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Search of human proteins with 28144916
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28144916 lin-37 homolog [Homo sapiens]
(246 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28144916 lin-37 homolog [Homo sapiens] 510 e-145
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 41 0.001
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 41 0.001
gi|145309324 FH2 domain containing 1 [Homo sapiens] 40 0.001
gi|7662354 MON1 homolog B [Homo sapiens] 40 0.001
gi|18079216 CASK interacting protein 1 [Homo sapiens] 39 0.004
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.004
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 39 0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 39 0.005
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 39 0.005
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 39 0.005
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.005
gi|154800453 tastin isoform 1 [Homo sapiens] 39 0.005
gi|9945318 MAX binding protein [Homo sapiens] 38 0.009
gi|46370089 sorting nexin 15 isoform B [Homo sapiens] 38 0.009
gi|22547191 sorting nexin 15 isoform A [Homo sapiens] 38 0.009
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 38 0.009
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 38 0.009
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 38 0.009
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 37 0.016
gi|116256475 zinc finger protein 827 [Homo sapiens] 37 0.016
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 37 0.016
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 37 0.021
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 37 0.021
gi|118344450 cell death inducing protein [Homo sapiens] 37 0.021
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 36 0.027
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 36 0.027
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 36 0.027
gi|55741677 SET domain containing 1A [Homo sapiens] 36 0.027
gi|60460889 Myb protein P42POP [Homo sapiens] 36 0.027
>gi|28144916 lin-37 homolog [Homo sapiens]
Length = 246
Score = 510 bits (1314), Expect = e-145
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MFPVKVKVEKSELEMAKARNQLDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAA 60
MFPVKVKVEKSELEMAKARNQLDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAA
Sbjct: 1 MFPVKVKVEKSELEMAKARNQLDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAA 60
Query: 61 TGKRPSARFPHQRRKKRREMDDGLAEGGPQRSNTYVIKLFDRSVDLAQFSENTPLYPICR 120
TGKRPSARFPHQRRKKRREMDDGLAEGGPQRSNTYVIKLFDRSVDLAQFSENTPLYPICR
Sbjct: 61 TGKRPSARFPHQRRKKRREMDDGLAEGGPQRSNTYVIKLFDRSVDLAQFSENTPLYPICR 120
Query: 121 AWMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRI 180
AWMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRI
Sbjct: 121 AWMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRI 180
Query: 181 PSPLQPEMQGTPDDEPSEPEPSPSTLIYRNMQRWKRIRQRWKEASHRNQLRYSESMKILR 240
PSPLQPEMQGTPDDEPSEPEPSPSTLIYRNMQRWKRIRQRWKEASHRNQLRYSESMKILR
Sbjct: 181 PSPLQPEMQGTPDDEPSEPEPSPSTLIYRNMQRWKRIRQRWKEASHRNQLRYSESMKILR 240
Query: 241 EMYERQ 246
EMYERQ
Sbjct: 241 EMYERQ 246
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 40.8 bits (94), Expect = 0.001
Identities = 63/223 (28%), Positives = 86/223 (38%), Gaps = 45/223 (20%)
