Search of human proteins with 28195394

Search of human proteins with 28195394

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28195394 histone cluster 2, H2ab [Homo sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28195394 histone cluster 2, H2ab [Homo sapiens]                    255   8e-69
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                     241   9e-65
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                  241   2e-64
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                    241   2e-64
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                    240   2e-64
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                     240   2e-64
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                     240   2e-64
gi|15617199 histone cluster 3, H2a [Homo sapiens]                     240   2e-64
gi|4504249 histone cluster 1, H2am [Homo sapiens]                     240   2e-64
gi|4504243 histone cluster 1, H2al [Homo sapiens]                     240   2e-64
gi|24638446 histone cluster 2, H2ac [Homo sapiens]                    239   3e-64
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                    239   4e-64
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                    239   4e-64
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                    239   4e-64
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                    238   8e-64
gi|25092737 histone cluster 1, H2aa [Homo sapiens]                    238   8e-64
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                    238   1e-63
gi|29553970 H2A histone family, member J [Homo sapiens]               236   5e-63
gi|4504253 H2A histone family, member X [Homo sapiens]                231   1e-61
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]      154   2e-38
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]     154   2e-38
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]     154   2e-38
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]     154   2e-38
gi|8923920 H2A histone family, member Y2 [Homo sapiens]               150   2e-37
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      136   4e-33
gi|4504255 H2A histone family, member Z [Homo sapiens]                135   9e-33
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     123   5e-29
gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]          112   8e-26
gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]          112   8e-26
gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]          112   8e-26

>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score =  255 bits (651), Expect = 8e-69
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESHKPGKNK
Sbjct: 121 TESHKPGKNK 130


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score =  241 bits (616), Expect = 9e-65
 Identities = 124/130 (95%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score =  241 bits (614), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score =  241 bits (614), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score =  239 bits (611), Expect = 3e-64
 Identities = 122/125 (97%), Positives = 124/125 (99%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHK 125
           TESHK
Sbjct: 121 TESHK 125


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score =  239 bits (610), Expect = 4e-64
 Identities = 122/130 (93%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score =  239 bits (610), Expect = 4e-64
 Identities = 122/130 (93%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score =  239 bits (610), Expect = 4e-64
 Identities = 122/130 (93%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 121 TESHHKAKGK 130


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score =  238 bits (608), Expect = 8e-64
 Identities = 122/128 (95%), Positives = 124/128 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGK 128
           TESH   K
Sbjct: 121 TESHHKAK 128


>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score =  238 bits (608), Expect = 8e-64
 Identities = 119/124 (95%), Positives = 124/124 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNYAER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLA+RNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESH 124
           TESH
Sbjct: 121 TESH 124


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score =  238 bits (606), Expect = 1e-63
 Identities = 122/128 (95%), Positives = 124/128 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHKPGK 128
           TESH   K
Sbjct: 121 TESHHKTK 128


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score =  236 bits (601), Expect = 5e-63
 Identities = 121/125 (96%), Positives = 122/125 (97%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGK RAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHK 125
           TES K
Sbjct: 121 TESQK 125


>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score =  231 bits (589), Expect = 1e-61
 Identities = 118/123 (95%), Positives = 121/123 (98%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+YAERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES 123
           T +
Sbjct: 121 TSA 123


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  154 bits (389), Expect = 2e-38
 Identities = 79/117 (67%), Positives = 94/117 (80%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LAV NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  154 bits (389), Expect = 2e-38
 Identities = 79/117 (67%), Positives = 94/117 (80%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LAV NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score =  154 bits (389), Expect = 2e-38
 Identities = 79/117 (67%), Positives = 94/117 (80%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LAV NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score =  154 bits (389), Expect = 2e-38
 Identities = 79/117 (67%), Positives = 94/117 (80%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTES 123
           AGNAARDNKK R+ PRH+ LAV NDEELN+LL GVTIA GGVLPNI   LL KK  S
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120


>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score =  150 bits (380), Expect = 2e-37
 Identities = 80/120 (66%), Positives = 91/120 (75%), Gaps = 3/120 (2%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKK RI PRH+ LAV NDEELN+LL GVTIA GGVLP I   LL KK
Sbjct: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  136 bits (343), Expect = 4e-33
 Identities = 75/117 (64%), Positives = 89/117 (76%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLA+R DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  135 bits (340), Expect = 9e-33
 Identities = 74/117 (63%), Positives = 88/117 (75%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+ KA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLA+R DEEL+ L+   TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  123 bits (308), Expect = 5e-29
 Identities = 68/103 (66%), Positives = 79/103 (76%), Gaps = 2/103 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    +  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQG 106
           LELAGNA++D K  RI PRHLQLA+R DEEL+ L+   TIA G
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGG 108


>gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  112 bits (280), Expect = 8e-26
 Identities = 70/130 (53%), Positives = 78/130 (60%), Gaps = 19/130 (14%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 102 TESHLKVKEK 111


>gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  112 bits (280), Expect = 8e-26
 Identities = 70/130 (53%), Positives = 78/130 (60%), Gaps = 19/130 (14%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 102 TESHLKVKEK 111


>gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  112 bits (280), Expect = 8e-26
 Identities = 70/130 (53%), Positives = 78/130 (60%), Gaps = 19/130 (14%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESHKPGKNK 130
           TESH   K K
Sbjct: 102 TESHLKVKEK 111


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.134    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,716,672
Number of Sequences: 37866
Number of extensions: 181883
Number of successful extensions: 433
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 362
Number of HSP's gapped (non-prelim): 61
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.