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Search of human proteins with 27734961
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27734961 hypothetical protein LOC160298 [Homo sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27734961 hypothetical protein LOC160298 [Homo sapiens] 689 0.0
gi|146134388 YLP motif containing 1 [Homo sapiens] 47 3e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 46 5e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 43 3e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 43 3e-04
gi|52485606 formin-like 2 [Homo sapiens] 42 6e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 42 6e-04
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 42 0.001
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 42 0.001
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 42 0.001
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 42 0.001
gi|47132519 Ras association and pleckstrin homology domains 1 is... 42 0.001
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 40 0.002
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 40 0.002
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 40 0.002
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 0.002
gi|157168329 formin 1 [Homo sapiens] 40 0.004
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 40 0.004
gi|11386183 WAS protein family, member 2 [Homo sapiens] 39 0.005
gi|122937223 NOBOX oogenesis homeobox [Homo sapiens] 39 0.005
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 39 0.005
gi|11415052 retinoid X receptor, beta [Homo sapiens] 39 0.006
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.008
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.008
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 39 0.008
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 39 0.008
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 39 0.008
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 39 0.008
gi|31652264 RNA binding motif protein 26 [Homo sapiens] 39 0.008
gi|19913398 smoothelin isoform a [Homo sapiens] 39 0.008
>gi|27734961 hypothetical protein LOC160298 [Homo sapiens]
Length = 333
Score = 689 bits (1779), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MLVGTPNLLTLDEADATWTLIKDKVIEEHFGPNAVAVPFLSDAACYDLLGVLVKQSRPAH 60
MLVGTPNLLTLDEADATWTLIKDKVIEEHFGPNAVAVPFLSDAACYDLLGVLVKQSRPAH
Sbjct: 1 MLVGTPNLLTLDEADATWTLIKDKVIEEHFGPNAVAVPFLSDAACYDLLGVLVKQSRPAH 60
Query: 61 TRLALPGRQGRRALKPVGPLPSLLEQAGSEGAFAHCTREYSPNGRAERAYEETRMLDGQP 120
TRLALPGRQGRRALKPVGPLPSLLEQAGSEGAFAHCTREYSPNGRAERAYEETRMLDGQP
Sbjct: 61 TRLALPGRQGRRALKPVGPLPSLLEQAGSEGAFAHCTREYSPNGRAERAYEETRMLDGQP 120
Query: 121 CKIRLHMGDLRKKVAFLLLPPGQVSLQQTLPWLRSTHSIYVIYQVFSCSWLQLGLTSTAR 180
CKIRLHMGDLRKKVAFLLLPPGQVSLQQTLPWLRSTHSIYVIYQVFSCSWLQLGLTSTAR
Sbjct: 121 CKIRLHMGDLRKKVAFLLLPPGQVSLQQTLPWLRSTHSIYVIYQVFSCSWLQLGLTSTAR 180
Query: 181 EPQLLRLLRSLPVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTS 240
EPQLLRLLRSLPVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTS
Sbjct: 181 EPQLLRLLRSLPVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTS 240
Query: 241 ASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSP 300
ASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSP
Sbjct: 241 ASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSP 300
Query: 301 PPGAQGGGPRDPDGHSMSLPLLQGLSSEFDSDD 333
PPGAQGGGPRDPDGHSMSLPLLQGLSSEFDSDD
Sbjct: 301 PPGAQGGGPRDPDGHSMSLPLLQGLSSEFDSDD 333
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 46.6 bits (109), Expect = 3e-05
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 211 QKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDK 270
+ P P+P G+ ++ P+ S MPP P + PP P PP Q P
Sbjct: 144 ESPPESPPVPPGS-YMPPSQSYMPPPQPPPSY--------YPPTSSQPYLPPAQPSPSQS 194
Query: 271 PTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMS 318
P SY P + S+++L +S P +Q R GHS S
Sbjct: 195 PPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKS 242
Score = 33.9 bits (76), Expect = 0.21
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 216 KDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
+ P P G +P SI+ P AP + S+ VP P P PP P P P KP
Sbjct: 1513 RPPPPMG----KPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKP 1564
Score = 30.8 bits (68), Expect = 1.8
Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 229 NLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQI 288
N+S+ PP P S +PPPV P PPP P P G P P +
Sbjct: 513 NMSMPPPFVPYSQMPPPLPT--MPPPVLPPSLPPPVM-PPALPATVPPPGMPPPVMPPSL 569
Query: 289 LSENWLFSPRSPPPGAQGGGP 309
+ P PP GP
Sbjct: 570 PTS---VPPPGMPPSLSSAGP 587
Score = 29.6 bits (65), Expect = 3.9
Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 5/81 (6%)
