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Search of human proteins with 239756564
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756564 PREDICTED: similar to hCG1793095 [Homo sapiens]
(98 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756564 PREDICTED: similar to hCG1793095 [Homo sapiens] 204 9e-54
gi|169217819 PREDICTED: similar to hCG1793095 [Homo sapiens] 200 2e-52
gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7 [... 162 4e-41
gi|239755573 PREDICTED: similar to ectonucleotide pyrophosphatas... 81 2e-16
gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5 (... 61 2e-10
gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4 (p... 53 6e-08
gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6 [... 52 1e-07
gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3 ... 44 3e-05
gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens] 38 0.002
gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens] 38 0.002
gi|91823274 autotaxin isoform 1 preproprotein [Homo sapiens] 38 0.002
gi|38569407 arylsulfatase B isoform 2 precursor [Homo sapiens] 36 0.006
gi|38569405 arylsulfatase B isoform 1 precursor [Homo sapiens] 36 0.006
gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1 ... 33 0.037
gi|157266309 arylsulfatase E precursor [Homo sapiens] 32 0.083
gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Hom... 30 0.41
gi|58743319 arylsulfatase family, member H [Homo sapiens] 30 0.41
gi|59797060 arylsulfatase family, member I [Homo sapiens] 29 0.92
gi|4503899 galactosamine (N-acetyl)-6-sulfate sulfatase precurso... 29 0.92
gi|31742482 arylsulfatase F precursor [Homo sapiens] 29 0.92
gi|223942069 enterokinase precursor [Homo sapiens] 27 3.5
gi|109389362 arylsulfatase J [Homo sapiens] 27 3.5
gi|53831991 steryl-sulfatase precursor [Homo sapiens] 27 4.6
gi|110578649 cache domain containing 1 [Homo sapiens] 27 4.6
>gi|239756564 PREDICTED: similar to hCG1793095 [Homo sapiens]
Length = 98
Score = 204 bits (520), Expect = 9e-54
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD 60
MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD
Sbjct: 1 MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD 60
Query: 61 GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMGPGGGRA 98
GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMGPGGGRA
Sbjct: 61 GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMGPGGGRA 98
>gi|169217819 PREDICTED: similar to hCG1793095 [Homo sapiens]
Length = 167
Score = 200 bits (508), Expect = 2e-52
Identities = 96/98 (97%), Positives = 96/98 (97%)
Query: 1 MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD 60
MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD
Sbjct: 1 MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD 60
Query: 61 GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMGPGGGRA 98
GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMGPGG A
Sbjct: 61 GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMGPGGAAA 98
>gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7
[Homo sapiens]
Length = 458
Score = 162 bits (411), Expect = 4e-41
Identities = 80/92 (86%), Positives = 83/92 (90%)
Query: 1 MRGPTVLLTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD 60
MRG VLLTVAL TLLAP AGAPVQSQGS+NKLLLVSFD FRWNY+QDVDTPNLDAMARD
Sbjct: 1 MRGLAVLLTVALATLLAPGAGAPVQSQGSQNKLLLVSFDGFRWNYDQDVDTPNLDAMARD 60
Query: 61 GVKARYMTPAFVTMTSPCHFTLVTGEYCPRMG 92
GVKARYMTPAFVTMTSPCHFTLVTG+Y G
Sbjct: 61 GVKARYMTPAFVTMTSPCHFTLVTGKYIENHG 92
>gi|239755573 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 (putative function)
[Homo sapiens]
Length = 661
Score = 81.3 bits (199), Expect = 2e-16
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 11 ALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARDGVKARYMTPA 70
A + P P + ++LLL+SF FRW+ +QDVDTPN+D +A +GVKA+Y+ P
Sbjct: 7 AAAAIACPAGRPPPPREEEHSQLLLISFQGFRWDXDQDVDTPNMDHLAGEGVKAKYLMPP 66
Query: 71 FVTMTSPCHFTLVTGE 86
VTMTSP HFT + G+
Sbjct: 67 LVTMTSPFHFTAMPGK 82
>gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5
(putative function) [Homo sapiens]
Length = 477
Score = 61.2 bits (147), Expect = 2e-10
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 27 QGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGE 86
Q + K+LLVSFD FRW+Y V TP+ + + GV + +T F+T T P H+TLVTG
Sbjct: 24 QPDQQKVLLVSFDGFRWDYLYKVPTPHFHYIMKYGVHVKQVTNVFITKTYPNHYTLVTGL 83
Query: 87 YCPRMG 92
+ G
Sbjct: 84 FAENHG 89
>gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4
(putative function) [Homo sapiens]
Length = 453
Score = 52.8 bits (125), Expect = 6e-08
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 32 KLLLVSFDSFRWNYEQDVDTPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEY 87
KLLLVSFD FR +Y ++ + P+L ++GV ++ F+T T P H+++VTG Y
Sbjct: 27 KLLLVSFDGFRADYLKNYEFPHLQNFIKEGVLVEHVKNVFITKTFPNHYSIVTGLY 82
>gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6
[Homo sapiens]
Length = 440
Score = 52.0 bits (123), Expect = 1e-07
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 8 LTVALPTLLAPRAGAPVQSQGSRNKLLLVSFDSFRWNYEQDV---DTPNLDAMARDGVKA 64
+ V L TLL A Q +R KLL+ D FR +Y D P + GVK
Sbjct: 1 MAVKLGTLLLALALGLAQPASARRKLLVFLLDGFRSDYISDEALESLPGFKEIVSRGVKV 60
Query: 65 RYMTPAFVTMTSPCHFTLVTGEYC 88
Y+TP F +++ P ++TL+TG +C
Sbjct: 61 DYLTPDFPSLSYPNYYTLMTGRHC 84
>gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3
[Homo sapiens]
Length = 875
Score = 43.9 bits (102), Expect = 3e-05
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 33 LLLVSFDSFRWNYEQDVDT--PNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEY 87
++L S D FR Y DT PN++ + G+ ++YM + T T P H+T+VTG Y
Sbjct: 161 VILFSMDGFRAEYLYTWDTLMPNINKLKTCGIHSKYMRAMYPTKTFPNHYTIVTGLY 217
>gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]
Length = 888
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 30 RNKLLLVSFDSFRWNYEQDVDT--PNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEY 87
R L++ S D FR +Y + PN++ + G + YM P + T T P +TL TG Y
Sbjct: 163 RPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHSPYMRPVYPTKTFPNLYTLATGLY 222
>gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]
Length = 863
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 30 RNKLLLVSFDSFRWNYEQDVDT--PNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEY 87
R L++ S D FR +Y + PN++ + G + YM P + T T P +TL TG Y
Sbjct: 163 RPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHSPYMRPVYPTKTFPNLYTLATGLY 222
>gi|91823274 autotaxin isoform 1 preproprotein [Homo sapiens]
Length = 915
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 30 RNKLLLVSFDSFRWNYEQDVDT--PNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEY 87
R L++ S D FR +Y + PN++ + G + YM P + T T P +TL TG Y
Sbjct: 163 RPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHSPYMRPVYPTKTFPNLYTLATGLY 222
>gi|38569407 arylsulfatase B isoform 2 precursor [Homo sapiens]
Length = 413
Score = 36.2 bits (82), Expect = 0.006
Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 2 RGP---TVLLTVALPTLLAPRAGAPVQSQGSRNK--LLLVSFDSFRWN----YEQDVDTP 52
RGP +LL V LP LL P G+ L+ + D WN + + TP
Sbjct: 11 RGPGPRRLLLPVVLPLLLLLLLAPPGSGAGASRPPHLVFLLADDLGWNDVGFHGSRIRTP 70
Query: 53 NLDAMARDGVKA-RYMTPAFVTMTSPCHFTLVTGEYCPRMG 92
+LDA+A GV Y T T P L+TG Y R G
Sbjct: 71 HLDALAAGGVLLDNYYTQPLCT---PSRSQLLTGRYQIRTG 108
>gi|38569405 arylsulfatase B isoform 1 precursor [Homo sapiens]
Length = 533
Score = 36.2 bits (82), Expect = 0.006
Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 2 RGP---TVLLTVALPTLLAPRAGAPVQSQGSRNK--LLLVSFDSFRWN----YEQDVDTP 52
RGP +LL V LP LL P G+ L+ + D WN + + TP
Sbjct: 11 RGPGPRRLLLPVVLPLLLLLLLAPPGSGAGASRPPHLVFLLADDLGWNDVGFHGSRIRTP 70
Query: 53 NLDAMARDGVKA-RYMTPAFVTMTSPCHFTLVTGEYCPRMG 92
+LDA+A GV Y T T P L+TG Y R G
Sbjct: 71 HLDALAAGGVLLDNYYTQPLCT---PSRSQLLTGRYQIRTG 108
>gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1
[Homo sapiens]
Length = 925
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 34 LLVSFDSFRWNYEQDVD--TPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEY 87