Query: 5 KVKVEKSELEMAKARNQLDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAATGKR 64
K KVEKSE + A+ +LD+ L R L E K SD K + G++
Sbjct: 462 KTKVEKSEAKAAELEKKLDSELTA--------RHELQVEMKKMESDFEQKLQDLQ--GEK 511
Query: 65 PSARFPHQRRKKRREMDDGLAEGGPQRSNTYVI--KLFDRSVDLAQFSENTPLYPICRAW 122
+ ++++ E D AE + +L D ++A S P
Sbjct: 512 DALH--SEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVP----- 564
Query: 123 MRNSPSVRERECSPSSPLPPLPEDEEGSEVT------NSKSRDVYKLPPPTPPGPPGDAC 176
PSV R +P P PPLP D G+ + +S + PPP PP PG C
Sbjct: 565 ----PSVPSR--APVPPAPPLPGDS-GTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC 617
Query: 177 RSRIPS-------PLQPEMQG--TPDDEPSEPE----PSPSTL 206
S PS P + G T P PE PSPS+L
Sbjct: 618 ISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSL 660
Score = 27.7 bits (60), Expect = 9.5
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 135 SPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDD 194
S + +PP P EG + + S PP PP P + R P P P G P
Sbjct: 637 SGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLP--GSARIPPPPPPLPGSAGIPPP 694
Query: 195 EPSEP 199
P P
Sbjct: 695 PPPLP 699
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 40.8 bits (94), Expect = 0.001
Identities = 63/223 (28%), Positives = 86/223 (38%), Gaps = 45/223 (20%)
Query: 5 KVKVEKSELEMAKARNQLDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAATGKR 64
K KVEKSE + A+ +LD+ L R L E K SD K + G++
Sbjct: 471 KTKVEKSEAKAAELEKKLDSELTA--------RHELQVEMKKMESDFEQKLQDLQ--GEK 520
Query: 65 PSARFPHQRRKKRREMDDGLAEGGPQRSNTYVI--KLFDRSVDLAQFSENTPLYPICRAW 122
+ ++++ E D AE + +L D ++A S P
Sbjct: 521 DALH--SEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVP----- 573
Query: 123 MRNSPSVRERECSPSSPLPPLPEDEEGSEVT------NSKSRDVYKLPPPTPPGPPGDAC 176
PSV R +P P PPLP D G+ + +S + PPP PP PG C
Sbjct: 574 ----PSVPSR--APVPPAPPLPGDS-GTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC 626
Query: 177 RSRIPS-------PLQPEMQG--TPDDEPSEPE----PSPSTL 206
S PS P + G T P PE PSPS+L
Sbjct: 627 ISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSL 669
Score = 27.7 bits (60), Expect = 9.5
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 135 SPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDD 194
S + +PP P EG + + S PP PP P + R P P P G P
Sbjct: 646 SGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLP--GSARIPPPPPPLPGSAGIPPP 703
Query: 195 EPSEP 199
P P
Sbjct: 704 PPPLP 708
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 143 LPEDEEGSEVTNSKSRDVYKLPPPTPPGPP------------GDACRSRIPSPLQPEMQG 190
L D+E + + + + PPP PP PP + C S P P P + G
Sbjct: 9 LVSDKENGNIATAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPG 68
Query: 191 TPDDEPSEPEPSPSTLI--YRNMQRWKRIRQRWKEASHRNQLR 231
P P P P+T + Y ++ + KR+R + + Q+R
Sbjct: 69 EPPIPPPPPGLPPTTHMNGYSHLGKKKRMRSFFWKTIPEEQVR 111
>gi|7662354 MON1 homolog B [Homo sapiens]
Length = 547
Score = 40.4 bits (93), Expect = 0.001
Identities = 30/74 (40%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 127 PSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGD---ACRSRIPSP 183
PS RE +PP PED EG E T SK +D PP+P PP + SR+ SP
Sbjct: 24 PSEEAREGGGVHAVPPDPED-EGLEETGSKDKD----QPPSPSPPPQSEALSSTSRLWSP 78
Query: 184 LQPEMQGTPDDEPS 197
PE T E S
Sbjct: 79 AAPENSPTCSPESS 92
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 38.9 bits (89), Expect = 0.004
