Search of human proteins with 25777650

Search of human proteins with 25777650

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25777650 small conductance calcium-activated potassium
channel protein 3 isoform b [Homo sapiens]
         (426 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25777650 small conductance calcium-activated potassium channe...   838   0.0  
gi|116805330 small conductance calcium-activated potassium chann...   828   0.0  
gi|25777645 small conductance calcium-activated potassium channe...   669   0.0  
gi|25777643 potassium intermediate/small conductance calcium-act...   613   e-176
gi|25777647 small conductance calcium-activated potassium channe...   335   5e-92
gi|4504859 intermediate conductance calcium-activated potassium ...   320   2e-87
gi|236462242 potassium voltage-gated channel, KQT-like subfamily...    50   5e-06
gi|236462079 potassium voltage-gated channel, KQT-like subfamily...    49   7e-06
gi|28373065 potassium voltage-gated channel, KQT-like subfamily,...    49   7e-06
gi|26638655 potassium voltage-gated channel KQT-like protein 4 i...    49   7e-06
gi|26638653 potassium voltage-gated channel KQT-like protein 4 i...    49   7e-06
gi|26051268 potassium voltage-gated channel KQT-like protein 2 i...    46   6e-05
gi|26051260 potassium voltage-gated channel KQT-like protein 2 i...    46   6e-05
gi|26051262 potassium voltage-gated channel KQT-like protein 2 i...    45   1e-04
gi|26051264 potassium voltage-gated channel KQT-like protein 2 i...    45   1e-04
gi|26051266 potassium voltage-gated channel KQT-like protein 2 i...    45   1e-04
gi|236461942 potassium voltage-gated channel, KQT-like subfamily...    45   2e-04
gi|236461719 potassium voltage-gated channel, KQT-like subfamily...    45   2e-04
gi|9789987 potassium voltage-gated channel, Shal-related subfami...    44   2e-04
gi|27436981 potassium voltage-gated channel, Shal-related subfam...    44   3e-04
gi|45383011 potassium voltage-gated channel, delayed-rectifier, ...    44   4e-04
gi|27436984 potassium voltage-gated channel, Shal-related subfam...    43   5e-04
gi|27436986 potassium voltage-gated channel, Shal-related subfam...    43   5e-04
gi|4758630 potassium voltage-gated channel KQT-like protein 3 [H...    43   5e-04
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             42   0.001
gi|4504821 potassium voltage-gated channel, shaker-related subfa...    41   0.002
gi|32479525 potassium voltage-gated channel, KQT-like subfamily,...    40   0.004
gi|32479527 potassium voltage-gated channel, KQT-like subfamily,...    40   0.004
gi|27436974 potassium voltage-gated channel, Shab-related subfam...    40   0.005
gi|25952087 potassium voltage-gated channel, shaker-related subf...    39   0.007

>gi|25777650 small conductance calcium-activated potassium channel
           protein 3 isoform b [Homo sapiens]
          Length = 426

 Score =  838 bits (2164), Expect = 0.0
 Identities = 426/426 (100%), Positives = 426/426 (100%)

Query: 1   MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILY 60
           MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILY
Sbjct: 1   MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILY 60

Query: 61  ISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLH 120
           ISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLH
Sbjct: 61  ISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLH 120

Query: 121 SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYH 180
           SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYH
Sbjct: 121 SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYH 180

Query: 181 DQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK 240
           DQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK
Sbjct: 181 DQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK 240

Query: 241 LELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFL 300
           LELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFL
Sbjct: 241 LELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFL 300

Query: 301 QAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEH 360
           QAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEH
Sbjct: 301 QAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEH 360

Query: 361 LTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPY 420
           LTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPY
Sbjct: 361 LTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPY 420

Query: 421 TSSSSC 426
           TSSSSC
Sbjct: 421 TSSSSC 426


>gi|116805330 small conductance calcium-activated potassium channel
           protein 3 isoform a [Homo sapiens]
          Length = 731

