Guide to the Human Genome
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Name: WFDC10B Sequence: fasta or formatted (89aa) NCBI GI: 26006867
Description:

WAP four-disulfide core domain 10B isoform b

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [73aa] WAP four-disulfide core domain 10B isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          3           1
 C cysteine           11.2         10           2
 D aspartate           2.2          2           1
 E glutamate           4.5          4           1
 F phenylalanine       3.4          3           1
 G glycine             4.5          4           1
 H histidine           3.4          3           2
 I isoleucine          9.0          8           1
 K lysine              5.6          5           1
 L leucine             9.0          8           2
 M methionine          2.2          2           1
 N asparagine          4.5          4           1
 P proline             2.2          2           1
 Q glutamine           2.2          2           1
 R arginine            9.0          8           3
 S serine             11.2         10           1
 T threonine           4.5          4           1
 V valine              3.4          3           1
 W tryptophan          1.1          1           1
 Y tyrosine            3.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAP four-disulfide core domain 10B isoform b 
WFDC10B               0.440   WAP four-disulfide core domain 10B isoform a precurs...
WFDC10A               0.220   WAP four-disulfide core domain 10A precursor 
WFDC11                0.071   WAP four-disulfide core domain 11 precursor 
WFDC13                0.071   WAP four-disulfide core domain 13 precursor 
WFDC9                 0.048   protease inhibitor WAP9 
WFDC3                 0.036   WAP four-disulfide core domain 3 precursor 
WFDC2                 0.030   WAP four-disulfide core domain 2 precursor 
KAL1                  0.024   Kallmann syndrome 1 protein precursor 
SPINLW1               0.018   serine peptidase inhibitor-like, with Kunitz and WAP...
SPINLW1               0.018   serine peptidase inhibitor-like, with Kunitz and WAP...
TDRD9                 0.018   tudor domain containing 9 
WFIKKN2               0.018   WFIKKN2 protein 
RIMS2                 0.006   regulating synaptic membrane exocytosis 2 isoform a...
CTNNA1                0.006   catenin, alpha 1 
C5orf34               0.006   hypothetical protein LOC375444 
C12orf49              0.006   hypothetical protein LOC79794 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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