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 123 MRNSPSVRERECSPSSPLPPLPEDEEGSEVTN----SKSRDVYKLPPPTPPGPPGDACRS 178
++ P +ERE P P PPL G+ S+ +LPPP PP P +
Sbjct: 1148 VKRRPKAKEREAGPEPP-PPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLA 1206
Query: 179 RIPSPLQPEMQGTPDDEPSEPEPSPSTLI 207
+P PE + +P++P SP ++
Sbjct: 1207 HLPPLPPPEGEAR---KPAKPPVSPKPVL 1232
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.9 bits (89), Expect = 0.004
Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 27/146 (18%)
Query: 62 GKRPSARFPHQRRKKRREMDDGLAEGGPQRSNTYVIKLFDRSVDLAQFSENTPLYPICRA 121
GK +A QRR+ RR+ ++ G S+ + P R+
Sbjct: 471 GKMAAADSVQQRRQYRRQNQQSSSDSGSSSSS----------------EDERPK----RS 510
Query: 122 WMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPT----PPGPPGDACR 177
++N R R SPS P P + E + R PPPT P P R
Sbjct: 511 HVKNGEVGRRRRHSPSRSASPSPRKRQ-KETSPRGRRRRSPSPPPTRRRRSPSPAPPPRR 569
Query: 178 SRIPSPLQPEMQGTPDDEPSEPEPSP 203
R P+P P + TP P PSP
Sbjct: 570 RRTPTP--PPRRRTPSPPPRRRSPSP 593
Score = 32.3 bits (72), Expect = 0.39
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 27/139 (19%)
Query: 124 RNSPSVRERECSPSSPLPPL------PEDEEGSEVTN---------SKSRDVYKLPPPTP 168
R + S +R SPS P+ PE ++ + + S SR V P P
Sbjct: 702 RGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAA 761
Query: 169 PGPPGDACRSRIPSPLQPEMQGT------PDDEPSEPEPSPSTLIYRNMQRWKRIRQRWK 222
PP PSP+Q + T P + P PSPS + + + +++ K
Sbjct: 762 KKPPAP------PSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKK 815
Query: 223 EASHRNQLRYSESMKILRE 241
+ H+ ++ + K +E
Sbjct: 816 DKKHKKDKKHKKHKKHKKE 834
Score = 30.0 bits (66), Expect = 1.9
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 26/209 (12%)
Query: 6 VKVEKSELEMAKARNQLDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAATGKRP 65
++++K E++ + Q++ ++K D+++ D+E ++ + + S +R
Sbjct: 124 LELKKEEIK----QRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRS----PRRR 175
Query: 66 SARFPHQRRKK---RREMDDGLAEGGPQRSNTYVIKLFDRSVDLA-QFSENTPLYPICRA 121
+R P RR+ RRE + R+ + RS A + E TP P
Sbjct: 176 KSRSPSPRRRSSPVRRERKRSHSRSPRHRTKS-------RSPSPAPEKKEKTPELPEPSV 228
Query: 122 WMRNSPSVRERECSPSS---PLP-PLPEDEEGSEVTNSKSRDVYK--LPPPTPPGPPGDA 175
++ PSV+E + P P P+PE +E S NSK + P
Sbjct: 229 KVKE-PSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSR 287
Query: 176 CRSRIPSPLQPEMQGTPDDEPSEPEPSPS 204
RSR PS +P + P PS
Sbjct: 288 TRSRSPSHTRPRRRHRSRSRSYSPRRRPS 316
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.005
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 114 PLYPICRAWMRNSPSVRERECSPSSPL---PPLPEDEEGSEVTNSKSRDVYKLPPPTPPG 170
P +P R S+R+ S SSP PPLP T S++ D PPP P G
Sbjct: 220 PPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP-------TPSRALDDKPPPPPPPVG 272
Query: 171 PPGDACRSRIPSPLQPEMQGTPDDEPSEPEPSPST 205
R +P P P P PS P PS S+
Sbjct: 273 NRPSIHREAVPPP--PPQNNKP-PVPSTPRPSASS 304
Score = 37.7 bits (86), Expect = 0.009
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 15/90 (16%)
Query: 137 SSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTP-----------PGPPGDACRSRIPSPLQ 185
S PLPP P + V + R LPPP P P P RS + SP
Sbjct: 354 SGPLPPPPSERPPPPVRDPPGRSG-PLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 186 PEMQGTPDDEPS---EPEPSPSTLIYRNMQ 212
P D PS P P PST I Q
Sbjct: 413 GPRPPLPPDRPSAGAPPPPPPSTSIRNGFQ 442
Score = 33.9 bits (76), Expect = 0.13