 Score =  828 bits (2138), Expect = 0.0
 Identities = 421/421 (100%), Positives = 421/421 (100%)

Query: 6   KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM 65
           KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM
Sbjct: 311 KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM 370

Query: 66  LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT 125
           LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT
Sbjct: 371 LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT 430

Query: 126 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV 185
           DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV
Sbjct: 431 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV 490

Query: 186 TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 245
           TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK
Sbjct: 491 TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 550

Query: 246 AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ 305
           AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ
Sbjct: 551 AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ 610

Query: 306 LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASF 365
           LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASF
Sbjct: 611 LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASF 670

Query: 366 NSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSS 425
           NSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSS
Sbjct: 671 NSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSS 730

Query: 426 C 426
           C
Sbjct: 731 C 731


>gi|25777645 small conductance calcium-activated potassium channel
           protein 2 isoform a [Homo sapiens]
          Length = 579

 Score =  669 bits (1725), Expect = 0.0
 Identities = 339/418 (81%), Positives = 370/418 (88%)

Query: 6   KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM 65
           K S++SLALKCLISLSTIILLGLII YH RE+QLF++DNGADDWRIAMTYERI +I LE+
Sbjct: 162 KASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEI 221

Query: 66  LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT 125
           LVCAIHPIPG Y F WTARLAFSY PS   ADVDIILSIPMFLRLYLIARVMLLHSKLFT
Sbjct: 222 LVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFT 281

Query: 126 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV 185
           DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVR CERYHDQQDV
Sbjct: 282 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDV 341

Query: 186 TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 245
           TSNFLGAMWLISITFLSIGYGDMVP+TYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK
Sbjct: 342 TSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 401

Query: 246 AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ 305
           AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYK+TKL+KKIDHAKVRKHQRKFLQAIHQ
Sbjct: 402 AEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQ 461

Query: 306 LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASF 365
           LRSVKMEQRKL+DQANTLVDL+K QN+MYD+I++LN+RSED EK+I +LE+KLE L  S 
Sbjct: 462 LRSVKMEQRKLNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSI 521

Query: 366 NSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSS 423
           ++LP LI+ T+RQQQ+  + A +E+    V      +  S      SST+ PT   SS
Sbjct: 522 HALPGLISQTIRQQQRDFIEAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 579


>gi|25777643 potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1 [Homo
           sapiens]
          Length = 543

 Score =  613 bits (1582), Expect = e-176
 Identities = 302/375 (80%), Positives = 340/375 (90%), Gaps = 3/375 (0%)

Query: 6   KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM 65
           K+S++S ALKCLISLST ILLGL++ YH RE+QLF++DNGADDWRIAMT ER+  ISLE+
Sbjct: 134 KESLYSFALKCLISLSTAILLGLVVLYHAREIQLFMVDNGADDWRIAMTCERVFLISLEL 193

Query: 66  LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT 125
            VCAIHP+PG Y+F WTARLAF+Y PS AEADVD++LSIPMFLRLYL+ RVMLLHSK+FT
Sbjct: 194 AVCAIHPVPGHYRFTWTARLAFTYAPSVAEADVDVLLSIPMFLRLYLLGRVMLLHSKIFT 253

Query: 126 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV 185
           DASSRSIGALNKI FNTRFVMKTLMTICPGTVLLVFSIS WIIAAWTVRVCERYHD+Q+V
Sbjct: 254 DASSRSIGALNKITFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEV 313

Query: 186 TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 245
           TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK
Sbjct: 314 TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 373

Query: 246 AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ 305
           AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHT+L+KK D A+VRKHQRKFLQAIHQ
Sbjct: 374 AEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTRLVKKPDQARVRKHQRKFLQAIHQ 433

Query: 306 ---LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLT 362
              LRSVK+EQ KL+DQANTL DL+K Q VMYDL++EL+ + E+LE ++ +LES+L+ L 
Sbjct: 434 AQKLRSVKIEQGKLNDQANTLTDLAKTQTVMYDLVSELHAQHEELEARLATLESRLDALG 493