Query: 232 IMPPLAPTSASADTTEAADVPPPVPA---PPTPPPQEGPEDKPTRFSYKGRNPFWRGPQI 288
++PP P A PP +P PP+ P P P S G P P +
Sbjct: 537 VLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSL 596
Query: 289 LSENWLFSPRSPPPGAQGGGP 309
S P PPP P
Sbjct: 597 SSAG--PPPVLPPPSLSSTAP 615
Score = 28.5 bits (62), Expect = 8.7
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 234 PPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENW 293
PPL P PPP P PP P P + K ++ ++ + GP L
Sbjct: 84 PPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQ-KQQQYKHQMLHHQRDGPPGLVPME 142
Query: 294 LFSPRSPPPGAQG 306
L SP PP G
Sbjct: 143 LESPPESPPVPPG 155
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 45.8 bits (107), Expect = 5e-05
Identities = 37/120 (30%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
P KP + P P G N +P PP P PPP P PPPQ G +
Sbjct: 301 PGKP--QGPPPQGGN--QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 356
Query: 270 KPTRF---------SYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLP 320
+ R +G NP +GP + P++PP G G PR P G S P
Sbjct: 357 RSARSPPGKPQGPPQQEGNNP--QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
P KP + P P G N R + S PP P PPP P P PP +G +
Sbjct: 156 PGKP--QGPPPQGDNKSRSSRS--PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GN 210
Query: 270 KPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-----PGAQGG----GPRDPDGHSMSLP 320
KP G+ +GP +N S RSPP P QGG GP P G P
Sbjct: 211 KPQGPPPPGKP---QGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 267
Score = 38.9 bits (89), Expect = 0.006
Identities = 34/116 (29%), Positives = 42/116 (36%), Gaps = 9/116 (7%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEG--- 266
P KP + P P G N + + PP P PPP P P PP +G
Sbjct: 218 PGKP--QGPPPQGDN--KSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 273
Query: 267 PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPP--GAQGGGPRDPDGHSMSLP 320
P+ P +G P S + P+ PPP G Q GP P G P
Sbjct: 274 PQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 329
Score = 37.4 bits (85), Expect = 0.019
Identities = 34/116 (29%), Positives = 40/116 (34%), Gaps = 10/116 (8%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEG--- 266
P KP + P P G P PP P PPP P P PP +G
Sbjct: 95 PGKP--QGPPPQGDKSRSPR---SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 149
Query: 267 PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPP--GAQGGGPRDPDGHSMSLP 320
P+ P +G P S + P+ PPP G Q GP P G P
Sbjct: 150 PQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 205
Score = 34.7 bits (78), Expect = 0.12
Identities = 36/116 (31%), Positives = 39/116 (33%), Gaps = 25/116 (21%)
Query: 209 GPQKPLTKD--PLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEG 266
GP P K P P G N +P PP P PPP P PPPQ
Sbjct: 49 GPPSPPGKPQGPPPQGGN--QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ-- 104
Query: 267 PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPP--GAQGGGPRDPDGHSMSLP 320
K R+P R P P+ PPP G Q GP P G P
Sbjct: 105 --------GDKSRSP--RSPP-------GKPQGPPPQGGNQPQGPPPPPGKPQGPP 143
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 43.1 bits (100), Expect = 3e-04
Identities = 36/113 (31%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 208 LGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGP 267
L P P PLP P+ S PPL P + PPP+P+PP PP QE
Sbjct: 406 LTPPAPSPPPPLPP------PSTSPPPPLCPPPPPPVS------PPPLPSPPPPPAQEEQ 453
Query: 268 EDKP------TRFSYKGRNPFWRGPQILSENWL-----FSPRSPPPGAQGGGP 309
E+ P T +GR P + E SP +P P GGP
Sbjct: 454 EESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGP 506
Score = 39.3 bits (90), Expect = 0.005
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 211 QKPLTKDPLPHGANWVRPNLSIMPPL---APTS-ASADTTEAADVPPPVPAPPTPPPQE- 265
++P P P + W P L P L PTS +A T + ++ PP PAP PPP++
Sbjct: 1914 RRPSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPPGPAPSPPPPEDL 1973
Query: 266 GPE 268
GP+
Sbjct: 1974 GPD 1976
Score = 35.4 bits (80), Expect = 0.072
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
P P P + RP L P P+ A E+ PPP+ AP P P+ P D
Sbjct: 626 PPPPAPSPPPAPATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPEPPPAD 685
Score = 33.5 bits (75), Expect = 0.27
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 34/127 (26%)
Query: 213 PLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPV----PAPPTPPP----- 263
P+ + PLP P +S P APTS + V P V PAPP PPP
Sbjct: 2214 PVKQPPLP-------PTIS---PTAPTSWTLPPGPLLGVLPVVGVVRPAPPPPPPPLTLV 2263
Query: 264 -QEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPR-DPDGH-SMSLP 320
GP P R + FS RSPP PR D DG S P
Sbjct: 2264 LSSGPASPP------------RQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGEASEDTP 2311
Query: 321 LLQGLSS 327
+ GL S
Sbjct: 2312 QVPGLGS 2318