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 18/79 (22%)
Query: 125 NSPSVRERECSPSSPL---PPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIP 181
N PS+ P P PP+P S + + PPP PP PG P
Sbjct: 273 NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP-------PPPPPPSRPG-------P 318
Query: 182 SPLQPEMQGTPDDEPSEPE 200
PL P G D+ P P+
Sbjct: 319 PPLPPSSSGN-DETPRLPQ 336
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.005
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 114 PLYPICRAWMRNSPSVRERECSPSSPL---PPLPEDEEGSEVTNSKSRDVYKLPPPTPPG 170
P +P R S+R+ S SSP PPLP T S++ D PPP P G
Sbjct: 220 PPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP-------TPSRALDDKPPPPPPPVG 272
Query: 171 PPGDACRSRIPSPLQPEMQGTPDDEPSEPEPSPST 205
R +P P P P PS P PS S+
Sbjct: 273 NRPSIHREAVPPP--PPQNNKP-PVPSTPRPSASS 304
Score = 37.7 bits (86), Expect = 0.009
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 15/90 (16%)
Query: 137 SSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTP-----------PGPPGDACRSRIPSPLQ 185
S PLPP P + V + R LPPP P P P RS + SP
Sbjct: 354 SGPLPPPPSERPPPPVRDPPGRSG-PLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 186 PEMQGTPDDEPS---EPEPSPSTLIYRNMQ 212
P D PS P P PST I Q
Sbjct: 413 GPRPPLPPDRPSAGAPPPPPPSTSIRNGFQ 442
Score = 33.9 bits (76), Expect = 0.13
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 18/79 (22%)
Query: 125 NSPSVRERECSPSSPL---PPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIP 181
N PS+ P P PP+P S + + PPP PP PG P
Sbjct: 273 NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP-------PPPPPPSRPG-------P 318
Query: 182 SPLQPEMQGTPDDEPSEPE 200
PL P G D+ P P+
Sbjct: 319 PPLPPSSSGN-DETPRLPQ 336
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 38.5 bits (88), Expect = 0.005
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 135 SPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGT--- 191
S PLPP P N + R + +PP PP PP C + P P P QGT
Sbjct: 88 SAQGPLPPCPIRPP---FPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPF 144
Query: 192 PDDEPSEPEPSP 203
PS P P P
Sbjct: 145 MMPPPSMPHPPP 156
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 38.5 bits (88), Expect = 0.005
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 135 SPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGT--- 191
S PLPP P N + R + +PP PP PP C + P P P QGT
Sbjct: 88 SAQGPLPPCPIRPP---FPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPF 144
Query: 192 PDDEPSEPEPSP 203
PS P P P
Sbjct: 145 MMPPPSMPHPPP 156
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 38.5 bits (88), Expect = 0.005
Identities = 55/209 (26%), Positives = 79/209 (37%), Gaps = 39/209 (18%)
Query: 22 LDAVLQCLLEKSHMDRERLDEEAGKTPSDTHNKDCSIAATGKRPSARFPHQRRKKRREMD 81
LD +LE + R R + G++ + ++D G RP R R +
Sbjct: 3025 LDRDSTSVLESCGLGRRRQPQGQGESEGSSSDED------GSRPLTRLARLRLE------ 3072
Query: 82 DGLAEG--GPQRSNTYVIKLFDRSVDLAQFS----ENTPLYPICRAWMRNSPSVRERECS 135
AEG G + + V+ + +DLA E TP P+ +P +R
Sbjct: 3073 ---AEGMRGRKSGGSMVVAVIQDDLDLADSGPGGLELTP--PVVSL----TPKLRSTRLR 3123
Query: 136 PSSPLPPL-----PEDEEGSEVTNSKSRDVY-KLPPPTPPGPPGDACRSRI-PSPLQPEM 188
P S +PPL P G+ V S +L PP+P GP G S S + E
Sbjct: 3124 PGSLVPPLETEKLPRKRAGAPVGGSPGLAKRGRLQPPSPLGPEGSVEESEAEASGEEEEG 3183
Query: 189 QGTPDDEPSEPEPSPSTLIYRNMQRWKRI 217
GTP P P L+ Q +RI
Sbjct: 3184 DGTP-----RRRPGPRRLVGTTNQGDQRI 3207
