Search of human proteins with 239753377

Search of human proteins with 239753377

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753377 PREDICTED: hypothetical protein [Homo sapiens]
         (328 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753377 PREDICTED: hypothetical protein [Homo sapiens]           667   0.0  
gi|239747944 PREDICTED: hypothetical protein XP_002346483 [Homo ...   667   0.0  
gi|239741839 PREDICTED: hypothetical protein XP_002342323 [Homo ...   575   e-164
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]               44   2e-04
gi|148529025 pleckstrin homology domain containing, family G (wi...    42   7e-04
gi|93141049 collagen, type XII, alpha 1 short isoform precursor ...    41   0.002
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [...    41   0.002
gi|42733592 hypothetical protein LOC399693 [Homo sapiens]              39   0.006
gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]            39   0.008
gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]            39   0.008
gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo ...    39   0.008
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]            37   0.024
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]            36   0.041
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]            36   0.041
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]            36   0.041
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]      36   0.041
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    35   0.070
gi|14249119 Rhox homeobox family, member 2 [Homo sapiens]              35   0.070
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    35   0.091
gi|91208420 bassoon protein [Homo sapiens]                             35   0.091
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      35   0.12 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    35   0.12 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    35   0.12 
gi|158508495 sex comb on midleg-like 4 [Homo sapiens]                  35   0.12 
gi|36796743 methylenetetrahydrofolate dehydrogenase (NADP+ depen...    34   0.16 
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]    34   0.20 
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi...    34   0.20 
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    33   0.27 
gi|153791494 Rhox homeobox family, member 2B [Homo sapiens]            33   0.27 
gi|11761629 fibrinogen, alpha polypeptide isoform alpha prepropr...    33   0.27 

>gi|239753377 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 328

 Score =  667 bits (1721), Expect = 0.0
 Identities = 328/328 (100%), Positives = 328/328 (100%)

Query: 1   MSAKVGVAGQAWQLQSSGISSCSVATRQLPRGASLEHLWNSAKNRKIMIYSPLLAPLQFP 60
           MSAKVGVAGQAWQLQSSGISSCSVATRQLPRGASLEHLWNSAKNRKIMIYSPLLAPLQFP
Sbjct: 1   MSAKVGVAGQAWQLQSSGISSCSVATRQLPRGASLEHLWNSAKNRKIMIYSPLLAPLQFP 60

Query: 61  LLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDEYGLTALPGPLAHR 120
           LLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDEYGLTALPGPLAHR
Sbjct: 61  LLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDEYGLTALPGPLAHR 120

Query: 121 LTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVGLSAVVQVVGHLSH 180
           LTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVGLSAVVQVVGHLSH
Sbjct: 121 LTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVGLSAVVQVVGHLSH 180

Query: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240
           VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA
Sbjct: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240

Query: 241 QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSF 300
           QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSF
Sbjct: 241 QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSF 300

Query: 301 PTSKPSEAATSIYSSPSGRSIRLRRSVR 328
           PTSKPSEAATSIYSSPSGRSIRLRRSVR
Sbjct: 301 PTSKPSEAATSIYSSPSGRSIRLRRSVR 328


>gi|239747944 PREDICTED: hypothetical protein XP_002346483 [Homo
           sapiens]
          Length = 328

 Score =  667 bits (1721), Expect = 0.0
 Identities = 328/328 (100%), Positives = 328/328 (100%)

Query: 1   MSAKVGVAGQAWQLQSSGISSCSVATRQLPRGASLEHLWNSAKNRKIMIYSPLLAPLQFP 60
           MSAKVGVAGQAWQLQSSGISSCSVATRQLPRGASLEHLWNSAKNRKIMIYSPLLAPLQFP
Sbjct: 1   MSAKVGVAGQAWQLQSSGISSCSVATRQLPRGASLEHLWNSAKNRKIMIYSPLLAPLQFP 60

Query: 61  LLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDEYGLTALPGPLAHR 120
           LLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDEYGLTALPGPLAHR
Sbjct: 61  LLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDEYGLTALPGPLAHR 120

Query: 121 LTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVGLSAVVQVVGHLSH 180
           LTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVGLSAVVQVVGHLSH
Sbjct: 121 LTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVGLSAVVQVVGHLSH 180

Query: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240
           VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA
Sbjct: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240

Query: 241 QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSF 300
           QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSF
Sbjct: 241 QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSF 300

Query: 301 PTSKPSEAATSIYSSPSGRSIRLRRSVR 328
           PTSKPSEAATSIYSSPSGRSIRLRRSVR
Sbjct: 301 PTSKPSEAATSIYSSPSGRSIRLRRSVR 328


>gi|239741839 PREDICTED: hypothetical protein XP_002342323 [Homo
           sapiens]
          Length = 281

 Score =  575 bits (1482), Expect = e-164
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 48  MIYSPLLAPLQFPLLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDE 107
           MIYSPLLAPLQFPLLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDE
Sbjct: 1   MIYSPLLAPLQFPLLESIGKSERSSVRSNDGLGRDAHAPVVHWQLLAGQVLRPRVAVLDE 60

Query: 108 YGLTALPGPLAHRLTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVG 167
           YGLTALPGPLAHRLTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVG
Sbjct: 61  YGLTALPGPLAHRLTGLDGLVLEVNGADGRVHGTEEEEQIGAAVGAQQTFELLDGQDGVG 120

Query: 168 LSAVVQVVGHLSHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAA 227
           LSAVVQVVGHLSHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAA
Sbjct: 121 LSAVVQVVGHLSHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAA 180

Query: 228 DHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALP 287
           DHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALP
Sbjct: 181 DHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALP 240

Query: 288 SSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRSIRLRRSVR 328
           SSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRSIRLRRSVR
Sbjct: 241 SSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRSIRLRRSVR 281


>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
          Length = 1336

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 19/99 (19%)

Query: 194 LTGCSPSPGHPEQAESSQG-KQPGPQQQHPSRAAADHDPGRMGQ----GAAAQWTPKGPL 248
           L G  P PG    ++  QG +QP P QQ P   A    PG  GQ    G   Q  P+GP 
Sbjct: 582 LLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPP 641

Query: 249 RRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALP 287
                      QG G     G   F+G   P G P+ LP
Sbjct: 642 LH---------QGGG-----GPQGFMGPQGPQGPPQGLP 666



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 10/108 (9%)

Query: 182 PGQGLAQGDADGLTGCSPSPGHPEQ-------AESSQGKQPGPQQQHPSRAAADHDPGRM 234
           PGQG       G     PS   P             Q + PGPQ Q   +    H  G  
Sbjct: 589 PGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGG 648

Query: 235 GQGAAAQWTPKGPLRRLRLPRCKWTQG-SGSFSSPGNHRFLGSNSPNG 281
            QG      P+GP +   LPR +   G  G    PG H  LG   P G
Sbjct: 649 PQGFMGPQGPQGPPQ--GLPRPQDMHGPQGMQRHPGPHGPLGPQGPPG 694


>gi|148529025 pleckstrin homology domain containing, family G (with
           RhoGef domain) member 4B [Homo sapiens]
          Length = 1271

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 46/148 (31%), Positives = 57/148 (38%), Gaps = 24/148 (16%)

Query: 187 AQGD--ADGLTGCSPSPGHPEQAESSQGKQPGPQ---QQHPSRAAADHDPGRMGQGAAAQ 241
           A GD     LTG S   G    A  +Q +  GP+   QQ PS     H P R G GAA +
Sbjct: 16  ALGDLACSSLTGASRDLGTGAVASGTQEETSGPRGDPQQTPSLEKERHTPSRTGPGAAGR 75

Query: 242 WTPKGPLRRLRLPRCK--------WTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRP 293
             P+      R PR           T    + S PG H  LG  +  G P  +P      
Sbjct: 76  TLPRRSRSWERAPRSSRGAQAAACHTSHHSAGSRPGGH--LGGQAV-GTPNCVPVEG--- 129

Query: 294 CRPGCSFPTSKPSEAATSIYSSPSGRSI 321
             PGC   T +    A+S   S  G S+
Sbjct: 130 --PGC---TKEEDVLASSACVSTDGGSL 152