Score = 32.7 bits (73), Expect = 0.46
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 228 PNLSIMPPLAPTSASADTTEAADVPPPVPAPP-TPPPQEGPEDKPTRFSYKGRNPFWRGP 286
P + + P L P + + P PVP+PP P P P P + R P +R
Sbjct: 555 PKVEVSPVLRPPITT--SPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWT 612
Query: 287 QILSENWLFSPRSPPPGAQGGGP 309
+ E P PPP A P
Sbjct: 613 SLTRELPPPPPAPPPPPAPSPPP 635
Score = 32.7 bits (73), Expect = 0.46
Identities = 38/109 (34%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
P P T PLP R ++ P TS + + +PPP PAPP PPP P
Sbjct: 587 PTPPSTPVPLPEK----RRSILREPTFRWTSLTRE------LPPPPPAPP-PPPAPSPPP 635
Query: 270 KPTRFSYKGRNP-FWRGPQIL-SENWL---FSPRSPPPGAQGGGPRDPD 313
P S R P R PQ SE L S +PPP G P P+
Sbjct: 636 APATSS---RRPLLLRAPQFTPSEAHLKIYESVLTPPP---LGAPEAPE 678
Score = 31.2 bits (69), Expect = 1.3
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 234 PPLAPTSASADTTEAADVPPPVPAPPTPPPQEG----PEDKPT 272
PPL P+ + EAA P +PPTP P PED PT
Sbjct: 472 PPLTPSQRAE--REAARAGPEGTSPPTPTPSTATGGPPEDSPT 512
Score = 30.8 bits (68), Expect = 1.8
Identities = 38/154 (24%), Positives = 54/154 (35%), Gaps = 31/154 (20%)
Query: 207 VLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPP-----------PV 255
VL P P P+ + +RP+ PP AP S S + + P P+
Sbjct: 1826 VLVPGAPERHSPIQNLDPPLRPDSGSAPPPAPRSFSGARIKVPNYSPSRRPLGGVSFGPL 1885
Query: 256 PAPPTPP------PQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSP-------RSPPP 302
P+P +P P G D P + R P P+ W P R PPP
Sbjct: 1886 PSPGSPSSLTHHIPTVGDPDFPAP-PRRSRRPSPLAPRPPPSRWASPPLKTSPQLRVPPP 1944
Query: 303 GA------QGGGPRDPDGHSMSLPLLQGLSSEFD 330
+ G P G + S P + L +F+
Sbjct: 1945 TSVVTALTPTSGELAPPGPAPSPPPPEDLGPDFE 1978
Score = 28.5 bits (62), Expect = 8.7
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
Query: 242 SADTTEAADVPPPV--PAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRS 299
+A+ EA PPP+ PAP PPP P P P P + P
Sbjct: 393 AAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPL--------PSP 444
Query: 300 PPPGAQ 305
PPP AQ
Sbjct: 445 PPPPAQ 450
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 43.1 bits (100), Expect = 3e-04
Identities = 37/109 (33%), Positives = 44/109 (40%), Gaps = 13/109 (11%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVP---PPVPAPPT-PPPQE 265
P KP + P P G N S PP P ++ + P PP P P PPPQE
Sbjct: 201 PGKP--EGPPPQGGNQ-----SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQE 253
Query: 266 G--PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDP 312
G P+ P +G P PQ P+ PPP QGG P P
Sbjct: 254 GNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRP 302
Score = 34.7 bits (78), Expect = 0.12
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 16/109 (14%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV---PPPVPAPPTPPPQEG 266
P KP + P P G N S PP P + + PPP P P PP +G
Sbjct: 180 PGKP--EGPPPQGGNQ-----SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQG 232
Query: 267 PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGH 315
+ G+ +GP N P+ PPP + GP P G+
Sbjct: 233 GNKPQGPPPHPGKP---QGPPPQEGN---KPQRPPPPGRPQGPPPPGGN 275
Score = 32.3 bits (72), Expect = 0.61
Identities = 32/124 (25%), Positives = 42/124 (33%), Gaps = 26/124 (20%)
Query: 220 PHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEG------------- 266
P G N +P + PP P + PPP P P PP +G
Sbjct: 41 PQGGN--QPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK 98
Query: 267 PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPP--GAQGGGPRDPDGHSMSLPLLQG 324
PE +P + + + P R + P PPP G Q GP G P G
Sbjct: 99 PEGQPPQGGNQSQGPPPRPGK---------PEGPPPQGGNQSQGPPPRPGKPEGPPPQGG 149
Query: 325 LSSE 328
S+
Sbjct: 150 NQSQ 153
Score = 28.9 bits (63), Expect = 6.7
Identities = 35/133 (26%), Positives = 46/133 (34%), Gaps = 32/133 (24%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV---PPPVPAPPTPPPQEG 266
P KP + P P G N S PP P + + PPP P P PP +G
Sbjct: 138 PGKP--EGPPPQGGNQ-----SQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG 190
Query: 267 -------------PEDKPTRFSYKGRNPFWR-----GPQILSENWLFSPRSPPP-GAQGG 307
PE P + + + P R GP N P+ PPP +
Sbjct: 191 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGN---KPQGPPPHPGKPQ 247
Query: 308 GPRDPDGHSMSLP 320
GP +G+ P
Sbjct: 248 GPPPQEGNKPQRP 260
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 42.4 bits (98), Expect = 6e-04
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 234 PPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
PPL P+S + +T + V PP+P PP PPP P P
Sbjct: 531 PPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPP 568
Score = 32.3 bits (72), Expect = 0.61
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 234 PPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
PP P S+DT E P P P PPP P P