Score = 30.4 bits (67), Expect = 1.5
Identities = 24/94 (25%), Positives = 32/94 (34%), Gaps = 6/94 (6%)
Query: 113 TPLYPICRAWMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPP 172
TPL P+ +P SP+ PL PLP + +P P P
Sbjct: 1585 TPLAPMA------APQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTP 1638
Query: 173 GDACRSRIPSPLQPEMQGTPDDEPSEPEPSPSTL 206
G + S P P + + P P PS L
Sbjct: 1639 GTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPL 1672
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 38.5 bits (88), Expect = 0.005
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 24/116 (20%)
Query: 110 SENTPLYPICRAWMRNSPSVRERECSPSSPLPPL-PEDEEG-----SEVTNSKSRDVYKL 163
+E PL CR+ S R+ + P PP P E E+ S ++ ++
Sbjct: 551 AEPRPLESCCRSEPEIPESSRQEQLEVPEPCPPAEPRPLESYCRIEPEIPESSRQEQLEV 610
Query: 164 PPPTPPGPPGDACRSRIPSPLQPEMQGTPDDEPSEPEP-------SPSTLIYRNMQ 212
P P PP PG PLQP QG P P P P TL +R+++
Sbjct: 611 PEPCPPAEPG---------PLQPSTQG--QSGPPGPCPRVELGASEPCTLEHRSLE 655
Score = 37.7 bits (86), Expect = 0.009
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 134 CSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPP---GDACRS--RIPSPLQPEM 188
C P+ P PP E+ ++ ++P P PP P CRS IP + E
Sbjct: 515 CPPAEPGPPEAFCRSEPEIPEPSLQEQLEVPEPYPPAEPRPLESCCRSEPEIPESSRQEQ 574
Query: 189 QGTPDD-EPSEPEPSPSTLIYRNMQRWKRIRQRWKEASHRNQLRYSE 234
P+ P+EP P ++ + RI E+S + QL E
Sbjct: 575 LEVPEPCPPAEPRP---------LESYCRIEPEIPESSRQEQLEVPE 612
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 37.7 bits (86), Expect = 0.009
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 117 PICRAWMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDAC 176
P+ M P P +P PPL + +T V P P PP PP A
Sbjct: 54 PVEEPRMEAPPLPLSPPAPPPAPPPPLATP---APLTVIPIPVVTNSPQPLPPPPPLPAA 110
Query: 177 RSRIP-SPLQPEMQGTPDDEPSEPEPSPS 204
+P +P QP + G P EP P PS
Sbjct: 111 AQPLPLAPRQPALVGAPGLSIKEPAPLPS 139
Score = 29.3 bits (64), Expect = 3.3
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 138 SPLPPLPEDEEGS------EVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSP 183
+PLPP P S + + + K P P PP PP ++ +P+P
Sbjct: 376 APLPPHPHPHPHSVALPPAHLPVQQQQPQQKTPLPAPPPPPAAPAQTLVPAP 427
>gi|46370089 sorting nexin 15 isoform B [Homo sapiens]
Length = 256
Score = 37.7 bits (86), Expect = 0.009
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 111 ENTPLYPICRAWMRNSPSVRERECSPSSPL-------------PPLPEDEEGSEVTN--S 155
E P +P + + R SV E + L P L E G EVT
Sbjct: 74 EEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVTRPLE 133
Query: 156 KSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDDE-PSEPEPS 202
SRD++ LPPP P PP D R+ L E +G + E P +P PS
Sbjct: 134 VSRDLHILPPPLIPTPPPD--DPRLSQLLPAERRGLEELEVPVDPPPS 179
>gi|22547191 sorting nexin 15 isoform A [Homo sapiens]
Length = 342
Score = 37.7 bits (86), Expect = 0.009
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 111 ENTPLYPICRAWMRNSPSVRERECSPSSPL-------------PPLPEDEEGSEVTN--S 155
E P +P + + R SV E + L P L E G EVT
Sbjct: 74 EEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVTRPLE 133
Query: 156 KSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDDE-PSEPEPS 202
SRD++ LPPP P PP D R+ L E +G + E P +P PS
Sbjct: 134 VSRDLHILPPPLIPTPPPD--DPRLSQLLPAERRGLEELEVPVDPPPS 179
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 37.7 bits (86), Expect = 0.009
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 16/95 (16%)