Query: 363 ASFNSLPLLIADTLR 377
           AS  +LP LIA  +R
Sbjct: 494 ASLQALPGLIAQAIR 508


>gi|25777647 small conductance calcium-activated potassium channel
           protein 2 isoform b [Homo sapiens]
          Length = 231

 Score =  335 bits (859), Expect = 5e-92
 Identities = 172/231 (74%), Positives = 196/231 (84%)

Query: 193 MWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN 252
           MWLISITFLSIGYGDMVP+TYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN
Sbjct: 1   MWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN 60

Query: 253 FMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKME 312
           FMMDTQLTKR+KNAAANVLRETWLIYK+TKL+KKIDHAKVRKHQRKFLQAIHQLRSVKME
Sbjct: 61  FMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKME 120

Query: 313 QRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLI 372
           QRKL+DQANTLVDL+K QN+MYD+I++LN+RSED EK+I +LE+KLE L  S ++LP LI
Sbjct: 121 QRKLNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLI 180

Query: 373 ADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSS 423
           + T+RQQQ+  + A +E+    V      +  S      SST+ PT   SS
Sbjct: 181 SQTIRQQQRDFIEAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 231


>gi|4504859 intermediate conductance calcium-activated potassium
           channel protein 1 [Homo sapiens]
          Length = 427

 Score =  320 bits (819), Expect = 2e-87
 Identities = 174/362 (48%), Positives = 234/362 (64%), Gaps = 16/362 (4%)

Query: 8   SMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEMLV 67
           +++   +KC IS+ST +LL LI+A+H +EVQLF+ DNG  DWR+A+T  +   I LE++V
Sbjct: 55  ALYLFLVKCTISISTFLLLCLIVAFHAKEVQLFMTDNGLRDWRVALTGRQAAQIVLELVV 114

Query: 68  CAIHPIP-------GEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLH 120
           C +HP P        +     T+   +     + EA    +LS+ M LRLYL+ R +LL 
Sbjct: 115 CGLHPAPVRGPPCVQDLGAPLTSPQPWPGFLGQGEA----LLSLAMLLRLYLVPRAVLLR 170

Query: 121 SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYH 180
           S +  +AS RSIGALN++ F   FV K  M   PG +LL  ++ LW+  AW + V ER  
Sbjct: 171 SGVLLNASYRSIGALNQVRFRHWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAER-- 228

Query: 181 DQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK 240
              + T +    +WLI ITFL+IGYGD+VP T  GK VCL TG+MG  CTAL+VAVVARK
Sbjct: 229 QAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARK 288

Query: 241 LELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFL 300
           LE  KAEKHVHNFMMD Q TK +K +AA VL+E W+ YKHT+  +K  HA  R+HQRK L
Sbjct: 289 LEFNKAEKHVHNFMMDIQYTKEMKESAARVLQEAWMFYKHTR--RKESHA-ARRHQRKLL 345

Query: 301 QAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEH 360
            AI+  R V+++ RKL +Q N++VD+SKM  ++YDL   L+     LEKQI +L  KL+ 
Sbjct: 346 AAINAFRQVRLKHRKLREQVNSMVDISKMHMILYDLQQNLSSSHRALEKQIDTLAGKLDA 405

Query: 361 LT 362
           LT
Sbjct: 406 LT 407


>gi|236462242 potassium voltage-gated channel, KQT-like subfamily,
           member 5 isoform 5 [Homo sapiens]
          Length = 822

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 14/153 (9%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I +++ V + E+  D     S +  A+W  +IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 278 IFSSFLVYLVEK--DANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALLG 335

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AAN+++  W  Y   +  K 
Sbjct: 336 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAADE--KS 387

Query: 287 IDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQ 319
           +  A  + H    L+A+H     K EQ + S +
Sbjct: 388 VSIATWKPH----LKALHTCSPTKKEQGEASSR 416


