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Search of human proteins with 28372569
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28372569 zona pellucida-like domain containing 1 [Homo
sapiens]
(431 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28372569 zona pellucida-like domain containing 1 [Homo sapiens] 876 0.0
gi|17158035 tectorin beta [Homo sapiens] 90 5e-18
gi|56550049 uromodulin precursor [Homo sapiens] 85 1e-16
gi|59850812 uromodulin precursor [Homo sapiens] 85 1e-16
gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2 [... 72 7e-13
gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1 [... 72 7e-13
gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4 [... 72 7e-13
gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3 [... 72 7e-13
gi|134268640 tectorin alpha precursor [Homo sapiens] 69 1e-11
gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens] 54 4e-07
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 54 4e-07
gi|56682966 transforming growth factor, beta receptor III [Homo ... 49 7e-06
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 49 1e-05
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 49 1e-05
gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 49 1e-05
gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 49 1e-05
gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 49 1e-05
gi|4508045 zona pellucida glycoprotein 2 preproprotein [Homo sap... 45 1e-04
gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens] 44 4e-04
gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo sa... 42 8e-04
gi|4885065 amyloid precursor-like protein 1 isoform 2 precursor ... 33 0.38
gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor... 33 0.65
gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens] 32 1.5
gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens] 32 1.5
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens] 32 1.5
gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens] 31 1.9
gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens] 31 1.9
gi|50233787 nuclear protein in testis [Homo sapiens] 30 5.5
gi|38679909 testis expressed sequence 2 [Homo sapiens] 29 9.4
>gi|28372569 zona pellucida-like domain containing 1 [Homo sapiens]
Length = 431
Score = 876 bits (2263), Expect = 0.0
Identities = 431/431 (100%), Positives = 431/431 (100%)
Query: 1 MMLRFSMCRGNDEGFAMEQIWLLLLLTIRVLPGSAQFNGYNCDANLHSRFPAERDISVYC 60
MMLRFSMCRGNDEGFAMEQIWLLLLLTIRVLPGSAQFNGYNCDANLHSRFPAERDISVYC
Sbjct: 1 MMLRFSMCRGNDEGFAMEQIWLLLLLTIRVLPGSAQFNGYNCDANLHSRFPAERDISVYC 60
Query: 61 GVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGC 120
GVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGC
Sbjct: 61 GVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGC 120
Query: 121 GNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSYPLEYLVN 180
GNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSYPLEYLVN
Sbjct: 121 GNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSYPLEYLVN 180
Query: 181 NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNL 240
NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNL
Sbjct: 181 NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNL 240
Query: 241 DGRWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDPQTTVIENGRSQRGRFSFEVFRFVKH 300
DGRWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDPQTTVIENGRSQRGRFSFEVFRFVKH
Sbjct: 241 DGRWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDPQTTVIENGRSQRGRFSFEVFRFVKH 300
Query: 301 KNQKMSTVFLHCVTKLCRADDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGPII 360
KNQKMSTVFLHCVTKLCRADDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGPII
Sbjct: 301 KNQKMSTVFLHCVTKLCRADDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGPII 360
Query: 361 TRSDETPTNNSQLGSPSMPPFQLNAITSALISGMVILGVTSFSLLLCSLALLHRKGPTSL 420
TRSDETPTNNSQLGSPSMPPFQLNAITSALISGMVILGVTSFSLLLCSLALLHRKGPTSL
Sbjct: 361 TRSDETPTNNSQLGSPSMPPFQLNAITSALISGMVILGVTSFSLLLCSLALLHRKGPTSL 420
Query: 421 VLNGIRNPVFD 431
VLNGIRNPVFD
Sbjct: 421 VLNGIRNPVFD 431
>gi|17158035 tectorin beta [Homo sapiens]
Length = 329
Score = 89.7 bits (221), Expect = 5e-18
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 34/299 (11%)
Query: 43 DANLHSRFPAERD-ISVYCGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINN 101
+A+ S P + D I V+C + I KI C G+ LAL G C ++
Sbjct: 14 EASAKSCAPNKADVILVFCYPKTIITKIPECPY---GWEVHQLALGGL-----CYNGVHE 65
Query: 102 NTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISY 161
+ VI ++ CG S Y + + +I + D I+
Sbjct: 66 GGYYQFVIPDLSPKNKSYCGTQ---------SEY----KPPIYHFYSHIVSNDTTVIVKN 112
Query: 162 LPGLLYKFSCSYPLEYLVNNTQLASSSAAISVRENN-GTFVSTLNLLLYNDSTYNQQLII 220
P + Y FSC+Y YLVN A + V+ + GTF S L+L Y ++ ++ +
Sbjct: 113 QP-VNYSFSCTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEA 171
Query: 221 PSI--GLPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLF-LSCDKDPQT 277
P + + + +FA V+A L R+ V+++ C+ TPS + +++ L C D
Sbjct: 172 PFVLEASEIGSDLFAGVEAKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETV 231
Query: 278 TVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRAD--DCPFLMPICSHRER 334
V ENGR R F F FRF K+S V+LHC T +C ++ CP C R+R
Sbjct: 232 LVHENGRDHRATFQFNAFRF--QNIPKLSKVWLHCETFICDSEKLSCPV---TCDKRKR 285
>gi|56550049 uromodulin precursor [Homo sapiens]
Length = 640
Score = 85.1 bits (209), Expect = 1e-16
Identities = 98/345 (28%), Positives = 145/345 (42%), Gaps = 55/345 (15%)
Query: 60 CGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEG 119
CG + + + C + G+ + + L+ DS C GF N+ + ++ +
Sbjct: 335 CGANDMKVSLGKCQLKSLGFDKVFMYLS----DSRCSGF--NDRDNRDWVSVVTPARDGP 388
Query: 120 CGNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSYPLEYLV 179
CG L N T N D II + F+CSYPL+ V
Sbjct: 389 CGTVLT----------RNETHATYSNTLYLADE-----IIIRDLNIKINFACSYPLDMKV 433
Query: 180 N-NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQAT 238
+ T L +A+++R GT + T+ + L+ +Y Q S+ L T+ F V T
Sbjct: 434 SLKTALQPMVSALNIRVG-GTGMFTVRMALFQTPSYTQPYQGSSV--TLSTEAFLYV-GT 489
Query: 239 NLDG----RWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDPQTT-----VIENGRSQRGR 289
LDG R+ +LM CY TPS N D ++Y F+ D+ P T V+ENG S +GR
Sbjct: 490 MLDGGDLSRFALLMTNCYATPSSNATDPLKY--FIIQDRCPHTRDSTIQVVENGESSQGR 547
Query: 290 FSFEVFRFVKHKNQKMSTVFLHCVTKLCRA--DDCPFLMPICSHRERRDAGRRTTWSPQS 347
FS ++FRF + V+LHC LC + C P CS R S
Sbjct: 548 FSVQMFRFAGN----YDLVYLHCEVYLCDTMNEKC---KPTCSGTRFR--------SGSV 592
Query: 348 SSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPFQLNAITSALIS 392
S VL+ GP ITR T + S + L + SA ++
Sbjct: 593 IDQSRVLNLGP-ITRKGVQATVSRAFSSLGLLKVWLPLLLSATLT 636
>gi|59850812 uromodulin precursor [Homo sapiens]
Length = 640
Score = 85.1 bits (209), Expect = 1e-16
Identities = 98/345 (28%), Positives = 145/345 (42%), Gaps = 55/345 (15%)
Query: 60 CGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEG 119
CG + + + C + G+ + + L+ DS C GF N+ + ++ +
Sbjct: 335 CGANDMKVSLGKCQLKSLGFDKVFMYLS----DSRCSGF--NDRDNRDWVSVVTPARDGP 388
Query: 120 CGNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSYPLEYLV 179
CG L N T N D II + F+CSYPL+ V
Sbjct: 389 CGTVLT----------RNETHATYSNTLYLADE-----IIIRDLNIKINFACSYPLDMKV 433
Query: 180 N-NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQAT 238
+ T L +A+++R GT + T+ + L+ +Y Q S+ L T+ F V T