Sbjct: 528 PPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPP 565
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 42.4 bits (98), Expect = 6e-04
Identities = 36/120 (30%), Positives = 45/120 (37%), Gaps = 15/120 (12%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
P KP + P P G N +P PP P PPP P PP Q G +
Sbjct: 216 PGKP--QGPPPQGGN--QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKS 271
Query: 270 KPTRF---------SYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLP 320
+ R +G NP +GP + P++PP G G PR P G S P
Sbjct: 272 QSARSPPGKPQGPPQQEGNNP--QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 329
Score = 35.0 bits (79), Expect = 0.093
Identities = 38/123 (30%), Positives = 44/123 (35%), Gaps = 25/123 (20%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEG--- 266
P KP + P P G P PP P PPP P P PP +G
Sbjct: 74 PGKP--QGPPPQGDKSRSPR---SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNR 128
Query: 267 PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-----PGAQGG----GPRDPDGHSM 317
P+ P +G P +G + SPRSPP P QGG GP P G
Sbjct: 129 PQGPPPPGKPQGPPP--QGDKSR------SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 180
Query: 318 SLP 320
P
Sbjct: 181 GPP 183
Score = 35.0 bits (79), Expect = 0.093
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPT-PPPQEGPE 268
P KP + P P G P PP P PPP P P PPPQ G +
Sbjct: 135 PGKP--QGPPPQGDKSRSPR---SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKK 189
Query: 269 DKPTRFSYKGRNPFWRGPQI-LSENWLFSPRSPPP--GAQGGGPRDPDGHSMSLP 320
+ K + P +G + S++ P+ PPP G Q GP P G P
Sbjct: 190 PQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 244
Score = 33.5 bits (75), Expect = 0.27
Identities = 32/105 (30%), Positives = 35/105 (33%), Gaps = 23/105 (21%)
Query: 218 PLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYK 277
P P G N +P PP P PPP P PPPQ K
Sbjct: 39 PSPQGGN--KPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ----------GDK 86
Query: 278 GRNPFWRGPQILSENWLFSPRSPPP--GAQGGGPRDPDGHSMSLP 320
R+P R P P+ PPP G Q GP P G P
Sbjct: 87 SRSP--RSPP-------GKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
Score = 33.1 bits (74), Expect = 0.36
Identities = 39/130 (30%), Positives = 47/130 (36%), Gaps = 23/130 (17%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQ----- 264
P KP + P P G N +P PP P + PPP P PPPQ
Sbjct: 155 PGKP--QGPPPQGGN--QPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSR 210
Query: 265 --EGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGG----GPRDPDGHSMS 318
+ P KP +G N P + P+ PPP QGG GP P G
Sbjct: 211 SSQSPPGKPQGPPPQGGNQPQGPPPPPGK-----PQGPPP--QGGNKPQGP-PPPGKPQG 262
Query: 319 LPLLQGLSSE 328
P G S+
Sbjct: 263 PPAQGGSKSQ 272
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPH--GANWVRPNLSIMPPLAPTS-ASADTTEA 248
P +FS + SL S G LGP+ P + H G + ++ S PL ++ S+D
Sbjct: 320 PPSFSPVVDSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLP 379
Query: 249 ADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGP--------QILSENWLFSPRSP 300
D P +P PP PPP P G P P +L E LFSPR P
Sbjct: 380 EDPKPRLPPPPVPPPL---LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFP 436
Query: 301 PP 302
P
Sbjct: 437 FP 438
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPH--GANWVRPNLSIMPPLAPTS-ASADTTEA 248
P +FS + SL S G LGP+ P + H G + ++ S PL ++ S+D
Sbjct: 320 PPSFSPVVDSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLP 379
Query: 249 ADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGP--------QILSENWLFSPRSP 300
D P +P PP PPP P G P P +L E LFSPR P
Sbjct: 380 EDPKPRLPPPPVPPPL---LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFP 436
Query: 301 PP 302
P
Sbjct: 437 FP 438
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPH--GANWVRPNLSIMPPLAPTS-ASADTTEA 248
P +FS + SL S G LGP+ P + H G + ++ S PL ++ S+D
Sbjct: 320 PPSFSPVVDSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLP 379
Query: 249 ADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGP--------QILSENWLFSPRSP 300
D P +P PP PPP P G P P +L E LFSPR P
Sbjct: 380 EDPKPRLPPPPVPPPL---LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFP 436
Query: 301 PP 302
P
Sbjct: 437 FP 438
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPH--GANWVRPNLSIMPPLAPTS-ASADTTEA 248
P +FS + SL S G LGP+ P + H G + ++ S PL ++ S+D
Sbjct: 320 PPSFSPVVDSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLP 379
Query: 249 ADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGP--------QILSENWLFSPRSP 300
D P +P PP PPP P G P P +L E LFSPR P
Sbjct: 380 EDPKPRLPPPPVPPPL---LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFP 436
Query: 301 PP 302
P
Sbjct: 437 FP 438
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 41.6 bits (96), Expect = 0.001
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 227 RPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