Query: 120 RAWMRNSPSVRERECSPSSPL--PPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACR 177
+ W R +PS SP P LP+ +V +SR + + P PP PP
Sbjct: 378 KVWQRGTPSSSPYVSPRHSPWSSPKLPK-----KVQTVRSRPLSPVATPPPPPPP----- 427
Query: 178 SRIPSPLQPEMQGTPDDEPSEPEPSP-STLIYRNM 211
P P P Q P P P P P LI RN+
Sbjct: 428 ---PPPPPPSSQRLPPPPPPPPPPLPEKKLITRNI 459
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 37.7 bits (86), Expect = 0.009
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 139 PLPPLPEDEEGSEVTNSKSRDVY-KLPPPTPPGPPGD-------ACRSRIPSPLQPEMQG 190
P PP PE+++ S + + + P P GP G A S + LQ + G
Sbjct: 772 PPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPG 831
Query: 191 TPDDEPSEPEPSPST 205
+PD P+ P P+P++
Sbjct: 832 SPDPPPAPPAPAPAS 846
Score = 30.0 bits (66), Expect = 1.9
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 135 SPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPT--PPGPPGDACRSRIPSPLQPEMQGTP 192
+P + L PL E SK + PPP+ PP PP + +P E P
Sbjct: 709 TPQTTLTPLQESP-----VISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEP 763
Query: 193 DDEPSEPEPSP 203
+P+ P P P
Sbjct: 764 LQDPNWPPPPP 774
Score = 28.1 bits (61), Expect = 7.3
Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 127 PSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPG----PPGDACRSRIPS 182
P ER+ P P PP EG+ P PG PP R+ PS
Sbjct: 522 PPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPS 581
Query: 183 PLQPEMQGTPDDEP---SEPEPSP 203
GTP P + P SP
Sbjct: 582 SGYSSQSGTPTLPPKGLAGPPASP 605
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.7 bits (86), Expect = 0.009
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 164 PPPTPPGPPGDACRSRIPSPLQPEMQGTPDDEPSEPEPSPS 204
PPP PP PP +P P+QPE + P E + PS
Sbjct: 1060 PPPPPPQPPAPIQPQSVPPPIQPEAEKFPSTETATLAQKPS 1100
Score = 30.8 bits (68), Expect = 1.1
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 13/66 (19%)
Query: 145 EDEEGSEVTNS-----KSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDDEPSEP 199
E E+ +VT + + LPPP PP P P+P+QP+ P +E
Sbjct: 1035 EGEKAEKVTEKVVVKPEKTEKKDLPPPPPPPQP--------PAPIQPQSVPPPIQPEAEK 1086
Query: 200 EPSPST 205
PS T
Sbjct: 1087 FPSTET 1092
Score = 29.3 bits (64), Expect = 3.3
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 125 NSPSVRERECSPSSPL---PPLPEDEEGSEVTNSKSRDVYKLPPPTP-----PGPPGDA- 175
++P+ SP++P+ P +P + V + + P PTP P PP A
Sbjct: 1872 SAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVSAPNPAPPAPAQ 1931
Query: 176 ----CRSRIPSPLQPEMQGTPDDEPSEPEPSPST 205
+ +PLQ Q + PS PS T
Sbjct: 1932 TQAQTHKPVQNPLQTTSQSSKQPPPSIRLPSAQT 1965
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 37.0 bits (84), Expect = 0.016
Identities = 42/133 (31%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Query: 68 RFPHQRRKKRREMDDGLAE----GGPQRSNTYVI-KLFDRSVDLAQFSENTPLYPICRAW 122
R P ++ R GLAE GPQ T V +A+ E R
Sbjct: 58 RTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR------RTS 111
Query: 123 MRNSPSVRERECSPSSPLPPLPEDEEGSEVT-NSKSRDVYKLPPPTPPGPPGDACRSRIP 181
R V RE S L L EDE SE N+K+ KLPPP P PP + S P
Sbjct: 112 RRKRAKVEYREMDES--LANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESE-P 168
Query: 182 SPLQPEMQGTPDD 194
+ G DD
Sbjct: 169 EEPSGQAGGLQDD 181
>gi|116256475 zinc finger protein 827 [Homo sapiens]
Length = 1077
Score = 37.0 bits (84), Expect = 0.016