Sbjct: 434 SLKTALQPMVSALNIRVG-GTGMFTVRMALFQTPSYTQPYQGSSV--TLSTEAFLYV-GT 489
Query: 239 NLDG----RWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDPQTT-----VIENGRSQRGR 289
LDG R+ +LM CY TPS N D ++Y F+ D+ P T V+ENG S +GR
Sbjct: 490 MLDGGDLSRFALLMTNCYATPSSNATDPLKY--FIIQDRCPHTRDSTIQVVENGESSQGR 547
Query: 290 FSFEVFRFVKHKNQKMSTVFLHCVTKLCRA--DDCPFLMPICSHRERRDAGRRTTWSPQS 347
FS ++FRF + V+LHC LC + C P CS R S
Sbjct: 548 FSVQMFRFAGN----YDLVYLHCEVYLCDTMNEKC---KPTCSGTRFR--------SGSV 592
Query: 348 SSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPFQLNAITSALIS 392
S VL+ GP ITR T + S + L + SA ++
Sbjct: 593 IDQSRVLNLGP-ITRKGVQATVSRAFSSLGLLKVWLPLLLSATLT 636
>gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2
[Homo sapiens]
Length = 534
Score = 72.4 bits (176), Expect = 7e-13
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 169 FSCSYPLEYLVN---NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGL 225
F C+YPL+ V+ Q SS +SV + NG F+ + + L+ D Y ++ L
Sbjct: 315 FQCAYPLDMKVSLQAALQPIVSSLNVSV-DGNGEFI--VRMALFQDQNYTNPYEGDAVEL 371
Query: 226 PLKTKVFA-AVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKDPQTT--VIE 281
+++ ++ A+ R+N+++ CY TP+ + D ++Y + SC +T V E
Sbjct: 372 SVESVLYVGAILEQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEE 431
Query: 282 NGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRA--DDCPFLMPICSHRERRDAGR 339
NG+S RFS ++F F H VFLHC LC + + C P CS + R
Sbjct: 432 NGQSSESRFSVQMFMFAGH----YDLVFLHCEIHLCDSLNEQC---QPSCSRSQVRS--- 481
Query: 340 RTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPF 381
+ + VL GPI R ++P G+PS F
Sbjct: 482 ----EVPAIDLARVLDLGPITRRGAQSP--GVMNGTPSTAGF 517
>gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1
[Homo sapiens]
Length = 537
Score = 72.4 bits (176), Expect = 7e-13
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 169 FSCSYPLEYLVN---NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGL 225
F C+YPL+ V+ Q SS +SV + NG F+ + + L+ D Y ++ L
Sbjct: 318 FQCAYPLDMKVSLQAALQPIVSSLNVSV-DGNGEFI--VRMALFQDQNYTNPYEGDAVEL 374
Query: 226 PLKTKVFA-AVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKDPQTT--VIE 281
+++ ++ A+ R+N+++ CY TP+ + D ++Y + SC +T V E
Sbjct: 375 SVESVLYVGAILEQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEE 434
Query: 282 NGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRA--DDCPFLMPICSHRERRDAGR 339
NG+S RFS ++F F H VFLHC LC + + C P CS + R
Sbjct: 435 NGQSSESRFSVQMFMFAGH----YDLVFLHCEIHLCDSLNEQC---QPSCSRSQVRS--- 484
Query: 340 RTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPF 381
+ + VL GPI R ++P G+PS F
Sbjct: 485 ----EVPAIDLARVLDLGPITRRGAQSP--GVMNGTPSTAGF 520
>gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4
[Homo sapiens]
Length = 387
Score = 72.4 bits (176), Expect = 7e-13
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 169 FSCSYPLEYLVN---NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGL 225
F C+YPL+ V+ Q SS +SV + NG F+ + + L+ D Y ++ L
Sbjct: 168 FQCAYPLDMKVSLQAALQPIVSSLNVSV-DGNGEFI--VRMALFQDQNYTNPYEGDAVEL 224
Query: 226 PLKTKVFA-AVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKDPQTT--VIE 281
+++ ++ A+ R+N+++ CY TP+ + D ++Y + SC +T V E
Sbjct: 225 SVESVLYVGAILEQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEE 284
Query: 282 NGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRA--DDCPFLMPICSHRERRDAGR 339
NG+S RFS ++F F H VFLHC LC + + C P CS + R
Sbjct: 285 NGQSSESRFSVQMFMFAGH----YDLVFLHCEIHLCDSLNEQC---QPSCSRSQVRS--- 334
Query: 340 RTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPF 381
+ + VL GPI R ++P G+PS F
Sbjct: 335 ----EVPAIDLARVLDLGPITRRGAQSP--GVMNGTPSTAGF 370
>gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3