>gi|236462079 potassium voltage-gated channel, KQT-like subfamily,
           member 5 isoform 4 [Homo sapiens]
          Length = 951

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 14/151 (9%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I +++ V + E+  D     S +  A+W  +IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 278 IFSSFLVYLVEK--DANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALLG 335

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AAN+++  W  Y   +  K 
Sbjct: 336 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAADE--KS 387

Query: 287 IDHAKVRKHQRKFLQAIHQLRSVKMEQRKLS 317
           +  A  + H    L+A+H     K EQ + S
Sbjct: 388 VSIATWKPH----LKALHTCSPTKKEQGEAS 414


>gi|28373065 potassium voltage-gated channel, KQT-like subfamily,
           member 5 isoform 1 [Homo sapiens]
          Length = 932

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 14/151 (9%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I +++ V + E+  D     S +  A+W  +IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 278 IFSSFLVYLVEK--DANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALLG 335

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AAN+++  W  Y   +  K 
Sbjct: 336 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAADE--KS 387

Query: 287 IDHAKVRKHQRKFLQAIHQLRSVKMEQRKLS 317
           +  A  + H    L+A+H     K EQ + S
Sbjct: 388 VSIATWKPH----LKALHTCSPTKKEQGEAS 414


>gi|26638655 potassium voltage-gated channel KQT-like protein 4
           isoform b [Homo sapiens]
          Length = 641

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I A++ V + E+  D     S++  ++W  +IT  +IGYGD  PHT+ G+ +     ++G
Sbjct: 250 IFASFLVYLAEK--DANSDFSSYADSLWWGTITLTTIGYGDKTPHTWLGRVLAAGFALLG 307

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIY 278
               AL   ++     L   E+H           ++ +  AAN+++  W +Y
Sbjct: 308 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRMPAANLIQAAWRLY 353


>gi|26638653 potassium voltage-gated channel KQT-like protein 4
           isoform a [Homo sapiens]
          Length = 695

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I A++ V + E+  D     S++  ++W  +IT  +IGYGD  PHT+ G+ +     ++G
Sbjct: 250 IFASFLVYLAEK--DANSDFSSYADSLWWGTITLTTIGYGDKTPHTWLGRVLAAGFALLG 307

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIY 278
               AL   ++     L   E+H           ++ +  AAN+++  W +Y
Sbjct: 308 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRMPAANLIQAAWRLY 353


>gi|26051268 potassium voltage-gated channel KQT-like protein 2
           isoform e [Homo sapiens]
          Length = 393

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 9/141 (6%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I+A++ V + E+   + D    +  A+W   IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AA +++  W  Y  T L + 
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354

Query: 287 IDHAKVRKHQRKFLQAIHQLR 307
             H+  + ++R     +++ R
Sbjct: 355 DLHSTWQYYERTVTVPMYRYR 375


>gi|26051260 potassium voltage-gated channel KQT-like protein 2
           isoform c [Homo sapiens]
          Length = 844

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 9/140 (6%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I+A++ V + E+   + D    +  A+W   IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AA +++  W  Y  T L + 
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354

Query: 287 IDHAKVRKHQRKFLQAIHQL 306
             H+  + ++R     +++L
Sbjct: 355 DLHSTWQYYERTVTVPMYRL 374


>gi|26051262 potassium voltage-gated channel KQT-like protein 2
           isoform b [Homo sapiens]
          Length = 854

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I+A++ V + E+   + D    +  A+W   IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AA +++  W  Y  T L + 
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354

Query: 287 IDHAKVRKHQR 297
             H+  + ++R
Sbjct: 355 DLHSTWQYYER 365


>gi|26051264 potassium voltage-gated channel KQT-like protein 2
           isoform a [Homo sapiens]
          Length = 872

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I+A++ V + E+   + D    +  A+W   IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AA +++  W  Y  T L + 
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354

