Search of human proteins with 239751921

Search of human proteins with 239751921

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751921 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757363 PREDICTED: hypothetical protein isoform 1 [Homo sap...   343   5e-95
gi|239751921 PREDICTED: hypothetical protein isoform 1 [Homo sap...   343   5e-95
gi|239746411 PREDICTED: hypothetical protein XP_002343707 isofor...   343   5e-95
gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]           45   2e-05
gi|239745314 PREDICTED: similar to hCG1803335 [Homo sapiens]           43   1e-04
gi|60097902 filaggrin [Homo sapiens]                                   37   0.008
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ...    37   0.008
gi|66529407 tensin [Homo sapiens]                                      36   0.014
gi|109638751 ubiquitin specific protease 6 [Homo sapiens]              36   0.018
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         36   0.018
gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]            35   0.024
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       35   0.024
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    35   0.024
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    35   0.024
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    35   0.024
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    35   0.024
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        35   0.024
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    35   0.040
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]            35   0.040
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]            35   0.040
gi|55741655 anoctamin 8 [Homo sapiens]                                 34   0.052
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         34   0.052
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]           34   0.052
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           34   0.052
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    34   0.068
gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]        34   0.068
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]            33   0.089
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]            33   0.089
gi|195947369 junction-mediating and regulatory protein [Homo sap...    33   0.089
gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]       33   0.089

>gi|239757363 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 169

 Score =  343 bits (879), Expect = 5e-95
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL 60
           MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL
Sbjct: 1   MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL 60

Query: 61  IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120
           IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS
Sbjct: 61  IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120

Query: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169
           TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP
Sbjct: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169


>gi|239751921 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 169

 Score =  343 bits (879), Expect = 5e-95
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL 60
           MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL
Sbjct: 1   MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL 60

Query: 61  IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120
           IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS
Sbjct: 61  IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120

Query: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169
           TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP
Sbjct: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169


>gi|239746411 PREDICTED: hypothetical protein XP_002343707 isoform 1
           [Homo sapiens]
          Length = 169

 Score =  343 bits (879), Expect = 5e-95
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL 60
           MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL
Sbjct: 1   MFSACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPL 60

Query: 61  IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120
           IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS
Sbjct: 61  IFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120

Query: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169
           TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP
Sbjct: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169


>gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]
          Length = 246

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 37/191 (19%)

Query: 3   SACSLGRISSRLSRSSP-------------KVTEPAPGPVHTKSALPGCARARRSKASTK 49
           S C   R+SSR + S P             + TE  PGP   +S   G   + R+  S  
Sbjct: 55  SQCQGHRVSSRATESVPGPQSQFQGHRVSARATESVPGP---QSQCQGHRVSSRATESVP 111

Query: 50  VSGGCRLKHPLIFR-------PRWRILAKKITSAGSQRSPG--GSRAGRRVSARAAAARL 100
                R  H +  R       P+ +    ++++  ++  PG    R G RVS+RA  +  
Sbjct: 112 GPQSQRQGHRVSARATESAPGPQSQCQGHRVSARATESVPGPQSQRQGHRVSSRATESAP 171

Query: 101 SPWGTQGPSQGRANMASPSSTQHVGSPRSQR---RVKATATGHTGCPRPQSRSSSSSSKA 157
            P      SQ + +  S  +T+ V  P+SQR   RV + AT     P+ Q +    S++A
Sbjct: 172 GP-----QSQFQGHRVSARATESVPGPQSQRQGHRVSSRATESVPGPQSQFQGHRVSARA 226

Query: 158 NCCLTPMVPAP 168
               T  VP P
Sbjct: 227 ----TESVPGP 233


>gi|239745314 PREDICTED: similar to hCG1803335 [Homo sapiens]
          Length = 238

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 37/171 (21%)

Query: 3   SACSLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIF 62
           S C   R+SSR        TE  PGP          ARA  S     V G          
Sbjct: 55  SQCQGHRVSSR-------ATESVPGPQSQFQGHRVSARATES-----VPG---------- 92

Query: 63  RPRWRILAKKITSAGSQRSPG--GSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSS 120
            P+ +    +++S  ++  PG    R G RVS+RA  +   P      SQ + +  S  +
Sbjct: 93  -PQSQCQGHRVSSRATESVPGPQSQRQGHRVSSRATESAPGP-----QSQFQGHRVSARA 146