[Homo sapiens]
Length = 390
Score = 72.4 bits (176), Expect = 7e-13
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 169 FSCSYPLEYLVN---NTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGL 225
F C+YPL+ V+ Q SS +SV + NG F+ + + L+ D Y ++ L
Sbjct: 171 FQCAYPLDMKVSLQAALQPIVSSLNVSV-DGNGEFI--VRMALFQDQNYTNPYEGDAVEL 227
Query: 226 PLKTKVFA-AVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKDPQTT--VIE 281
+++ ++ A+ R+N+++ CY TP+ + D ++Y + SC +T V E
Sbjct: 228 SVESVLYVGAILEQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEE 287
Query: 282 NGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRA--DDCPFLMPICSHRERRDAGR 339
NG+S RFS ++F F H VFLHC LC + + C P CS + R
Sbjct: 288 NGQSSESRFSVQMFMFAGH----YDLVFLHCEIHLCDSLNEQC---QPSCSRSQVRS--- 337
Query: 340 RTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPF 381
+ + VL GPI R ++P G+PS F
Sbjct: 338 ----EVPAIDLARVLDLGPITRRGAQSP--GVMNGTPSTAGF 373
>gi|134268640 tectorin alpha precursor [Homo sapiens]
Length = 2155
Score = 68.6 bits (166), Expect = 1e-11
Identities = 77/314 (24%), Positives = 129/314 (41%), Gaps = 43/314 (13%)
Query: 55 DISVYCGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINL 114
D V C + + I+ C + G+ + +N D C G I F + F IN
Sbjct: 1801 DAEVTCKAAQMEVSISKCKLFQLGFEREGVRIN----DRQCTG-IEGEDF---ISFQIN- 1851
Query: 115 STLEGCGNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSYP 174
+T CGN +V + Y N ++ N +G I T D + +FSC+Y
Sbjct: 1852 NTKGNCGN--IVQSNGTHIMYKNTLWIESANNTGNIITRDRTINV--------EFSCAYE 1901
Query: 175 LEYLVNNTQLASSSAAI---SVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKV 231
L+ ++ + ++ +V G+F++ + LY +++Y + L + +
Sbjct: 1902 LDIKISLDSVVKPMLSVINLTVPTQEGSFIT--KMALYKNASYKHPYRQGEVVLTTRDVL 1959
Query: 232 FAAVQATNLDGRWNVL-MDYCYTTPSGNPNDDIRYDLFL-SCD--KDPQTTVIENGRSQR 287
+ V D +L ++ CY TP+ + ND +RY + C KD + EN S
Sbjct: 1960 YVGVFVVGADATHLILTLNKCYATPTRDSNDKLRYFIIEGGCQNLKDNTIGIEENAVSLT 2019
Query: 288 GRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRAD--DCPFLMPICSHRERRDAGRRTTWSP 345
RF VF+F+ ++ V LHC LC ++ C C H R T P
Sbjct: 2020 CRFHVTVFKFIGDYDE----VHLHCAVSLCDSEKYSCKI---TCPHNSR--IATDYTKEP 2070
Query: 346 QSSSGSAVLSAGPI 359
+ ++S GPI
Sbjct: 2071 KEQ----IISVGPI 2080
>gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens]
Length = 1318
Score = 53.5 bits (127), Expect = 4e-07
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 29/222 (13%)
Query: 164 GLLYKFSCSYPLEYLVNNTQLASSS--------AAISVRENNGTFVSTLNLLLYNDSTYN 215
G+++ P+ N L SS I G FV+ + L + DS
Sbjct: 1068 GIIHHLKILSPIYCAFQNDLLTSSGFTLEWGVYTIIEDLHGAGNFVTEMQLFI-GDSPIP 1126
Query: 216 QQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDP 275
Q + S ++ +V Q +NL V++ C+ TPS N D I + + P
Sbjct: 1127 QNYSV-SASDDVRIEVGLYRQKSNL----KVVLTECWATPSSNARDPITFSFINNSCPVP 1181
Query: 276 QT--TVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRADDCPFLMPICSHRE 333
T VIENG S + +F +F F+ S V+LHC ++C C++
Sbjct: 1182 NTYTNVIENGNSNKAQFKLRIFSFIND-----SIVYLHCKLRVCMESPGATCKINCNNFR 1236
Query: 334 RRDAGRRTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGS 375
+S + +S GP+I E P + LG+
Sbjct: 1237 --------LLQNSETSATHQMSWGPLIRSEGEPPHAEAGLGA 1270
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 53.5 bits (127), Expect = 4e-07
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 29/222 (13%)
Query: 164 GLLYKFSCSYPLEYLVNNTQLASSS--------AAISVRENNGTFVSTLNLLLYNDSTYN 215
G+++ P+ N L SS I G FV+ + L + DS
Sbjct: 1196 GIIHHLKILSPIYCAFQNDLLTSSGFTLEWGVYTIIEDLHGAGNFVTEMQLFI-GDSPIP 1254
Query: 216 QQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFLSCDKDP 275
Q + S ++ +V Q +NL V++ C+ TPS N D I + + P
