Guide to the Human Genome
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Name: KLRAQ1 Sequence: fasta or formatted (769aa) NCBI GI: 24308420
Description:

KLRAQ motif containing 1 isoform 2

Referenced in:

Centromere Proteins
Coiled-Coil Proteins

Other entries for this name:
alt prot [780aa] KLRAQ motif containing 1 isoform 1
alt prot [734aa] KLRAQ motif containing 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         66           3
 C cysteine            1.2          9           1
 D aspartate           4.0         31           1
 E glutamate          10.1         78           3
 F phenylalanine       2.5         19           2
 G glycine             2.6         20           1
 H histidine           2.5         19           1
 I isoleucine          3.9         30           2
 K lysine              9.1         70           3
 L leucine            13.4        103           2
 M methionine          2.3         18           2
 N asparagine          4.0         31           2
 P proline             2.1         16           1
 Q glutamine           7.2         55           2
 R arginine            4.4         34           2
 S serine              9.4         72           3
 T threonine           5.6         43           3
 V valine              4.3         33           2
 W tryptophan          0.1          1           1
 Y tyrosine            2.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KLRAQ motif containing 1 isoform 2 
KLRAQ1                0.994   KLRAQ motif containing 1 isoform 1 
KLRAQ1                0.935   KLRAQ motif containing 1 isoform 3 
CENPE                 0.040   centromere protein E 
MYH1                  0.035   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.035   myosin, heavy polypeptide 4, skeletal muscle 
MYH2                  0.034   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.034   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH7                  0.032   myosin, heavy chain 7, cardiac muscle, beta 
MYH3                  0.030   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH8                  0.030   myosin, heavy chain 8, skeletal muscle, perinatal [...
EEA1                  0.029   early endosome antigen 1, 162kD 
MYH6                  0.028   myosin heavy chain 6 
CCDC88A               0.028   coiled-coil domain containing 88A isoform 1 
MYH11                 0.028   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.028   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
CCDC18                0.028   sarcoma antigen NY-SAR-41 
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CCDC88A               0.027   coiled-coil domain containing 88A isoform 2 
GOLGA4                0.027   golgi autoantigen, golgin subfamily a, 4 
MYH13                 0.026   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CLIP1                 0.026   restin isoform b 
CLIP1                 0.026   restin isoform a 
MYH9                  0.025   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.025   myosin, heavy polypeptide 10, non-muscle 
UACA                  0.025   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.025   uveal autoantigen with coiled-coil domains and ankyr...
MYH7B                 0.024   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
TRIP11                0.023   thyroid hormone receptor interactor 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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