Query: 121 TQHVGSPRSQR---RVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAP 168
           T+ V  P+SQR   RV + AT     P+ Q +    S++A    T  VP P
Sbjct: 147 TESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARA----TESVPGP 193



 Score = 36.6 bits (83), Expect = 0.011
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 14/110 (12%)

Query: 64  PRWRILAKKITSAGSQRSPGGSRA--GRRVSARAAAARLSPWGTQGPSQGRANMASPSST 121
           P+ +    +++S  ++  PG      G RVSARA  +   P      SQ + +  S  +T
Sbjct: 53  PQSQCQGHRVSSRATESVPGPQSQFQGHRVSARATESVPGP-----QSQCQGHRVSSRAT 107

Query: 122 QHVGSPRSQR---RVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAP 168
           + V  P+SQR   RV + AT     P+ Q +    S++A    T  VP P
Sbjct: 108 ESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARA----TESVPGP 153


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 41/152 (26%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 6    SLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCA-RARRSKASTKVSGGCRLKHPLIFRP 64
            S G  +SR   SS      + G         G A R  R  A  +   G R  HP   R 
Sbjct: 933  SEGSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSAQEQSRHGSR--HP---RS 987

Query: 65   RWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHV 124
                 A    SA S R  G   A      +AA++      + G   G  +  S  S++H 
Sbjct: 988  HHEDRAGHGHSADSSRQSGTPHAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHS 1047

Query: 125  GSPRSQRRVKATATGHTGCPRPQSRSSSSSSK 156
            G PR Q       +GH G    Q+  S   S+
Sbjct: 1048 GIPRRQASSAVRDSGHWGSSGSQASDSEGHSE 1079



 Score = 32.0 bits (71), Expect = 0.26
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 4/147 (2%)

Query: 11   SSRLSRSSPKVTEPAPGPVHTKSALPGCARARRS-KASTKVSGGCRLKHPLIFRPRWRIL 69
            S R  R    V++ +    H++ +      A R+ + S +       +HP   R      
Sbjct: 3205 SRRSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSVQEQSRHGSRHP---RSHHEDR 3261

Query: 70   AKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRS 129
            A    SA   R  G   A      +AA++      + G   G  +  S  S++H G PR 
Sbjct: 3262 AGHGHSADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRG 3321

Query: 130  QRRVKATATGHTGCPRPQSRSSSSSSK 156
            Q       + H G    Q+  S   S+
Sbjct: 3322 QASSAVRDSRHWGSSGSQASDSEGHSE 3348



 Score = 31.2 bits (69), Expect = 0.44
 Identities = 21/82 (25%), Positives = 31/82 (37%)

Query: 75   SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVK 134
            SA S R  G   A      +AA++      + G   G  +  S  S++H G    Q    
Sbjct: 2295 SAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGIGHGQASSA 2354

Query: 135  ATATGHTGCPRPQSRSSSSSSK 156
               +GH G    Q+  S   S+
Sbjct: 2355 VRDSGHRGSSGSQASDSEGHSE 2376



 Score = 31.2 bits (69), Expect = 0.44
 Identities = 21/82 (25%), Positives = 31/82 (37%)

Query: 75   SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVK 134
            SA S R  G   A      +AA++      + G   G  +  S  S++H G    Q    
Sbjct: 3591 SAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGIGHGQASSA 3650

Query: 135  ATATGHTGCPRPQSRSSSSSSK 156
               +GH G    Q+  S   S+
Sbjct: 3651 VRDSGHRGSSGSQASDSEGHSE 3672



 Score = 30.8 bits (68), Expect = 0.58
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 75  SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQG-RANMASPSSTQHVGSPRSQRRV 133
           SA S R  G        S +AA++      + G   G R  + S  S++H G+   Q   
Sbjct: 673 SADSSRKSGTRHTQNSSSGQAASSHEQARSSAGERHGSRHQLQSADSSRHSGTGHGQASS 732

Query: 134 KATATGHTGCPRPQSRSSSSSSK 156
               +GH G    Q+  S   S+
Sbjct: 733 AVRDSGHRGSSGSQATDSEGHSE 755



 Score = 30.4 bits (67), Expect = 0.76
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 70   AKKITSAGSQRSPGGSRAGRR---VSARAAAARLSPWGTQGPSQG------RANMASPSS 120
            A + T    Q   G   +G R    S RA ++R S  G QG S G      + +  S   
Sbjct: 1540 ASRQTRNEEQSGDGSRHSGSRHHEPSTRAGSSRHSQVG-QGESAGSKTSRRQGSSVSQDR 1598