Sbjct: 1255 QNYSV-SASDDVRIEVGLYRQKSNL----KVVLTECWATPSSNARDPITFSFINNSCPVP 1309
Query: 276 QT--TVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRADDCPFLMPICSHRE 333
T VIENG S + +F +F F+ S V+LHC ++C C++
Sbjct: 1310 NTYTNVIENGNSNKAQFKLRIFSFIND-----SIVYLHCKLRVCMESPGATCKINCNNFR 1364
Query: 334 RRDAGRRTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGS 375
+S + +S GP+I E P + LG+
Sbjct: 1365 --------LLQNSETSATHQMSWGPLIRSEGEPPHAEAGLGA 1398
>gi|56682966 transforming growth factor, beta receptor III [Homo
sapiens]
Length = 851
Score = 49.3 bits (116), Expect = 7e-06
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 42/294 (14%)
Query: 56 ISVYCGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLS 115
+SV C + + + + + SGYS D+ L D C+ +N F + S
Sbjct: 452 LSVKCDNEKMIVAVEKDSFQASGYSGMDVTLL----DPTCKAKMNGTHF-------VLES 500
Query: 116 TLEGCGNNLVVSTIPGVSAYGNATSVQV---GNISGYIDT-PDPPTIISYLPGLLYKFSC 171
L GCG S + GV Y N+ +QV G+ SG+ D D + + PG + +
Sbjct: 501 PLNGCGTRPRWSALDGV-VYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDA 559
Query: 172 SYPL--EYLVNNTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGL---P 226
S E +V N L S +E + T N+ LYN + ++PS G+ P
Sbjct: 560 SLFTRPEIVVFNCSLQQVRNPSSFQEQPHGNI-TFNMELYNTDLF----LVPSQGVFSVP 614
Query: 227 LKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFLS-CDKDPQTTV------ 279
V+ V T + + C+ +P NP+ Y + + C KD
Sbjct: 615 ENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRV 674
Query: 280 ---IENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLC-RADDCPFLMPIC 329
I + RFSF VF+ V + S +FL C LC + + P +P C
Sbjct: 675 HFPIPQADMDKKRFSF-VFKPVFN----TSLLFLQCELTLCTKMEKHPQKLPKC 723
>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
Length = 1662
Score = 48.5 bits (114), Expect = 1e-05
Identities = 61/269 (22%), Positives = 101/269 (37%), Gaps = 34/269 (12%)
Query: 78 GYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGN 137
G+S +DL ++ +G CR I P +VIF I S GCG +
Sbjct: 1394 GFSASDLVISTWNGYYECRPQIT----PNLVIFTIPYS---GCGT------------FKQ 1434
Query: 138 ATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSY------PLEYLVNNTQLASSSAAI 191
A + + + S ++ II L SC Y+ N+T +++
Sbjct: 1435 ADNDTI-DYSNFLTAAVSGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQ 1493
Query: 192 SVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYC 251
G F +N+ Y S++ + + L ++ + + D + +D C
Sbjct: 1494 VEEVQYGNF--DVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDAVLTLFVDTC 1551
Query: 252 YTTPSGNPNDDIRYDLFLS-CDKDPQTTVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFL 310
+P N + YDL S C +D + + RF F F F+ + +V+L
Sbjct: 1552 VASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFL----NRFPSVYL 1607
Query: 311 HCVTKLCRA-DDCPFLMPICSHRERRDAG 338
C +CRA D C R +RD G
Sbjct: 1608 RCKMVVCRAYDPSSRCYRGCVLRSKRDVG 1636
>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
Length = 1788
Score = 48.5 bits (114), Expect = 1e-05
Identities = 61/269 (22%), Positives = 101/269 (37%), Gaps = 34/269 (12%)
Query: 78 GYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGN 137
G+S +DL ++ +G CR I P +VIF I S GCG +
Sbjct: 1520 GFSASDLVISTWNGYYECRPQIT----PNLVIFTIPYS---GCGT------------FKQ 1560
Query: 138 ATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSY------PLEYLVNNTQLASSSAAI 191
A + + + S ++ II L SC Y+ N+T +++
Sbjct: 1561 ADNDTI-DYSNFLTAAVSGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQ 1619
Query: 192 SVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYC 251
G F +N+ Y S++ + + L ++ + + D + +D C
Sbjct: 1620 VEEVQYGNF--DVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDAVLTLFVDTC 1677
Query: 252 YTTPSGNPNDDIRYDLFLS-CDKDPQTTVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFL 310