RP S++PPL+P A+ PP+P PP PPP P P
Sbjct: 600 RPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPP 644
Score = 37.7 bits (86), Expect = 0.014
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPV--PAPPTPPPQEGP 267
P KPL P P V P ++ P PT + P P+PPTPP P
Sbjct: 778 PPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPP 837
Query: 268 EDKPTRFSYKGR---NPFWRGPQILSENWLFSPRSPPPGAQGGGPRDP 312
P + S+ + +P P ++ + P P P A P P
Sbjct: 838 PTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKP 885
Score = 33.5 bits (75), Expect = 0.27
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGP 267
P P PLP A +P ++I P + + + T+AA PP P PP PP ++ P
Sbjct: 764 PPPPPIPAPLPPQAP-PKPLVTIPAPTSTKTVAPVVTQAA---PPTPTPPVPPAKKQP 817
Score = 30.4 bits (67), Expect = 2.3
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 208 LGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPP-PVPAPPTPPPQEG 266
+ PQ P P W ++ + P P + PP PVPAPP PPP
Sbjct: 890 VAPQSPPAVKAKP---KWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPP--- 943
Query: 267 PEDKPT 272
P PT
Sbjct: 944 PTASPT 949
Score = 29.3 bits (64), Expect = 5.1
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 234 PPLAPTSASADTTEAADVPP----PVPAPPTPPPQEG 266
PP P S VPP P P PP PPP G
Sbjct: 686 PPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPG 722
Score = 29.3 bits (64), Expect = 5.1
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED 269
P P P+P + + PP +P S + + P PPTPP E
Sbjct: 826 PSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVK--QIASQFPPPPTPPAMESQPL 883
Query: 270 KPTRFSYKGRNPFWRGPQILSE-NW------LFSPRSPPP 302
KP + ++P P + ++ W + SP PPP
Sbjct: 884 KPVPANVAPQSP----PAVKAKPKWQPSSIPVPSPDFPPP 919
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 230 LSIMPPLAPTSASADTTEAADVPPPVPAP-PTPPPQEGPEDKPTRFSYKGRNPFWRGPQI 288
L+ P AP A A AA P P PAP P P P P+ P + +G N RG +
Sbjct: 167 LAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEP 226
Query: 289 LSENWLFSPRSPPPGA 304
L++ L S S P A
Sbjct: 227 LADQ-LHSGISGRPAA 241
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 230 LSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
+++ PPL P + S D E A P +P+ P P P P P
Sbjct: 102 VAVSPPLEPAAESLDGLEEA--PEQLPSVPVPAPASTPPPVP 141
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 230 LSIMPPLAPTSASADTTEAADVPPPVPAP-PTPPPQEGPEDKPTRFSYKGRNPFWRGPQI 288
L+ P AP A A AA P P PAP P P P P+ P + +G N RG +
Sbjct: 167 LAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEP 226
Query: 289 LSENWLFSPRSPPPGA 304
L++ L S S P A
Sbjct: 227 LADQ-LHSGISGRPAA 241
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 230 LSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
+++ PPL P + S D E A P +P+ P P P P P
Sbjct: 102 VAVSPPLEPAAESLDGLEEA--PEQLPSVPVPAPASTPPPVP 141
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 230 LSIMPPLAPTSASADTTEAADVPPPVPAP-PTPPPQEGPEDKPTRFSYKGRNPFWRGPQI 288
L+ P AP A A AA P P PAP P P P P+ P + +G N RG +
Sbjct: 178 LAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEP 237
Query: 289 LSENWLFSPRSPPPGA 304
L++ L S S P A
Sbjct: 238 LADQ-LHSGISGRPAA 252
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 230 LSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKP 271
+++ PPL P + S D E A P +P+ P P P P P
Sbjct: 113 VAVSPPLEPAAESLDGLEEA--PEQLPSVPVPAPASTPPPVP 152
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 14/91 (15%)
Query: 234 PPLAPTSASADTTEAADVPPPVP----APPTPPPQEGPEDKPTRFSYKGRNPFWRGPQIL 289
P PT A T+ PPP P P TPP GP P G P +GP
Sbjct: 147 PGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP-KQGP--- 202
Query: 290 SENWLFSPRSPPPGAQGGGPRDPDGHSMSLP 320
P P G GGP+ G +S P
Sbjct: 203 ------GPGGPKGGKMPGGPKPGGGPGLSTP 227
Score = 34.3 bits (77), Expect = 0.16
Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 234 PPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENW 293
PP P+S T A PPP PA P P GP+ P KG GP+
Sbjct: 166 PPTPPSSGVPTTPPQAGGPPPPPA-AVPGPGPGPKQGPGPGGPKG-GKMPGGPKPGGGPG 223
Query: 294 LFSP--RSPPPGAQGGGPRDPDGH 315
L +P PP GG PR H
Sbjct: 224 LSTPGGHPKPPHRGGGEPRGGRQH 247
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/97 (32%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 218 PLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYK 277
PLP G +LS PP+ P SA PPP+P P + P P P S
Sbjct: 657 PLPSGLG----SLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPA 712
Query: 278 GRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDG 314
NP GP P PPPG P P G
Sbjct: 713 PPNP--GGP---------PPAPPPPGL---APPPPPG 735
Score = 37.4 bits (85), Expect = 0.019
Identities = 31/98 (31%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Query: 228 PNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQ 287