Query: 287 IDHAKVRKHQR 297
             H+  + ++R
Sbjct: 355 DLHSTWQYYER 365


>gi|26051266 potassium voltage-gated channel KQT-like protein 2
           isoform d [Homo sapiens]
          Length = 841

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I+A++ V + E+   + D    +  A+W   IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AA +++  W  Y  T L + 
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354

Query: 287 IDHAKVRKHQR 297
             H+  + ++R
Sbjct: 355 DLHSTWQYYER 365


>gi|236461942 potassium voltage-gated channel, KQT-like subfamily,
           member 5 isoform 3 [Homo sapiens]
          Length = 942

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 14/138 (10%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I +++ V + E+  D     S +  A+W  +IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 278 IFSSFLVYLVEK--DANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALLG 335

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AAN+++  W  Y   +  K 
Sbjct: 336 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAADE--KS 387

Query: 287 IDHAKVRKHQRKFLQAIH 304
           +  A  + H    L+A+H
Sbjct: 388 VSIATWKPH----LKALH 401


>gi|236461719 potassium voltage-gated channel, KQT-like subfamily,
           member 5 isoform 2 [Homo sapiens]
          Length = 923

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 14/138 (10%)

Query: 167 IIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG 226
           I +++ V + E+  D     S +  A+W  +IT  +IGYGD  P T+ G+ +     ++G
Sbjct: 278 IFSSFLVYLVEK--DANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALLG 335

Query: 227 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKK 286
               AL   ++     L   E+H           ++ +N AAN+++  W  Y   +  K 
Sbjct: 336 ISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAADE--KS 387

Query: 287 IDHAKVRKHQRKFLQAIH 304
           +  A  + H    L+A+H
Sbjct: 388 VSIATWKPH----LKALH 401


>gi|9789987 potassium voltage-gated channel, Shal-related subfamily,
           member 2 [Homo sapiens]
          Length = 630

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 143 RFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLS 202
           R +  TL +       L+FS+++ II   TV             ++   A W   +T  +
Sbjct: 311 RILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPAAFWYTIVTMTT 370

Query: 203 IGYGDMVPHTYCGK---GVCLLTGIM 225
           +GYGDMVP T  GK    +C L+G++
Sbjct: 371 LGYGDMVPKTIAGKIFGSICSLSGVL 396


>gi|27436981 potassium voltage-gated channel, Shal-related
           subfamily, member 1 [Homo sapiens]
          Length = 647

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 143 RFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLS 202
           R +  TL +       L+FS+++ II   TV         +   ++   A W   +T  +
Sbjct: 313 RILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGTNKTNFTSIPAAFWYTIVTMTT 372

Query: 203 IGYGDMVPHTYCGK---GVCLLTGIM 225
           +GYGDMVP T  GK    +C L+G++
Sbjct: 373 LGYGDMVPSTIAGKIFGSICSLSGVL 398


>gi|45383011 potassium voltage-gated channel, delayed-rectifier,
           subfamily S, member 2 [Homo sapiens]
          Length = 477

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 25/230 (10%)

Query: 10  FSLALKCLISLSTIILLGLIIAYHTREVQLFVID----NGADDWRIAMT-YERILYISLE 64
           +S+  +    LS ++++G II      +  F I     N  +D R  +  +  I + + E
Sbjct: 182 YSVLSRVFSILSILVVMGSIITMCLNSLPDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFE 241

Query: 65  MLVCAIHPIPGEYKFFWTARLAF---SYTPSRAEADVDIIL-SIPMFLRLYLIARVMLLH 120
            LV      P   KFF  A       S  P      V++++ S P    L  +A+V+ L 
Sbjct: 242 -LVARFAVAPDFLKFFKNALNLIDLMSIVPFYITLVVNLVVESTPTLANLGRVAQVLRLM 300

Query: 121 SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFS--ISLWIIAAWTVRVCER 178
                   +R    L  +    ++  K +     G +LL  S  IS++ + A+T+     
Sbjct: 301 RIFRILKLARHSTGLRSLGATLKYSYKEV-----GLLLLYLSVGISIFSVVAYTIE---- 351