LL S D FR Y P + + + G + M P + T T P H+++VTG Y
Sbjct: 213 LLFSLDGFRAEYLHTWGGLLPVISKLKKCGTYTKNMRPVYPTKTFPNHYSIVTGLY 268
>gi|157266309 arylsulfatase E precursor [Homo sapiens]
Length = 589
Score = 32.3 bits (72), Expect = 0.083
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 16 LAPRAGAPVQSQGSRNKLLLVSFDSFRWNY-----EQDVDTPNLDAMARDGVKARYMTPA 70
LAP A + + + SR +LL+ D + TPN+D +A DGVK A
Sbjct: 25 LAPSASSDISA--SRPNILLLMADDLGIGDIGCYGNNTMRTPNIDRLAEDGVKLTQHISA 82
Query: 71 FVTMTSPCHFTLVTGEYCPRMG 92
++ +P +TG Y R G
Sbjct: 83 -ASLCTPSRAAFLTGRYPVRSG 103
>gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Homo
sapiens]
Length = 1103
Score = 30.0 bits (66), Expect = 0.41
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 GPT-VLLTVALPTLLAPRAGAPVQ-SQGSRNKLLLVSFDSFRWNYEQDVDTPNLDAMARD 60
GP ++LTV T L P G + +QGSR+ L S R Q +D+PN+ D
Sbjct: 499 GPNKIILTVDDITFLHPHGGTSRKVAQGSRSSLGARSMSDIRSGPSQHLDSPNIGVYEGD 558
Query: 61 GV 62
V
Sbjct: 559 RV 560
>gi|58743319 arylsulfatase family, member H [Homo sapiens]
Length = 562
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 49 VDTPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEYCPRMG 92
V TPN+D +A +GV+ A +M +P +TG Y R G
Sbjct: 30 VSTPNIDRLASEGVRLTQHLAA-ASMCTPSRAAFLTGRYPIRSG 72
>gi|59797060 arylsulfatase family, member I [Homo sapiens]
Length = 569
Score = 28.9 bits (63), Expect = 0.92
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 48 DVDTPNLDAMARDGVKAR--YMTPAFVTMTSPCHFTLVTGEY 87
D++TP LD +A GVK Y+ P + +P L+TG Y
Sbjct: 68 DIETPTLDRLAAKGVKLENYYIQP----ICTPSRSQLLTGRY 105
>gi|4503899 galactosamine (N-acetyl)-6-sulfate sulfatase precursor
[Homo sapiens]
Length = 522
Score = 28.9 bits (63), Expect = 0.92
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 15 LLAPRAGAPVQSQGSRNKLLLVSFDSFRWNY-----EQDVDTPNLDAMARDGVKARYMTP 69
L+ AG +LL+ D W E +TPNLD MA +G+ + P
Sbjct: 15 LVLSAAGMGASGAPQPPNILLLLMDDMGWGDLGVYGEPSRETPNLDRMAAEGL----LFP 70
Query: 70 AFVT---MTSPCHFTLVTGEYCPRMG 92
F + + SP L+TG R G
Sbjct: 71 NFYSANPLCSPSRAALLTGRLPIRNG 96
>gi|31742482 arylsulfatase F precursor [Homo sapiens]
Length = 590
Score = 28.9 bits (63), Expect = 0.92
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 51 TPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEYCPRMG 92
TP++D +AR+GV+ A ++ SP +TG Y R G
Sbjct: 55 TPHIDRLAREGVRLTQHISA-ASLCSPSRSAFLTGRYPIRSG 95
>gi|223942069 enterokinase precursor [Homo sapiens]
Length = 1019
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 55 DAMARDGVKARYMTPAFVTMTSPC---HFTLVTGEYCP 89
D +AR G KA + T + + PC HF GE P
Sbjct: 620 DVLARGGFKANFTTGYHLGIPEPCKADHFQCKNGECVP 657
>gi|109389362 arylsulfatase J [Homo sapiens]
Length = 599
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 48 DVDTPNLDAMARDGVKAR--YMTPAFVTMTSPCHFTLVTGEY 87
++ TP LD +A +GVK Y+ P + +P +TG+Y
Sbjct: 97 EIKTPTLDKLAAEGVKLENYYVQP----ICTPSRSQFITGKY 134
>gi|53831991 steryl-sulfatase precursor [Homo sapiens]
Length = 583
Score = 26.6 bits (57), Expect = 4.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 49 VDTPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGEYCPRMG 92
+ TPN+D +A GVK A + +P +TG Y R G
Sbjct: 50 IRTPNIDRLASGGVKLTQHLAA-SPLCTPSRAAFMTGRYPVRSG 92
>gi|110578649 cache domain containing 1 [Homo sapiens]
Length = 1223
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 10 VALPTLLAPRAGAPVQSQGSRNKLLLVSFD 39
VA PTL+ P+ APV+ Q +K LV+ D
Sbjct: 797 VAHPTLIDPKGHAPVEQQHITHKEPLVAND 826
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,131,156
Number of Sequences: 37866
Number of extensions: 153976
Number of successful extensions: 306
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 291
Number of HSP's gapped (non-prelim): 25
length of query: 98
length of database: 18,247,518
effective HSP length: 69
effective length of query: 29
effective length of database: 15,634,764
effective search space: 453408156
effective search space used: 453408156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.