+P N + YDL S C +D + + RF F F F+ + +V+L
Sbjct: 1678 VASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFL----NRFPSVYL 1733
Query: 311 HCVTKLCRA-DDCPFLMPICSHRERRDAG 338
C +CRA D C R +RD G
Sbjct: 1734 RCKMVVCRAYDPSSRCYRGCVLRSKRDVG 1762
>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
[Homo sapiens]
Length = 2403
Score = 48.5 bits (114), Expect = 1e-05
Identities = 61/269 (22%), Positives = 101/269 (37%), Gaps = 34/269 (12%)
Query: 78 GYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGN 137
G+S +DL ++ +G CR I P +VIF I S GCG +
Sbjct: 2135 GFSASDLVISTWNGYYECRPQIT----PNLVIFTIPYS---GCGT------------FKQ 2175
Query: 138 ATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSY------PLEYLVNNTQLASSSAAI 191
A + + + S ++ II L SC Y+ N+T +++
Sbjct: 2176 ADNDTI-DYSNFLTAAVSGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQ 2234
Query: 192 SVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYC 251
G F +N+ Y S++ + + L ++ + + D + +D C
Sbjct: 2235 VEEVQYGNF--DVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDAVLTLFVDTC 2292
Query: 252 YTTPSGNPNDDIRYDLFLS-CDKDPQTTVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFL 310
+P N + YDL S C +D + + RF F F F+ + +V+L
Sbjct: 2293 VASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFL----NRFPSVYL 2348
Query: 311 HCVTKLCRA-DDCPFLMPICSHRERRDAG 338
C +CRA D C R +RD G
Sbjct: 2349 RCKMVVCRAYDPSSRCYRGCVLRSKRDVG 2377
>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
[Homo sapiens]
Length = 2413
Score = 48.5 bits (114), Expect = 1e-05
Identities = 61/269 (22%), Positives = 101/269 (37%), Gaps = 34/269 (12%)
Query: 78 GYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGN 137
G+S +DL ++ +G CR I P +VIF I S GCG +
Sbjct: 2145 GFSASDLVISTWNGYYECRPQIT----PNLVIFTIPYS---GCGT------------FKQ 2185
Query: 138 ATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSY------PLEYLVNNTQLASSSAAI 191
A + + + S ++ II L SC Y+ N+T +++
Sbjct: 2186 ADNDTI-DYSNFLTAAVSGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQ 2244
Query: 192 SVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYC 251
G F +N+ Y S++ + + L ++ + + D + +D C
Sbjct: 2245 VEEVQYGNF--DVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDAVLTLFVDTC 2302
Query: 252 YTTPSGNPNDDIRYDLFLS-CDKDPQTTVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFL 310
+P N + YDL S C +D + + RF F F F+ + +V+L
Sbjct: 2303 VASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFL----NRFPSVYL 2358
Query: 311 HCVTKLCRA-DDCPFLMPICSHRERRDAG 338
C +CRA D C R +RD G
Sbjct: 2359 RCKMVVCRAYDPSSRCYRGCVLRSKRDVG 2387
>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
[Homo sapiens]
Length = 1785
Score = 48.5 bits (114), Expect = 1e-05
Identities = 61/269 (22%), Positives = 101/269 (37%), Gaps = 34/269 (12%)
Query: 78 GYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGN 137
G+S +DL ++ +G CR I P +VIF I S GCG +
Sbjct: 1517 GFSASDLVISTWNGYYECRPQIT----PNLVIFTIPYS---GCGT------------FKQ 1557
Query: 138 ATSVQVGNISGYIDTPDPPTIISYLPGLLYKFSCSY------PLEYLVNNTQLASSSAAI 191
A + + + S ++ II L SC Y+ N+T +++
Sbjct: 1558 ADNDTI-DYSNFLTAAVSGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVANNTIQ 1616
Query: 192 SVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYC 251
G F +N+ Y S++ + + L ++ + + D + +D C
Sbjct: 1617 VEEVQYGNF--DVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDAVLTLFVDTC 1674
Query: 252 YTTPSGNPNDDIRYDLFLS-CDKDPQTTVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFL 310
+P N + YDL S C +D + + RF F F F+ + +V+L
Sbjct: 1675 VASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFL----NRFPSVYL 1730
Query: 311 HCVTKLCRA-DDCPFLMPICSHRERRDAG 338