>gi|93141049 collagen, type XII, alpha 1 short isoform precursor [Homo
            sapiens]
          Length = 1899

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 15/141 (10%)

Query: 182  PGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQ 241
            PG    +G+  G++G    PG P       G Q  P  Q P+  +   + GR G      
Sbjct: 1594 PGAKGPRGER-GISGAIGPPG-PRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGM----- 1646

Query: 242  WTPKGPLRRLRLPRCKWTQG----SGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPG 297
               KG      LP    T G     G    PG+  F G +   G PR  P     P  PG
Sbjct: 1647 ---KGDAGEPGLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMG-PRGPPGPPGSPGSPG 1702

Query: 298  CSFPTSKPSEAATSIYSSPSG 318
             + P+ KP +        PSG
Sbjct: 1703 VTGPSGKPGKPGDHGRPGPSG 1723


>gi|93141047 collagen, type XII, alpha 1 long isoform precursor [Homo
            sapiens]
          Length = 3063

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 15/141 (10%)

Query: 182  PGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQ 241
            PG    +G+  G++G    PG P       G Q  P  Q P+  +   + GR G      
Sbjct: 2758 PGAKGPRGER-GISGAIGPPG-PRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGM----- 2810

Query: 242  WTPKGPLRRLRLPRCKWTQG----SGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPG 297
               KG      LP    T G     G    PG+  F G +   G PR  P     P  PG
Sbjct: 2811 ---KGDAGEPGLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMG-PRGPPGPPGSPGSPG 2866

Query: 298  CSFPTSKPSEAATSIYSSPSG 318
             + P+ KP +        PSG
Sbjct: 2867 VTGPSGKPGKPGDHGRPGPSG 2887


>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
          Length = 953

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 40/154 (25%), Positives = 54/154 (35%), Gaps = 14/154 (9%)

Query: 175 VGHLSHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPG-------PQQQHPSRAAA 227
           +GH S  P   LA G A     CSP      Q +    ++PG       P  Q P  A A
Sbjct: 483 LGHFSQRPWSALA-GQA-----CSPQRAWGAQRQGPSSQRPGSPPEKRSPFPQQPWSAVA 536

Query: 228 DHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALP 287
                R    A   W   GP  R  L R         +SS G  R        G+   + 
Sbjct: 537 TQPCPRRAWTACETWEDPGPRLRNPLERPS-PPAQRPWSSSGVQRAGPQGKGRGIGSPVS 595

Query: 288 SSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRSI 321
           ++ H   RP  SFP +   +   ++   P  R +
Sbjct: 596 AAKHALPRPTGSFPQNPLGKEKDTLRPCPRSRGL 629


>gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 503

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 13/105 (12%)

Query: 193 GLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAA--DHDPGRMGQGAAAQWTPKGPLRR 250
           GL G S  P  P+   SS GK+P  ++   S+AAA  D+DP R     A   T K  L  
Sbjct: 365 GLLGKSVRPKEPKH--SSPGKKPAGRKTRESQAAAREDNDPNRDEVPRAQLPTQKPELIS 422

Query: 251 LRLPRCKWTQGSGSFSSPGNHRFLGSNSPNG------VPRALPSS 289
           L + R +++ G  +  +P   + LG++ P+       VPR   SS
Sbjct: 423 LSVRRGEYSSGDPNIRAP---QVLGTSQPSAFTLRRLVPRCHASS 464


>gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 518

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 13/105 (12%)

Query: 193 GLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAA--DHDPGRMGQGAAAQWTPKGPLRR 250
           GL G S  P  P+   SS GK+P  ++   S+AAA  D+DP R     A   T K  L  
Sbjct: 365 GLLGKSVRPKEPKH--SSPGKKPAGRKTRESQAAAREDNDPNRDEVPRAQLPTQKPELIS 422

Query: 251 LRLPRCKWTQGSGSFSSPGNHRFLGSNSPNG------VPRALPSS 289
           L + R +++ G  +  +P   + LG++ P+       VPR   SS
Sbjct: 423 LSVRRGEYSSGDPNIRAP---QVLGTSQPSAFTLRRLVPRCHASS 464


>gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo
           sapiens]
          Length = 518

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 13/105 (12%)

Query: 193 GLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAA--DHDPGRMGQGAAAQWTPKGPLRR 250
           GL G S  P  P+   SS GK+P  ++   S+AAA  D+DP R     A   T K  L  
Sbjct: 365 GLLGKSVRPKEPKH--SSPGKKPAGRKTRESQAAAREDNDPNRDEVPRAQLPTQKPELIS 422

Query: 251 LRLPRCKWTQGSGSFSSPGNHRFLGSNSPNG------VPRALPSS 289
           L + R +++ G  +  +P   + LG++ P+       VPR   SS
Sbjct: 423 LSVRRGEYSSGDPNIRAP---QVLGTSQPSAFTLRRLVPRCHASS 464


>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 322

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 174 VVGHL-SHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPS---RAAADH 229
           V+G L + +P Q  A G + GL   SP  G  +   S +G  PGP+ QHP    RA  + 
Sbjct: 219 VLGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRG--PGPRAQHPGCRLRAGCEP 276

Query: 230 DPGRMGQGAAAQWTPKGP 247
             GR+G+G   +   + P
Sbjct: 277 SCGRLGRGYQQRLPSRSP 294


>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 41/128 (32%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 201 PGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQ 260
           PG     E  +G  PG     PS  A +    R   GAAA+  P+   R L   R + T 
Sbjct: 51  PGAAPAGEPRRG-DPGVA---PSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTG 106

Query: 261 GSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRS 320
           G G   +      +G       PRA P +  RP RP    P  + +   T    SPS R 
Sbjct: 107 GEGREGAQTREGKMGLPDSARRPRA-PRTPLRPERPAPGVPGGRVA-PCTCTSGSPSPRP 164

Query: 321 IRLRRSVR 328
            RLR S R
Sbjct: 165 RRLRVSGR 172


>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 41/128 (32%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 201 PGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQ 260
           PG     E  +G  PG     PS  A +    R   GAAA+  P+   R L   R + T 
Sbjct: 51  PGAAPAGEPRRG-DPGVA---PSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTG 106

Query: 261 GSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRS 320
           G G   +      +G       PRA P +  RP RP    P  + +   T    SPS R 
Sbjct: 107 GEGREGAQTREGKMGLPDSARRPRA-PRTPLRPERPAPGVPGGRVA-PCTCTSGSPSPRP 164

Query: 321 IRLRRSVR 328
            RLR S R
Sbjct: 165 RRLRVSGR 172


>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 41/128 (32%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 201 PGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQ 260
           PG     E  +G  PG     PS  A +    R   GAAA+  P+   R L   R + T 
Sbjct: 51  PGAAPAGEPRRG-DPGVA---PSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTG 106

Query: 261 GSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKPSEAATSIYSSPSGRS 320
           G G   +      +G       PRA P +  RP RP    P  + +   T    SPS R 
Sbjct: 107 GEGREGAQTREGKMGLPDSARRPRA-PRTPLRPERPAPGVPGGRVA-PCTCTSGSPSPRP 164

Query: 321 IRLRRSVR 328
            RLR S R
Sbjct: 165 RRLRVSGR 172


>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
          Length = 1446

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 43/171 (25%), Positives = 62/171 (36%), Gaps = 43/171 (25%)

Query: 174 VVGHLSHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQG--------------------- 212
           VVG+  +  G+G+ Q       G     G P Q   SQG                     
Sbjct: 618 VVGYDRNNTGKGVEQEVPSTAPGLGMDQGSPSQVNPSQGSPSQGSLRQESTSQASPSQRS 677

Query: 213 -KQPGPQQQHPSRAAADH---DPGRMGQGAAAQWTPKGPLRRLRLPRCKWTQGSGSFSSP 268
             Q  P Q +PS+ +  H     G   QG+ +Q +P              +QGS S +SP
Sbjct: 678 TSQGSPSQVNPSQRSTSHANSSQGSPSQGSPSQESP--------------SQGSTSQASP 723