Query: 179 YHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGK---GVCLLTGIM 225
             ++ +  +      W  +++  ++GYGD+VP T  GK     C+L GI+
Sbjct: 352 -KEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTASACILAGIL 400


>gi|27436984 potassium voltage-gated channel, Shal-related
           subfamily, member 3 isoform 1 [Homo sapiens]
          Length = 655

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 143 RFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLS 202
           R +  TL +       L+FS+++ II   TV             ++   + W   +T  +
Sbjct: 308 RILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTT 367

Query: 203 IGYGDMVPHTYCGK---GVCLLTGIM 225
           +GYGDMVP T  GK    +C L+G++
Sbjct: 368 LGYGDMVPKTIAGKIFGSICSLSGVL 393


>gi|27436986 potassium voltage-gated channel, Shal-related
           subfamily, member 3 isoform 2 [Homo sapiens]
          Length = 636

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 143 RFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLS 202
           R +  TL +       L+FS+++ II   TV             ++   + W   +T  +
Sbjct: 308 RILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTT 367

Query: 203 IGYGDMVPHTYCGK---GVCLLTGIM 225
           +GYGDMVP T  GK    +C L+G++
Sbjct: 368 LGYGDMVPKTIAGKIFGSICSLSGVL 393


>gi|4758630 potassium voltage-gated channel KQT-like protein 3 [Homo
           sapiens]
          Length = 872

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 6/121 (4%)

Query: 158 LLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKG 217
           L++ S  ++++      V  +  + ++    +  A+W   IT  +IGYGD  P T+ G+ 
Sbjct: 272 LILSSFLVYLVEKDVPEVDAQGEEMKEEFETYADALWWGLITLATIGYGDKTPKTWEGRL 331

Query: 218 VCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLI 277
           +     ++G    AL   ++   L L   E+H           ++ +  AA +++  W  
Sbjct: 332 IAATFSLIGVSFFALPAGILGSGLALKVQEQHRQKHF------EKRRKPAAELIQAAWRY 385

Query: 278 Y 278
           Y
Sbjct: 386 Y 386


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 5/158 (3%)

Query: 231  ALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHA 290
            AL+  +   K +L+K    + N   + +   +   AA   L +T    KH   ++  +  
Sbjct: 850  ALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTL 909

Query: 291  KVRKHQRKFLQ----AIHQLR-SVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSE 345
            K +K  +K L+    A HQL+  +   Q +L    NTL    K +  +   I EL   SE
Sbjct: 910  KEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSE 969

Query: 346  DLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQL 383
              +KQI +L+ +L+        L   +   L Q  Q+L
Sbjct: 970  QKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQEL 1007



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 25/138 (18%)

Query: 242 ELTKAEKHVHNFMMDTQ--------LTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVR 293
           EL K  + V  ++ + Q        LT++ +    N+L++      +TKL +K +   V 
Sbjct: 275 ELAKGPQEVAVYVQELQKLKSSVNELTQKNQTLTENLLKKE---QDYTKLEEKHNEESVS 331

Query: 294 KHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSE---DLEKQ 350
           K   K +QA    + +  +Q +          LS  +  ++ +  EL+++ E    L+++
Sbjct: 332 K---KNIQATLHQKDLDCQQLQSR--------LSASETSLHRIHVELSEKGEATQKLKEE 380

Query: 351 IGSLESKLEHLTASFNSL 368
           +  +E+K +HL A F  L
Sbjct: 381 LSEVETKYQHLKAEFKQL 398



 Score = 30.0 bits (66), Expect = 4.2
 Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 5/143 (3%)

Query: 243 LTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKL-LKKIDHAKVRKHQR--KF 299
           L+ +E  +H   ++              L E    Y+H K   K++   +  K Q   + 
Sbjct: 353 LSASETSLHRIHVELSEKGEATQKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQL 412