C +CRA D C R +RD G
Sbjct: 1731 RCKMVVCRAYDPSSRCYRGCVLRSKRDVG 1759
>gi|4508045 zona pellucida glycoprotein 2 preproprotein [Homo
sapiens]
Length = 745
Score = 45.4 bits (106), Expect = 1e-04
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 21/229 (9%)
Query: 152 TPDPPTIISYLPGLLYKFSCSYPLEYLVNNTQLASSSAAISVRENNGTFVSTLNLLLYND 211
T PP+ IS CSY ++ N + S + ++ G F TL L Y D
Sbjct: 446 TDFPPSKISRDSEFRMTVKCSYSRNDMLLNINVESLTPPVA-SVKLGPF--TLILQSYPD 502
Query: 212 STYNQQLIIPSIGLP--LKTKVFAAVQATNLDG-RWNVLMDYCYTTPSGNPNDDIRYDLF 268
++Y Q L L+ ++ V+ N D +++D C+ T + +P+ ++++
Sbjct: 503 NSYQQPYGENEYPLVRFLRQPIYMEVRVLNRDDPNIKLVLDDCWATSTMDPDSFPQWNVV 562
Query: 269 LS-CDKDP---QTTVIENGRS-----QRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCR- 318
+ C D QTT G S RF + F FV + S V+ HC +C
Sbjct: 563 VDGCAYDLDNYQTTFHPVGSSVTHPDHYQRFDMKAFAFVSEAHVLSSLVYFHCSALICNR 622
Query: 319 -ADDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGPIITRSDET 366
+ D P C R RR T + ++ + L GPI+ SD++
Sbjct: 623 LSPDSPLCSVTCPVSSRH---RRATGATEAEKMTVSL-PGPILLLSDDS 667
>gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens]
Length = 607
Score = 43.5 bits (101), Expect = 4e-04
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 193 VRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGLPLKTKVFAAVQATNLDGRWNVLMDYCY 252
++ N ++ L+ +++ + ++ + L +F V D V +D C
Sbjct: 384 IQSQNALGKYNTSMALFESNSFEKTILESPYYVDLNQTLFVQVSLHTSDPNLVVFLDTCR 443
Query: 253 TTPSGNPNDDIRYDLFLS-CDKDPQTTVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLH 311
+P+ + YDL S C +D +T + GRF F F+F++ MS+V+L
Sbjct: 444 ASPTSDFASPT-YDLIKSGCSRD-ETCKVYPLFGHYGRFQFNAFKFLR----SMSSVYLQ 497
Query: 312 CVTKLCRADDCPFLMPICSHRERRDAG--RRTTWSPQSSSGSAVLSAGPIITRSDETPTN 369
C +C + D H+ R + G R+ S GPI + D + +
Sbjct: 498 CKVLICDSSD---------HQSRCNQGCVSRSKRDISSYKWKTDSIIGPIRLKRDRSASG 548
Query: 370 NS 371
NS
Sbjct: 549 NS 550
>gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo
sapiens]
Length = 540
Score = 42.4 bits (98), Expect = 8e-04
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 203 TLNLLLYNDSTYNQQLII---PSIGLPLKTKVFAAVQATN-LDGRWNVLMDYCYTTPSGN 258
TL L + D Y + P + L L+ ++ V + D +L+ C+ TPS +
Sbjct: 316 TLELQIAKDKNYGSYYGVGDYPVVKL-LRDPIYVEVSILHRTDPYLGLLLQQCWATPSTD 374
Query: 259 PNDDIRYDLFLS----CDKDPQTTVIENGR-------SQRGRFSFEVFRFVKHKNQKMST 307
P ++ + + + QT +I + S RFS F FV +K +
Sbjct: 375 PLSQPQWPILVKGCPYIGDNYQTQLIPVQKALDLPFPSHHQRFSIFTFSFVNPTVEKQAL 434
Query: 308 ---VFLHCVTKLCRADDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGP-IITRS 363
V LHC +C+ + P + C RR R S Q+++ S V S GP I+ ++
Sbjct: 435 RGPVHLHCSVSVCQPAETPSCVVTCPDLSRR---RNFDNSSQNTTAS-VSSKGPMILLQA 490
Query: 364 DETPTNNSQLGSPSMPPFQLNAITSALISGMVILGVTSFSLLLCSLALLHRK 415
+ P ++ P + A +SG +ILG +LL+ LA+ +K
Sbjct: 491 TKDPPEKLRV------PVDSKVLWVAGLSGTLILG----ALLVSYLAVKKQK 532
>gi|4885065 amyloid precursor-like protein 1 isoform 2 precursor
[Homo sapiens]
Length = 650
Score = 33.5 bits (75), Expect = 0.38
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 320 DDCPFLMPICSHRERRDAGRRTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMP 379
DD P +P S + + + +P V ++ P P ++S++ +
Sbjct: 517 DDTPMTLPKGSTEQDAASPEKEKMNPLEQYERKVNASVP-----RGFPFHSSEIQRDELA 571
Query: 380 PFQLNAITSALISGMVILGVTSFSLLLCSLALLHRKGPTSLVLNGI 425
P ++ +SG++I+G SL++ S+ LL RK P + +G+
Sbjct: 572 PAG-TGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGV 616
>gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor
[Homo sapiens]
Length = 651
Score = 32.7 bits (73), Expect = 0.65
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 367 PTNNSQLGSPSMPPFQLNAITSALISGMVILGVTSFSLLLCSLALLHRKGPTSLVLNGI 425