Identities = 45/206 (21%), Positives = 74/206 (35%), Gaps = 38/206 (18%)
Query: 21 QLDAVLQCLLEKSHMDR--ERLDEEAGKTPSDTHNKDCSIAATGKRPSARFPHQRRKKRR 78
+L A +L+ + R E + E+ +P + + ++AA K+ S R
Sbjct: 214 KLKAAANAVLQDKSLTRTEETMRFESFSSPFSSQSASSTLAALSKKVS----------ER 263
Query: 79 EMDDGLAEGGPQRSNTYVIKLFDRSVDLAQFSENTPLYPICRAWMRNSPSVRERECSPSS 138
+ G P S + LA + + L A S + P
Sbjct: 264 SLTPGQEHPPPASS----------FLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPED 313
Query: 139 PLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRS----RIPSP---LQPEMQGT 191
PLPP P +++ +VT PPP PP PP +S +P P +
Sbjct: 314 PLPPPPSEKKPEKVTPP--------PPPPPPPPPPPPPQSLELLLLPVPKGRVSKPSNSA 365
Query: 192 PDDEPSEPEPSP-STLIYRNMQRWKR 216
++E +P P L+ + WKR
Sbjct: 366 SEEESGKPFQCPICGLVIKRKSYWKR 391
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 37.0 bits (84), Expect = 0.016
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 136 PSSPLPPLPEDEE-------GSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEM 188
P+ P P PE EE G++ + + RD PP PP PP R +P P P
Sbjct: 10 PTHPAEPPPEAEEPEADARPGAKAPSRRRRDCR---PPPPPPPPAGPSRGPLPPPPPPRG 66
Query: 189 QGTP 192
G P
Sbjct: 67 LGPP 70
Score = 32.0 bits (71), Expect = 0.51
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 15/50 (30%)
Query: 126 SPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPP---GPP 172
+PS R R+C P P PP G LPPP PP GPP
Sbjct: 33 APSRRRRDCRPPPPPPPPAGPSRG------------PLPPPPPPRGLGPP 70
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 36.6 bits (83), Expect = 0.021
Identities = 39/122 (31%), Positives = 46/122 (37%), Gaps = 14/122 (11%)
Query: 68 RFPHQRRKKRREMDDGLAE----GGPQRSNTYVI-KLFDRSVDLAQFSENTPLYPICRAW 122
R P ++ R GLAE GPQ T V +A+ E R
Sbjct: 58 RTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR------RTS 111
Query: 123 MRNSPSVRERECSPSSPLPPLPEDEEGSEVT-NSKSRDVYKLPPPTPPGPPGDACRSRIP 181
R V RE S L L EDE SE N+K+ KLPPP P PP + S
Sbjct: 112 RRKRAKVEYREMDES--LANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPE 169
Query: 182 SP 183
P
Sbjct: 170 EP 171
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 36.6 bits (83), Expect = 0.021
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 150 SEVTNSKSRDVYKLPPPTPPGPPGDAC--RSRIPSPLQPEMQGTPDDEPSEPEPSP 203
S++ + +SR V++ PPP PP P GDA + R P+ QP P+ P P P
Sbjct: 241 SKLVSKRSR-VFQPPPPPPPAPSGDAPAEKERCPAGQQPPQHRV---APARPPPKP 292
>gi|118344450 cell death inducing protein [Homo sapiens]
Length = 208
Score = 36.6 bits (83), Expect = 0.021
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 136 PSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDDE 195
P P PL E++ G+ T +S PPP P PP D P P +P
Sbjct: 10 PGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIG----PPPYEP--------- 56
Query: 196 PSEPEPSP 203
P P P P
Sbjct: 57 PGHPMPQP 64
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 36.2 bits (82), Expect = 0.027
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 112 NTPLYPICRAWMRNSPSVRERECSPSSPLPP----LPEDEEGSEVTNSKSRDVYKLPPPT 167
N P+CRA R +P S L P P +GS + + +Y PPP
Sbjct: 104 NAVACPVCRAPTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP 163
Query: 168 PPGPPGDACRSRIPSPLQPEMQGTP 192
PPGP ++R P P P G P
Sbjct: 164 PPGPR----KARAPPPPPPLRLGRP 184
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 36.2 bits (82), Expect = 0.027