P SI PP S + A +PP PP PPP P P S G P P
Sbjct: 648 PPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPP-SSAGPPPPPPPPP 706
Query: 288 ILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLPLLQGL 325
+ P SP P GG P P ++ P GL
Sbjct: 707 L--------PNSPAPPNPGGPPPAPPPPGLAPPPPPGL 736
Score = 28.5 bits (62), Expect = 8.7
Identities = 17/54 (31%), Positives = 21/54 (38%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPP 263
P P PLP ++ P PPL + A + PPP P PPP
Sbjct: 681 PPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPP 734
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 39.7 bits (91), Expect = 0.004
Identities = 31/83 (37%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSAS--ADTTEAA 249
PV S + S V P L + P+P A P L + P P A A T AA
Sbjct: 294 PVPLSAPAPAPLSVPVSAPPLALIQAPVPPSA----PTLVLAPVPTPVLAPMPASTPPAA 349
Query: 250 DVPPPVPAPPTPPPQEGPEDKPT 272
PP VP P TP P GP PT
Sbjct: 350 PAPPSVPMP-TPTPSSGPPSTPT 371
Score = 28.9 bits (63), Expect = 6.7
Identities = 15/53 (28%), Positives = 20/53 (37%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPP 262
P P P P ++ +++P APT A T P P P P P
Sbjct: 350 PAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATP 402
Score = 28.5 bits (62), Expect = 8.7
Identities = 25/79 (31%), Positives = 28/79 (35%), Gaps = 13/79 (16%)
Query: 207 VLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSA----SADTTEAADVPPPVPAP---- 258
VL P P+P P +P PT + S T A P PVPAP
Sbjct: 329 VLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAP 388
Query: 259 -----PTPPPQEGPEDKPT 272
PTP P P PT
Sbjct: 389 IFTPAPTPMPAATPAAIPT 407
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 39.3 bits (90), Expect = 0.005
Identities = 34/123 (27%), Positives = 41/123 (33%), Gaps = 16/123 (13%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV 251
P FS + + G+ GP++ P PP AP S +
Sbjct: 271 PAEFSYPVDNQRGSGLAGPKRSSVVSPSH-------------PPPAPPLGSPPGPKPGFA 317
Query: 252 PPPVPAPPTPPPQEG--PEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGP 309
PPP P PP PPP G P P F G P P +P PPP P
Sbjct: 318 PPPAPPPP-PPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYP 376
Query: 310 RDP 312
P
Sbjct: 377 TLP 379
Score = 33.1 bits (74), Expect = 0.36
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 228 PNLSIMPPLAPTSASADTTEAADVPPPVPAP-PTPPPQEGPEDKP 271
P + P L P S T A PPP P P P PPP G + +P
Sbjct: 370 PPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQP 414
Score = 31.6 bits (70), Expect = 1.0
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 206 GVLGPQKPLTKDPLPHGANWVRPNLSIMPPLA-----PTSASADTTEAADVPPPVPAPPT 260
G G P + P ++ P PP A P + T A PPP P PP
Sbjct: 342 GSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG 401
Query: 261 PPP 263
PPP
Sbjct: 402 PPP 404
Score = 30.0 bits (66), Expect = 3.0
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 20/76 (26%)
Query: 204 SKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPP--------V 255
S G P P + P P A PP P +AD +PPP
Sbjct: 343 SPGTPPPPSPPSFPPHPDFA---------APPPPPPPPAAD---YPTLPPPPLSQPTGGA 390
Query: 256 PAPPTPPPQEGPEDKP 271
P PP PPP GP P
Sbjct: 391 PPPPPPPPPPGPPPPP 406
>gi|122937223 NOBOX oogenesis homeobox [Homo sapiens]
Length = 490
Score = 39.3 bits (90), Expect = 0.005
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 13/73 (17%)
Query: 235 PLAPTSASADTTEAADVPPPVPAPPTPPP--QEGPEDKPTRFSYKGRNPFWRGPQILSEN 292
P AP AS+ + AA++ P VP P P P QE P D F P +L+ +
Sbjct: 374 PAAPGPASSQCSSAAEILPAVPMEPKPDPFPQESPLD-----------TFPEPPMLLTSD 422
Query: 293 WLFSPRSPPPGAQ 305
+P P GAQ
Sbjct: 423 QTLAPTQPSEGAQ 435
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 39.3 bits (90), Expect = 0.005
Identities = 37/129 (28%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 190 SLPVAFSCLKFS---LQSKGVLGPQKPLTKDP-LPHGANWVRPNLSIMPPLAPTSASADT 245
S+P+ S L + + P P+ P +P A P S+ PLAP SASA
Sbjct: 1860 SIPILASALASTSAPTPAPAASSPAAPVITAPTIPASA----PTASV--PLAPASASAPA 1913
Query: 246 TEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQ 305
V P PAPP P + KP +NP Q S + PPP +
Sbjct: 1914 PAPTPVSAPNPAPPAPAQTQAQTHKPV------QNPLQTTSQ--------SSKQPPPSIR 1959
Query: 306 GGGPRDPDG 314
+ P+G
Sbjct: 1960 LPSAQTPNG 1968
Score = 29.6 bits (65), Expect = 3.9
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 244 DTTEAADVPPPVPAPPTPPPQEGPEDKP 271
+ TE D+PPP P PP PP P+ P
Sbjct: 1051 EKTEKKDLPPP-PPPPQPPAPIQPQSVP 1077
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 38.9 bits (89), Expect = 0.006
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 31/120 (25%)
Query: 217 DPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVP-------------------- 256
+PLP G V P PPL P++A + A PPP+P
Sbjct: 89 NPLPQG---VPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGL 145