P ++S++ + P ++ +SG++I+G SL++ S+ LL RK P + +G+
Sbjct: 560 PFHSSEIQRDELAPAG-TGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGV 617
>gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 306
Score = 31.6 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Query: 225 LPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKD-----PQTT 278
+P ++VF RW + + C TPS P L C D P
Sbjct: 83 VPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPALALLREGCPADTSVAFPPPP 142
Query: 279 VIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCR 318
G ++ RFSF + S FLHC CR
Sbjct: 143 PPSPGAARPARFSFRL-----RPVFNASVQFLHCQLSRCR 177
>gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 31.6 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Query: 225 LPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKD-----PQTT 278
+P ++VF RW + + C TPS P L C D P
Sbjct: 135 VPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPALALLREGCPADTSVAFPPPP 194
Query: 279 VIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCR 318
G ++ RFSF + S FLHC CR
Sbjct: 195 PPSPGAARPARFSFRL-----RPVFNASVQFLHCQLSRCR 229
>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 31.6 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Query: 225 LPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFL-SCDKD-----PQTT 278
+P ++VF RW + + C TPS P L C D P
Sbjct: 135 VPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPALALLREGCPADTSVAFPPPP 194
Query: 279 VIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCR 318
G ++ RFSF + S FLHC CR
Sbjct: 195 PPSPGAARPARFSFRL-----RPVFNASVQFLHCQLSRCR 229
>gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
Length = 561
Score = 31.2 bits (69), Expect = 1.9
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 340 RTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPFQLNAITSALISGMVILGV 399
+T PQ S +AG +T S TP +NS GS + PF L + + L
Sbjct: 107 KTQNRPQDHSAQQTNTAGSNVTTSS-TPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNT 165
Query: 400 TSFSLL 405
T+FS L
Sbjct: 166 TNFSEL 171
>gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]
Length = 589
Score = 31.2 bits (69), Expect = 1.9
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 340 RTTWSPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPFQLNAITSALISGMVILGV 399
+T PQ S +AG +T S TP +NS GS + PF L + + L
Sbjct: 107 KTQNRPQDHSAQQTNTAGSNVTTSS-TPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNT 165
Query: 400 TSFSLL 405
T+FS L
Sbjct: 166 TNFSEL 171
>gi|50233787 nuclear protein in testis [Homo sapiens]
Length = 1132
Score = 29.6 bits (65), Expect = 5.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 345 PQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPFQLNAI 386
P + SG L+ GP T ++TP + +QLG P P L +
Sbjct: 1068 PVAKSGKRALAGGPAPT--EKTPHSGAQLGVPREKPLALGVV 1107
>gi|38679909 testis expressed sequence 2 [Homo sapiens]
Length = 1134
Score = 28.9 bits (63), Expect = 9.4
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 344 SPQSSSGSAVLSAGPIITRSDETPTNNSQLGSPSMPPFQLNAITSALIS 392
SP SSS + S+ + + S++ +++S L SPS P ++ +++ +S
Sbjct: 135 SPGSSSSGPLASSPSVSSLSEQKTSSSSPLSSPSKSPILSSSASTSTLS 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,931,618
Number of Sequences: 37866
Number of extensions: 745828
Number of successful extensions: 1857
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1822
Number of HSP's gapped (non-prelim): 39
length of query: 431
length of database: 18,247,518
effective HSP length: 105
effective length of query: 326
effective length of database: 14,271,588
effective search space: 4652537688
effective search space used: 4652537688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.