IKIP 23654

Name: IKIP	Sequence: fasta or formatted (377aa)		NCBI GI: 24233517
Description: IKK interacting protein isoform 1		Referenced in: Additional Stress Response Functions
Other entries for this name: alt prot [70aa] IKK interacting protein isoform 3.1 alt prot [350aa] IKK interacting protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 16 2 C cysteine 0.8 3 1 D aspartate 5.3 20 2 E glutamate 13.0 49 3 F phenylalanine 3.2 12 1 G glycine 4.8 18 4 H histidine 1.9 7 1 I isoleucine 6.1 23 1 K lysine 8.8 33 2 L leucine 10.6 40 2 M methionine 3.7 14 1 N asparagine 4.5 17 2 P proline 1.9 7 1 Q glutamine 6.9 26 2 R arginine 3.4 13 1 S serine 8.8 33 2 T threonine 6.1 23 1 V valine 4.0 15 1 W tryptophan 0.8 3 1 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 IKK interacting protein isoform 1 IKIP 0.300 IKK interacting protein isoform 2 IKIP 0.138 IKK interacting protein isoform 3.1 MYH9 0.059 myosin, heavy polypeptide 9, non-muscle MYH10 0.058 myosin, heavy polypeptide 10, non-muscle KIF20B 0.058 M-phase phosphoprotein 1 KTN1 0.055 kinectin 1 isoform b KTN1 0.055 kinectin 1 isoform a KTN1 0.055 kinectin 1 isoform c KTN1 0.055 kinectin 1 isoform a MYH7 0.052 myosin, heavy chain 7, cardiac muscle, beta MYH11 0.051 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.051 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.051 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.051 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CENPE 0.049 centromere protein E EEA1 0.049 early endosome antigen 1, 162kD MYH8 0.048 myosin, heavy chain 8, skeletal muscle, perinatal [... MACF1 0.046 microfilament and actin filament cross-linker protei... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH6 0.045 myosin heavy chain 6 FILIP1 0.045 filamin A interacting protein 1 ROCK1 0.045 Rho-associated, coiled-coil containing protein kinase... SMC4 0.045 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 0.045 SMC4 structural maintenance of chromosomes 4-like 1 ... CEP110 0.045 centrosomal protein 110kDa MYH13 0.044 myosin, heavy polypeptide 13, skeletal muscle [Homo... MIA3 0.044 melanoma inhibitory activity family, member 3 [Homo... CLIP1 0.044 restin isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.