Query: 257 APPTPPPQEGPEDKP---TRFSYKGRN---PFWRGPQILSENWLFSPRSPPPGAQGGGPR 310
PP PP GP P + S G P P +L L P PPPG G G R
Sbjct: 146 PPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCP--PPPGGPGAGKR 203
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 20/131 (15%)
Query: 206 GVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTT--------EAADVPPPVPA 257
GVL P P PL V+P+ PP+A + +T E +PPP P
Sbjct: 380 GVLHPAPPPIAPPL------VQPS----PPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 258 PPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-PGAQGGGPRDPDGHS 316
PP PPP P P + P P + P PP P +Q +P H
Sbjct: 430 PPLPPPGIRP-SSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHP 488
Query: 317 MSLPLLQGLSS 327
+LP++ S
Sbjct: 489 STLPVISDARS 499
Score = 33.1 bits (74), Expect = 0.36
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 210 PQKPLT-KDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV---PPPVPAPPTPP 262
PQ P T + P+ +V P PP P++ S + A+ PPPVP PP PP
Sbjct: 308 PQSPATGRTPV-----FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
Score = 28.5 bits (62), Expect = 8.7
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 13/78 (16%)
Query: 208 LGPQKPLTKDPLPHGANWVRPNLSIM----PPLAPTSASADTTEAADVPPPVPAP----- 258
+ P P PLP + S+ PP+ P T A PP PAP
Sbjct: 320 VSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Query: 259 ----PTPPPQEGPEDKPT 272
P PPP P +P+
Sbjct: 380 GVLHPAPPPIAPPLVQPS 397
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 20/131 (15%)
Query: 206 GVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTT--------EAADVPPPVPA 257
GVL P P PL V+P+ PP+A + +T E +PPP P
Sbjct: 380 GVLHPAPPPIAPPL------VQPS----PPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 258 PPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-PGAQGGGPRDPDGHS 316
PP PPP P P + P P + P PP P +Q +P H
Sbjct: 430 PPLPPPGIRP-SSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHP 488
Query: 317 MSLPLLQGLSS 327
+LP++ S
Sbjct: 489 STLPVISDARS 499
Score = 33.1 bits (74), Expect = 0.36
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 210 PQKPLT-KDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV---PPPVPAPPTPP 262
PQ P T + P+ +V P PP P++ S + A+ PPPVP PP PP
Sbjct: 308 PQSPATGRTPV-----FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
Score = 28.5 bits (62), Expect = 8.7
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 13/78 (16%)
Query: 208 LGPQKPLTKDPLPHGANWVRPNLSIM----PPLAPTSASADTTEAADVPPPVPAP----- 258
+ P P PLP + S+ PP+ P T A PP PAP
Sbjct: 320 VSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Query: 259 ----PTPPPQEGPEDKPT 272
P PPP P +P+
Sbjct: 380 GVLHPAPPPIAPPLVQPS 397
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 20/131 (15%)
Query: 206 GVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTT--------EAADVPPPVPA 257
GVL P P PL V+P+ PP+A + +T E +PPP P
Sbjct: 380 GVLHPAPPPIAPPL------VQPS----PPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 258 PPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-PGAQGGGPRDPDGHS 316
PP PPP P P + P P + P PP P +Q +P H
Sbjct: 430 PPLPPPGIRP-SSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHP 488
Query: 317 MSLPLLQGLSS 327
+LP++ S
Sbjct: 489 STLPVISDARS 499
Score = 33.1 bits (74), Expect = 0.36
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 210 PQKPLT-KDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV---PPPVPAPPTPP 262
PQ P T + P+ +V P PP P++ S + A+ PPPVP PP PP
Sbjct: 308 PQSPATGRTPV-----FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
Score = 28.5 bits (62), Expect = 8.7
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 13/78 (16%)
Query: 208 LGPQKPLTKDPLPHGANWVRPNLSIM----PPLAPTSASADTTEAADVPPPVPAP----- 258
+ P P PLP + S+ PP+ P T A PP PAP
Sbjct: 320 VSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Query: 259 ----PTPPPQEGPEDKPT 272
P PPP P +P+
Sbjct: 380 GVLHPAPPPIAPPLVQPS 397
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 20/131 (15%)
Query: 206 GVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTT--------EAADVPPPVPA 257
GVL P P PL V+P+ PP+A + +T E +PPP P
Sbjct: 380 GVLHPAPPPIAPPL------VQPS----PPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 258 PPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-PGAQGGGPRDPDGHS 316
PP PPP P P + P P + P PP P +Q +P H
Sbjct: 430 PPLPPPGIRP-SSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHP 488
Query: 317 MSLPLLQGLSS 327
+LP++ S
Sbjct: 489 STLPVISDARS 499
Score = 33.1 bits (74), Expect = 0.36
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 210 PQKPLT-KDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADV---PPPVPAPPTPP 262
PQ P T + P+ +V P PP P++ S + A+ PPPVP PP PP
Sbjct: 308 PQSPATGRTPV-----FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
