +YG + LETSAK N+E F+ +AKEL
Sbjct: 130 NKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 156 bits (394), Expect = 1e-38
Identities = 80/163 (49%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +L+G++GVGKT L+ +F QG F PG AT+G+ F K V ++G +VKLQIWDTAG
Sbjct: 9 LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ-GATIGVDFMIKTVEINGEKVKLQIWDTAG 67
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QERFRS+T +YYR A AL+L YDIT + SF + WL EI +YA V+ +L+GNK D++
Sbjct: 68 QERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLA 127
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
R + + E + + +LETSAK NVE FL +A L
Sbjct: 128 ERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 155 bits (392), Expect = 2e-38
Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 11 GGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGV 70
G PD L K +LVGD+ VGKT ++ +F G F S T+G+ FT K + + G
Sbjct: 7 GPGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGS-TIGVDFTMKTLEIQGK 65
Query: 71 RVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVV 130
RVKLQIWDTAGQERFR++T +YYR A +L YDIT +SSF ++ W+ ++ +YA ++V
Sbjct: 66 RVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIV 125
Query: 131 IMLLGNKADMSSERVIRSEDGETLAREYGV-PFLETSAKTGMNVELAFLAIAKELKYRAG 189
+L+GNK+D+S R + + ++LA Y + +ETSAK NVE AFL +A EL R G
Sbjct: 126 QLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHG 185
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 152 bits (383), Expect = 3e-37
Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 4/194 (2%)
Query: 24 KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQE 83
K +L+G+S VGK+SL+++F +G+F S T+G F + V +D VK +IWDTAGQE
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 84 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 143
R+ S+ YYR AQA +++YDITN+ +F + W+ E+ A +VI L GNKAD++++
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 144 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRD-- 201
R++ E+ + A + + F+ETSAKT MNV FLAIAK+L + + R
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
Query: 202 -YVESQKKRSSCCS 214
+ +SQ+ +S CCS
Sbjct: 201 LHEQSQQNKSQCCS 214
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 152 bits (383), Expect = 3e-37
Identities = 82/199 (41%), Positives = 124/199 (62%), Gaps = 7/199 (3%)
Query: 19 DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78
DH L K +++GDSGVGK+SLL++F F GS+ T+G+ F + V ++G +VKLQIWD
Sbjct: 6 DH-LFKLLIIGDSGVGKSSLLLRFADNTF-SGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 79 TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138
TAGQERFR++T YYR ++++YD+T+ SF N++ WL EI++ DV +L+GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
Query: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAK-ELKYRAGHQADEPSF 197
D +V+ +ED A + G+ ETSAK +NVE F I + L+ + + A +
Sbjct: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182
Query: 198 QIRDYV---ESQKKRSSCC 213
Q D V ++ K++ CC
Sbjct: 183 QQNDVVKLTKNSKRKKRCC 201
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 151 bits (381), Expect = 5e-37
Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +L+GDSGVGK++LL +F + +F S S T+G+ F + + VDG +K QIWDTAG
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIKAQIWDTAG 69
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QER+R++T AYYR A LL+YDI +++N+ WL E+ ++A ++VIML+GNK+D+
Sbjct: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 129
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
R + +++ A + G+ F+ETSA NVE AF I E+
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 150 bits (379), Expect = 8e-37
Identities = 75/162 (46%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 16 DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75
D N + K +++G+S VGKTS L ++ F P +F +TVGI F K + + R+KLQ
Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTP-AFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
IWDTAGQER+R++T AYYR A +L+YDITN+ SF+ ++ W T+I Y+ + ++L+G
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVG 134
Query: 136 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 177
NK DM ERV+ SE G LA G F E SAK +NV+ F
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTF 176
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 150 bits (379), Expect = 8e-37
Identities = 78/163 (47%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
L K +++G +G GK+ LL QF + KF S + T+G+ F ++VV V G VKLQIWDTAG
Sbjct: 8 LFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIWDTAG 66
Query: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
QERFRSVT +YYR A LL+YDIT++ +++++ AWLT+ A ++V++L GNK D+
Sbjct: 67 QERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLD 126
Query: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
ER + + A+E + FLETSA TG NVE AFL A+ +
Sbjct: 127 PEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 150 bits (379), Expect = 8e-37
Identities = 79/169 (46%), Positives = 107/169 (63%), Gaps = 5/169 (2%)
Query: 13 AGP----DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVD 68
AGP D N + K +L+G+S VGKTS L ++ F P +F +TVGI F K V
Sbjct: 9 AGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTP-AFVSTVGIDFKVKTVYRH 67
Query: 69 GVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRD 128
R+KLQIWDTAGQER+R++T AYYR A LL+YDI N+ SF ++ W T+I Y+ +
Sbjct: 68 DKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDN 127