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 112 NTPLYPICRAWMRNSPSVRERECSPSSPLPP----LPEDEEGSEVTNSKSRDVYKLPPPT 167
N P+CRA R +P S L P P +GS + + +Y PPP
Sbjct: 104 NAVACPVCRAPTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP 163
Query: 168 PPGPPGDACRSRIPSPLQPEMQGTP 192
PPGP ++R P P P G P
Sbjct: 164 PPGPR----KARAPPPPPPLRLGRP 184
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 36.2 bits (82), Expect = 0.027
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 112 NTPLYPICRAWMRNSPSVRERECSPSSPLPP----LPEDEEGSEVTNSKSRDVYKLPPPT 167
N P+CRA R +P S L P P +GS + + +Y PPP
Sbjct: 104 NAVACPVCRAPTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP 163
Query: 168 PPGPPGDACRSRIPSPLQPEMQGTP 192
PPGP ++R P P P G P
Sbjct: 164 PPGPR----KARAPPPPPPLRLGRP 184
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 36.2 bits (82), Expect = 0.027
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 126 SPSVRERECSPSSPLP---PLPEDEEGSEVTNSKSRDVYKLPP--PTPPGPPGDACRSRI 180
S S RE +P P P+PE GS VT ++ P PT PP R
Sbjct: 1076 SASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAGPTEESPPSAPLRPPE 1135
Query: 181 PSPLQPEMQGTPDDEPSEPEP 201
P P PD+ PS P P
Sbjct: 1136 PPAGPPAPAPRPDERPSSPIP 1156
Score = 32.0 bits (71), Expect = 0.51
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 126 SPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSP 183
+P+ R E PSSP+P LP ++ + + + +V P P P PP +++ P P
Sbjct: 1142 APAPRPDE-RPSSPIPLLPPPKKRRKTVSFSAIEVVPAPEPPPATPP----QAKFPGP 1194
Score = 28.9 bits (63), Expect = 4.3
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 124 RNSPSVR-ERECSPSSPLPPLP--EDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRS-- 178
R SP + + SP S + +D+ G + + PPP PP PP S
Sbjct: 563 RESPKANGQNQASPCSSGDDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPYLASLP 622
Query: 179 -----RIPSPLQPEMQGTPDDEPSEPEPSPSTLIY---RNMQRWKRIRQRW 221
P+ L P P P P P IY +++ R+ +W
Sbjct: 623 LGYPPHQPAYLLPPRPDGPPPPEYPPPPPPPPHIYDFVNSLELMDRLGAQW 673
Score = 28.5 bits (62), Expect = 5.6
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 135 SPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDD 194
S +S LPP P + S + PPP PP PG PSP + E++ +P
Sbjct: 408 SYTSYLPPEPSRPTDQDYRPPAS----EAPPPEPP-EPGGGGGGGGPSPEREEVRTSP-- 460
Query: 195 EPSEP----EPSPST 205
P+ P P+P T
Sbjct: 461 RPASPARSGSPAPET 475
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 36.2 bits (82), Expect = 0.027
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 11/86 (12%)
Query: 117 PICRAWMRNSPSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGDAC 176
P C P +ERE P S L P+ R PPP PP PP
Sbjct: 185 PSCTPQEGGCPRPKERESPPPSALQPV-----------QLPRLALSPPPPAPPLPPPPPL 233
Query: 177 RSRIPSPLQPEMQGTPDDEPSEPEPS 202
PSP P P S +PS
Sbjct: 234 AQVAPSPPSPPPPPRPPPTLSASDPS 259
Score = 28.5 bits (62), Expect = 5.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 160 VYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPD 193
V LPPP PP PP + P P+++ TP+
Sbjct: 303 VDSLPPPLPPPPPPPPPPRPVLPPPAPKVEITPE 336
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,958,158
Number of Sequences: 37866
Number of extensions: 887273
Number of successful extensions: 8845
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 576
Number of HSP's that attempted gapping in prelim test: 5666
Number of HSP's gapped (non-prelim): 2989
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.