Query: 269 GNHRFLGSNSPNGVPRALPSSSHRPCRPGCS-FPTSKPSE-AATSIYSSPS 317
            +   +G       P+A  S+   P  PG +  P + P +    SI   PS
Sbjct: 724 SHRNTIGVIGTTSSPKATGSTHSFP--PGATDGPLALPGQLQGNSIMEPPS 772


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 43/137 (31%), Positives = 50/137 (36%), Gaps = 20/137 (14%)

Query: 182 PGQGLAQ-----GDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQ 236
           PG GL Q     G   G +G  P P  P      Q +QP PQQ  P +    H P    Q
Sbjct: 36  PGMGLNQNRGPMGPGPGQSG--PKPPIPPPPPHQQQQQPPPQQP-PPQQPPPHQPPPHPQ 92

Query: 237 GAAAQWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSP--NGVPRALPSSSHRPC 294
               Q  P  P         K     G   +PG    +GS  P  +  P A P +S  P 
Sbjct: 93  PHQQQQPPPPP-----QDSSKPVVAQGPGPAPG----VGSAPPASSSAPPATPPTSGAPP 143

Query: 295 RPGCSFPTSKPSEAATS 311
             G   PT  P  A TS
Sbjct: 144 GSGPG-PTPTPPPAVTS 159


>gi|14249119 Rhox homeobox family, member 2 [Homo sapiens]
          Length = 288

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240
           VPG  L +GD +G +G   S G+ E ++ S+ K+PG Q   P  A    +PG   Q    
Sbjct: 85  VPGH-LWEGDLEGTSG---SDGNVEDSDQSE-KEPGQQYSRPQGAVGGLEPGNAQQPNVH 139

Query: 241 QWTP 244
            +TP
Sbjct: 140 AFTP 143


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 35.0 bits (79), Expect = 0.091
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 14/137 (10%)

Query: 195 TGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQG----AAAQWTPKGPLRR 250
           T   P+ G  E+A  ++   PGP    P RA+    PG +GQ     +A +   +G    
Sbjct: 82  TSRPPASGRGERAPPAKNTSPGPVSS-PGRASGTTRPGPLGQKGLRISAEETVARGKATE 140

Query: 251 L--RLPRCKWTQGSGSFSSPGN------HRFLGSNSPNGVPRALPSSSHRPCRPGCSFPT 302
              R       +   S  +PG        R   + +  G+PR  PS+  RP   G     
Sbjct: 141 APKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSV 200

Query: 303 SKPSEAATSIYSSPSGR 319
           S  SE +T+   SP+ R
Sbjct: 201 SSASEHSTT-EPSPAAR 216



 Score = 28.5 bits (62), Expect = 8.6
 Identities = 39/145 (26%), Positives = 55/145 (37%), Gaps = 17/145 (11%)

Query: 196 GCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGP-------- 247
           G   +P HP Q +    +   P Q  P R  A    G +     A  +P  P        
Sbjct: 252 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPS 311

Query: 248 LRRL----RLPRCKWTQGSGSFSSPGNHRFLGSN--SPNGV--PRALPSSSHRPCRPGCS 299
           L+ L      P  + T   GS +    H FL S   SP     P+A P+ +  P +   S
Sbjct: 312 LQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPS 371

Query: 300 FPTSKP-SEAATSIYSSPSGRSIRL 323
            P S P S  AT    +P+  ++ L
Sbjct: 372 PPASPPLSPLATPSPQAPNALAVHL 396


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 35.0 bits (79), Expect = 0.091
 Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240
           VPG G   G   G    S      E   + +   P P+Q   +    +       QG A 
Sbjct: 60  VPGPGPGPGPGPGPGSTSRRLDPKEPLGNQRAASPTPKQASATTPGHESPRETRAQGPAG 119

Query: 241 QWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGC-- 298
           Q    GP R L++     TQ SG   S    R     SP  VP+  P  S   C P C  
Sbjct: 120 Q-EADGPRRTLQVD--SRTQRSGRSPSVSPDRGSTPTSPYSVPQIAPLPSSTLC-PICKT 175