Score = 28.5 bits (62), Expect = 8.7
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 13/78 (16%)
Query: 208 LGPQKPLTKDPLPHGANWVRPNLSIM----PPLAPTSASADTTEAADVPPPVPAP----- 258
+ P P PLP + S+ PP+ P T A PP PAP
Sbjct: 320 VSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Query: 259 ----PTPPPQEGPEDKPT 272
P PPP P +P+
Sbjct: 380 GVLHPAPPPIAPPLVQPS 397
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 38.5 bits (88), Expect = 0.008
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 255 VPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPP-PGA-----QGGG 308
V P PPP P + +KGR P R P +E L PR PP PGA +
Sbjct: 36 VEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPP 95
Query: 309 PRDPDGHSMSLP 320
PR P S++ P
Sbjct: 96 PRAPRASSLAAP 107
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 38.5 bits (88), Expect = 0.008
Identities = 39/128 (30%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 211 QKPLTKDPLPHGANWVRPNLSIMPPLAPTSAS--ADTTEA----ADVPP----PVPAPPT 260
Q P ++ P P PN +I PL P ++ +T+EA PP P P PPT
Sbjct: 124 QGPGSRAPSPR-----LPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPT 178
Query: 261 PPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLP 320
PPP P P S + P P L++ L P P A P P LP
Sbjct: 179 PPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLP 238
Query: 321 LLQGLSSE 328
LS +
Sbjct: 239 PASVLSDK 246
Score = 34.3 bits (77), Expect = 0.16
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query: 192 PVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSI-MPPLAPTSASADTTEAAD 250
P + LK S + P PLP A+ P S+ PPL ++S++T
Sbjct: 269 PCGYPGLKAEPASPAQDAQEPPAPPPPLPPYAS-CSPRASLPAPPLPGVNSSSETPPP-- 325
Query: 251 VPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPR 310
+PP P+ PP + G + P + G PF L R PGA GGG
Sbjct: 326 LPPKSPSFQAPPQKAGAQALPAPPAPPGSQPF-----------LQKKRHGRPGA-GGGKL 373
Query: 311 DP 312
+P
Sbjct: 374 NP 375
Score = 32.0 bits (71), Expect = 0.79
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 17/67 (25%)
Query: 207 VLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEG 266
++ P PLTK LP V P + PP P PPP P PP PP
Sbjct: 200 LVSPPGPLTKGNLPV----VAPPVPCAPPPPP-------------PPPPPTPPPLPPASV 242
Query: 267 PEDKPTR 273
DK +
Sbjct: 243 LSDKAVK 249
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 210 PQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVP--APPTPPP 263
P P PLP + P +S PL + PPP P PPTPPP
Sbjct: 181 PPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPP 236
Score = 30.8 bits (68), Expect = 1.8
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 9/63 (14%)
Query: 202 LQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAAD--VPPPVPAPP 259
L K V PL P+P P L ++PP A+ A PP P PP
Sbjct: 243 LSDKAVKPQLAPLHLPPIP-------PPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPP 295
Query: 260 TPP 262
PP
Sbjct: 296 LPP 298
Score = 30.0 bits (66), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 252 PPPVPAPPTPPPQEGPEDKP 271
PPP P PP PPP P P
Sbjct: 6 PPPPPLPPPPPPLGAPPPPP 25
Score = 29.6 bits (65), Expect = 3.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 252 PPPVPAPPTPPPQEGPEDKPT----RFSYKGRN 280
PPP+ APP PPP P T R KGR+
Sbjct: 15 PPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRS 47
>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
Length = 980
Score = 38.5 bits (88), Expect = 0.008
Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 211 QKPLTKDPLPHGANWVRPNLSIMPPLAPTSASADTTEAADVPPPVPAPPTPPPQEGPED- 269
Q P+ + P P G +PP P VPPP P PP+ PP GP
Sbjct: 334 QPPVVEGPPPPG----------LPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
Query: 270 ----KPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLPLLQGL 325
+P+ + P +++ P PP D DG++ P +
Sbjct: 384 LPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNT 443
Query: 326 S 326
S
Sbjct: 444 S 444
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 38.5 bits (88), Expect = 0.008
Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 16/109 (14%)
Query: 234 PPLAPTSASADTTEAADVPPPVPAPP---TPPPQEGPEDKPT------------RFSYKG 278
PPL P A T E P P P+PP +P PQE P T + +
Sbjct: 216 PPLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAA 275
Query: 279 RNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLPLLQGLSS 327
++P RGP + PR PR P + S PL G SS
Sbjct: 276 QSPH-RGPSDTKRADVAGPRPCQRSLSVLSPRQPAQNRESTPLASGPSS 323
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,330,092
Number of Sequences: 37866
Number of extensions: 1064463
Number of successful extensions: 16526
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 525
Number of HSP's that attempted gapping in prelim test: 9575
Number of HSP's gapped (non-prelim): 4655
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.