Query: 300 LQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLE 359
              I+QL S  +E  +   +A+    L + + +  + + +   +  DL+ ++  LE +L+
Sbjct: 413 QSEINQLHSKLLETERQLGEAHGR--LKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLK 470

Query: 360 HLTASFNSLPLLIADTLRQQQQQ 382
               +   L   +  T +Q Q+Q
Sbjct: 471 EKVTNSTELQHQLDKTKQQHQEQ 493


>gi|4504821 potassium voltage-gated channel, shaker-related
           subfamily, member 6 [Homo sapiens]
          Length = 529

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/91 (30%), Positives = 39/91 (42%)

Query: 147 KTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYG 206
           KTL        LL+F + + +I   +        D   +  +   A W   +T  ++GYG
Sbjct: 367 KTLQASMRELGLLIFFLFIGVILFSSAVYFAEADDDDSLFPSIPDAFWWAVVTMTTVGYG 426

Query: 207 DMVPHTYCGKGVCLLTGIMGAGCTALVVAVV 237
           DM P T  GK V  L  I G    AL V V+
Sbjct: 427 DMYPMTVGGKIVGSLCAIAGVLTIALPVPVI 457


>gi|32479525 potassium voltage-gated channel, KQT-like subfamily,
           member 1 isoform 2 [Homo sapiens]
          Length = 549

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 188 NFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVV----ARKLEL 243
           ++  A+W   +T  +IGYGD VP T+ GK +     +      AL   ++    A K++ 
Sbjct: 171 SYADALWWGVVTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAGILGSGFALKVQQ 230

Query: 244 TKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIY 278
            + +KH +          R   AAA++++  W  Y
Sbjct: 231 KQRQKHFN----------RQIPAAASLIQTAWRCY 255


>gi|32479527 potassium voltage-gated channel, KQT-like subfamily,
           member 1 isoform 1 [Homo sapiens]
          Length = 676

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 188 NFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVV----ARKLEL 243
           ++  A+W   +T  +IGYGD VP T+ GK +     +      AL   ++    A K++ 
Sbjct: 298 SYADALWWGVVTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAGILGSGFALKVQQ 357

Query: 244 TKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIY 278
            + +KH +          R   AAA++++  W  Y
Sbjct: 358 KQRQKHFN----------RQIPAAASLIQTAWRCY 382


>gi|27436974 potassium voltage-gated channel, Shab-related
           subfamily, member 2 [Homo sapiens]
          Length = 911

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 9/114 (7%)

Query: 155 GTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYC 214
           G ++L  ++ + I ++  V   E+  D    TS    + W  +IT  ++GYGD+ P T  
Sbjct: 336 GLLILFLAMGIMIFSS-LVFFAEKDEDATKFTS-IPASFWWATITMTTVGYGDIYPKTLL 393

Query: 215 GK---GVCLLTGIMGAGCTALVVAVVARKL-ELTKAEKHVHNFMMDTQLTKRIK 264
           GK   G+C + G++     AL + ++     E  K +K     +   +  +R K
Sbjct: 394 GKIVGGLCCIAGVL---VIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAK 444


>gi|25952087 potassium voltage-gated channel, shaker-related
           subfamily, member 5 [Homo sapiens]
          Length = 613

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 29/91 (31%), Positives = 40/91 (43%)

Query: 147 KTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYG 206
           KTL        LL+F + + +I   +        +Q    S+   A W   +T  ++GYG
Sbjct: 425 KTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGTHFSSIPDAFWWAVVTMTTVGYG 484

Query: 207 DMVPHTYCGKGVCLLTGIMGAGCTALVVAVV 237
           DM P T  GK V  L  I G    AL V V+
Sbjct: 485 DMRPITVGGKIVGSLCAIAGVLTIALPVPVI 515


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,667,471
Number of Sequences: 37866
Number of extensions: 524340
Number of successful extensions: 2867
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 2662
Number of HSP's gapped (non-prelim): 304
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.