Query: 299 SFPTSKPSE 307
           S  TS PS+
Sbjct: 176 SDLTSTPSQ 184


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 39/128 (30%), Positives = 44/128 (34%), Gaps = 13/128 (10%)

Query: 182 PGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQ 241
           PG     GD  G+ G   SPG P      +    GPQ   P   + D   G    G A  
Sbjct: 114 PGIPGRNGDP-GIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGY 172

Query: 242 WTPKGPLRRLRLPRCKWTQGS----GSFSSPGNHRFLGSNSPNGVPRALPSS-------- 289
             P GP      P      GS    G    PG     G + P G P A+  S        
Sbjct: 173 PGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGE 232

Query: 290 SHRPCRPG 297
           S RP RPG
Sbjct: 233 SGRPGRPG 240


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 14/133 (10%)

Query: 199 PSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQG----AAAQWTPKGPLRRL--R 252
           P+ G  E+A  ++   PGP    P RA+    PG +GQ     +A +   +G       R
Sbjct: 95  PASGRGERAPPAKNTSPGPVSS-PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153

Query: 253 LPRCKWTQGSGSFSSPGN------HRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKPS 306
                  +   S  +PG        R   + +  G+PR  PS+  RP   G     S  S
Sbjct: 154 SALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS 213

Query: 307 EAATSIYSSPSGR 319
           E +T+   SP+ R
Sbjct: 214 EHSTT-EPSPAAR 225



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 31/122 (25%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 196 GCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGPLRRLRLPR 255
           G   +P HP Q +    +   P Q  P R  A    G +     A  +P   L+    P 
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT 320

Query: 256 CKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKPSEAATSIYSS 315
              T  S S         L       +P A PS S  P       P + P   AT+   S
Sbjct: 321 LPATPHSSS---------LTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 371

Query: 316 PS 317
           P+
Sbjct: 372 PT 373


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 14/133 (10%)

Query: 199 PSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQG----AAAQWTPKGPLRRL--R 252
           P+ G  E+A  ++   PGP    P RA+    PG +GQ     +A +   +G       R
Sbjct: 95  PASGRGERAPPAKNTSPGPVSS-PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153

Query: 253 LPRCKWTQGSGSFSSPGN------HRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKPS 306
                  +   S  +PG        R   + +  G+PR  PS+  RP   G     S  S
Sbjct: 154 SALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS 213

Query: 307 EAATSIYSSPSGR 319
           E +T+   SP+ R
Sbjct: 214 EHSTT-EPSPAAR 225



 Score = 32.0 bits (71), Expect = 0.77
 Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 22/131 (16%)

Query: 199 PSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTP-------------K 245
           PSP  P   ++     P P    PS+A        M    + Q  P             +
Sbjct: 346 PSPSAPPSLQTL----PSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401

Query: 246 GPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTSKP 305
            P   L L   + T   GS +    H FL  +     PR   +S   P RP  + P S P
Sbjct: 402 APPSPLALSSLQATTSLGSPTLQATHSFLTMS-----PRQTQASLTSPSRPASTPPDSPP 456

Query: 306 SEAATSIYSSP 316
            +A  S+ +SP
Sbjct: 457 LQAPLSLPASP 467


>gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
          Length = 414

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 44/176 (25%), Positives = 65/176 (36%), Gaps = 17/176 (9%)

Query: 161 DGQDGVGLSAVVQVVGHLSHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQ 220
           DG+  +    VV  +G++     +       D L    P P     +E  Q K+ G  + 
Sbjct: 168 DGKQHLRSLPVVNSIGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMES 227

Query: 221 HPSRAAADHDPGRMGQG------AAAQWTPKGPLRRLRLPRCKWTQGSGSFSSPGNHRFL 274
             +    ++    +G        +A+ +  +G L       CK  Q SG      +H   
Sbjct: 228 VKTVTTEEYLVNPVGMNRYSVDTSASTFNHRGSLHPSSSLYCK-RQNSGD-----SHLGG 281

Query: 275 GSNSPNGVPRALPSSSHRPCRPGCSFPTSKPSEAATSI-----YSSPSGRSIRLRR 325
           G  +  G PR  P SS  P  PG   P S P    TS+      SSPS  +   RR
Sbjct: 282 GPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARR 337