Query: 129 VVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 177
++L+GNK D+ ERV+ +EDG LA + G F E SAK +NV+ F
Sbjct: 128 AQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 150 bits (378), Expect = 1e-36
Identities = 76/162 (46%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 16 DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75
D N + K +++G+S VGKTS L ++ F P +F +TVGI F K V RVKLQ
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTP-AFVSTVGIDFKVKTVYRHEKRVKLQ 74
Query: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
IWDTAGQER+R++T AYYR A +L+YDITN+ SF+ ++ W T+I Y+ + ++L+G
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Query: 136 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 177
NK DM ERV+ +E G+ LA + G F E SAK ++V AF
Sbjct: 135 NKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAF 176
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 149 bits (377), Expect = 1e-36
Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 5/205 (2%)
Query: 14 GPDFNDHVLH-KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRV 72
GP+ + + K +L+G+S VGK+SL+++F +G+F S T+G F + V +D V
Sbjct: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES-TIGAAFLTQTVCLDDTTV 69
Query: 73 KLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIM 132
K +IWDTAGQER+ S+ YYR AQA +++YDITN+ SF + W+ E+ A ++VI
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 129
Query: 133 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQA 192
L GNKAD++++R + ++ ++ A + + F+ETSAKT MNV F+AIAK+L
Sbjct: 130 LSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNP 189
Query: 193 DEPSFQIR--DYVE-SQKKRSSCCS 214
S + R D E +Q R+ CCS
Sbjct: 190 GANSARGRGVDLTEPTQPTRNQCCS 214
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 149 bits (376), Expect = 2e-36
Identities = 75/162 (46%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 16 DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75
D N + K +++G+S VGKTS L ++ F +F +TVGI F K V + R+KLQ
Sbjct: 24 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFT-SAFVSTVGIDFKVKTVFKNEKRIKLQ 82
Query: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
IWDTAGQER+R++T AYYR A +L+YDITN+ SF+ ++ W T+I Y+ + ++L+G
Sbjct: 83 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 142
Query: 136 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 177
NK DM ERVI +E G+ L + G F ETSAK +NV+ F
Sbjct: 143 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 184
>gi|40255119 RAS and EF-hand domain containing [Homo sapiens]
Length = 740
Score = 149 bits (376), Expect = 2e-36
Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 14/208 (6%)
Query: 17 FNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQI 76
F+ +K +L GD+ VGK+S L++ + +F + SAT+G+ F K + VDG R LQ+
Sbjct: 536 FSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRE-NISATLGVDFQMKTLIVDGERTVLQL 594
Query: 77 WDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGN 136
WDTAGQERFRS+ +Y+R A +LLLYD+T + SF NIR W+ I + A V IML+GN
Sbjct: 595 WDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGN 654
Query: 137 KADM------SSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGH 190
KAD+ ++ + GE LA YG F ETSAK G N+ A L +A+E+K R
Sbjct: 655 KADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRTD- 713
Query: 191 QADEPSFQIRDYVESQKKRS----SCCS 214
+ S I + + K+S +CC+
Sbjct: 714 --KDDSRSITNLTGTNSKKSPQMKNCCN 739
>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 148 bits (374), Expect = 3e-36
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 24/213 (11%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVV----------TVDGVR 71
L K + +GDSGVGKTS+L Q+ GKF F TVGI F K V T G R
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKF-NSKFITTVGIDFREKRVVYRASGPDGATGRGQR 67
Query: 72 VKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQRDV 129
+ LQ+WDTAGQERFRS+T A++RDA LLL+D+TN+ SF N+R W++++ H Y +
Sbjct: 68 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD 127
Query: 130 VIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189
++ L GNK+D+ +RV++ E+ LA +YG+P+ ETSA G N+ A + + R
Sbjct: 128 IV-LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRME 186
Query: 190 HQADE---PSFQIR-------DYVESQKKRSSC 212
D+ P +R D + +K++ +C
Sbjct: 187 RCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219
>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 148 bits (374), Expect = 3e-36
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 24/213 (11%)
Query: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVV----------TVDGVR 71
L K + +GDSGVGKTS+L Q+ GKF F TVGI F K V T G R
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKF-NSKFITTVGIDFREKRVVYRASGPDGATGRGQR 67
Query: 72 VKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQRDV 129
+ LQ+WDTAGQERFRS+T A++RDA LLL+D+TN+ SF N+R W++++ H Y +
Sbjct: 68 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD 127
Query: 130 VIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189
++ L GNK+D+ +RV++ E+ LA +YG+P+ ETSA G N+ A + + R
Sbjct: 128 IV-LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRME 186
Query: 190 HQADE---PSFQIR-------DYVESQKKRSSC 212
D+ P +R D + +K++ +C
Sbjct: 187 RCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,271,493
Number of Sequences: 37866
Number of extensions: 265219
Number of successful extensions: 1147
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 254
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.