>gi|36796743 methylenetetrahydrofolate dehydrogenase (NADP+
           dependent) 1-like [Homo sapiens]
          Length = 978

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 244 PKGPLRRLRLPRCKWTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHRPCRPGCSFPTS 303
           P GP RRLR+P C+ + G G     G    LG   P          +   C PG   P +
Sbjct: 18  PPGPPRRLRVP-CRASSGGGGGGGGGREGLLGQRRPQ------DGQARSSCSPGGRTPAA 70

Query: 304 KPSEAATSIYSS 315
           + S     I +S
Sbjct: 71  RDSIVREVIQNS 82


>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
          Length = 1484

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 25/133 (18%)

Query: 199  PSPG-HPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGPLRRLRLPRCK 257
            PSP    EQ+ SS   Q GPQ    S + +               TP+ P R  RL R +
Sbjct: 1017 PSPAAREEQSRSSASSQKGPQALTRSNSLS---------------TPR-PTRASRLRRAR 1060

Query: 258  WTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSS-------HRPCRPGCSFPTSKPSEAAT 310
                S + ++ G    LG+  P G P A  +           P +   SF  +   EAA 
Sbjct: 1061 LGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAP 1120

Query: 311  SIYSSPSGRSIRL 323
            +  +S SGRS+ L
Sbjct: 1121 A-RTSFSGRSVEL 1132


>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapiens]
          Length = 1554

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 25/133 (18%)

Query: 199  PSPG-HPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTPKGPLRRLRLPRCK 257
            PSP    EQ+ SS   Q GPQ    S + +               TP+ P R  RL R +
Sbjct: 1087 PSPAAREEQSRSSASSQKGPQALTRSNSLS---------------TPR-PTRASRLRRAR 1130

Query: 258  WTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSS-------HRPCRPGCSFPTSKPSEAAT 310
                S + ++ G    LG+  P G P A  +           P +   SF  +   EAA 
Sbjct: 1131 LGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAP 1190

Query: 311  SIYSSPSGRSIRL 323
            +  +S SGRS+ L
Sbjct: 1191 A-RTSFSGRSVEL 1202


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 179 SHVPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGA 238
           S +P     +G A   T   P PG           + GP+++  +R  A+ +PG+  Q +
Sbjct: 499 SSIPASKPRRGTAPTRTAAPPWPG-------GVSVRTGPEKRSSTRPPAEMEPGKGEQAS 551

Query: 239 AAQWTPKGPL 248
           +++  P+GP+
Sbjct: 552 SSESDPEGPI 561


>gi|153791494 Rhox homeobox family, member 2B [Homo sapiens]
          Length = 288

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 181 VPGQGLAQGDADGLTGCSPSPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAA 240
           VPG  L +G+ +G +G   S G+ E ++ S+ K+PG Q   P  A    +PG   Q    
Sbjct: 85  VPGH-LWEGNLEGTSG---SDGNVEDSDQSE-KEPGQQYSRPQGAVGGLEPGNAQQPNVH 139

Query: 241 QWTP 244
            +TP
Sbjct: 140 AFTP 143


>gi|11761629 fibrinogen, alpha polypeptide isoform alpha
           preproprotein [Homo sapiens]
          Length = 644

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 14/95 (14%)

Query: 200 SPGHPEQAESSQGKQPGPQQQHPSRAAADHDPGRMGQGAAAQWTP--KGPLRRLRLPRCK 257
           SP +P  A S      GP       +  + +PG  G G  A W P   GP          
Sbjct: 285 SPRNPSSAGSWNSGSSGPG------STGNRNPGSSGTGGTATWKPGSSGP-----GSTGS 333

Query: 258 WTQGSGSFSSPGNHRFLGSNSPNGVPRALPSSSHR 292
           W  GS    S GN    GS  P       P SS R
Sbjct: 334 WNSGSSGTGSTGNQN-PGSPRPGSTGTWNPGSSER 367


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.132    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,036,694
Number of Sequences: 37866
Number of extensions: 843477
Number of successful extensions: 3393
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 3206
Number of HSP's gapped (non-prelim): 389
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.