Query: 121  TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKAN 158
                 S  S+RR ++ +  H G  R QSR  S + +++
Sbjct: 1599 DSEGHSEDSERRSESASRNHYGSAREQSRHGSRNPRSH 1636



 Score = 28.9 bits (63), Expect = 2.2
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 70   AKKITSAGSQRSPGGSRAGRR---VSARAAAARLSPWGTQGPSQG------RANMASPSS 120
            A + T    Q   G   +G R    S +A ++R S  G QG S G      + +  S  S
Sbjct: 3809 ASRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSG-QGESAGSRRSRRQGSSVSQDS 3867

Query: 121  TQHVGSPRSQRRVKATATGHTGCPRPQSRSSS 152
                    S+RR ++ +  H G  R QSR  S
Sbjct: 3868 DSEAYPEDSERRSESASRNHHGSSREQSRDGS 3899



 Score = 28.5 bits (62), Expect = 2.9
 Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 8/149 (5%)

Query: 11   SSRLSRSSPKVTEPAPGPVHTKSALPGCARARRS---KASTKVSGGCRLKHPLIFRPRWR 67
            S R  R    V++ +    H++ +      A R+    A  ++  G R  HP   R    
Sbjct: 2881 SRRSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHHGSAQEQLRDGSR--HP---RSHQE 2935

Query: 68   ILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSP 127
              A    SA S R  G          +AA++      + G   G  +  S  S++H G  
Sbjct: 2936 DRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGIG 2995

Query: 128  RSQRRVKATATGHTGCPRPQSRSSSSSSK 156
              Q       +GH G    Q+  +   S+
Sbjct: 2996 HGQASSAVRDSGHRGYSGSQASDNEGHSE 3024



 Score = 28.1 bits (61), Expect = 3.8
 Identities = 19/82 (23%), Positives = 30/82 (36%)

Query: 75   SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVK 134
            SA S R  G          +AA++      + G   G  +  S  S++H G    Q    
Sbjct: 2619 SADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGIGHGQASSA 2678

Query: 135  ATATGHTGCPRPQSRSSSSSSK 156
               +GH G    Q+  +   S+
Sbjct: 2679 VRDSGHRGYSGSQASDNEGHSE 2700



 Score = 26.9 bits (58), Expect = 8.4
 Identities = 19/82 (23%), Positives = 29/82 (35%)

Query: 75   SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVK 134
            SA S R  G          +A ++      + G   G  +  S  S++H G    Q    
Sbjct: 1322 SADSSRQSGTHHTESSSHGQAVSSHEQARSSPGERHGSRHQQSADSSRHSGIGHRQASSA 1381

Query: 135  ATATGHTGCPRPQSRSSSSSSK 156
               +GH G    Q  +S   S+
Sbjct: 1382 VRDSGHRGSSGSQVTNSEGHSE 1403


>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
           sapiens]
          Length = 337

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 75  SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRA--NMASPSSTQHVGSPRSQRR 132
           +A  +RSPG  R G+    R +  R +PW       GRA   +   S     G  +  +R
Sbjct: 88  AAAQERSPGRRRLGKEPLIRESWTRSAPWRCLSQDAGRAGSQVCGSSPQTRGGGGKKLQR 147

Query: 133 VKATATGHTGCPRPQ 147
            KAT  G     +PQ
Sbjct: 148 QKATVMGAKSRKKPQ 162


>gi|66529407 tensin [Homo sapiens]
          Length = 1735

 Score = 36.2 bits (82), Expect = 0.014
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 15/129 (11%)

Query: 25  APGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWRILAKKITSAGSQRSPGG 84
           A  P+H   ++PG        +S  +SG  R  HPL             T + S   P G
Sbjct: 724 AAAPLHKSQSVPGAWPGASPLSSQPLSGSSRQSHPL-------------TQSRSGYIPSG 770

Query: 85  SRAGRRVSA-RAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVKATATGHTGC 143
              G    A RA+   + P  +  P   +  +A P+   H  SP S        T H+  
Sbjct: 771 HSLGTPEPAPRASLESVPPGRSYSPYDYQPCLAGPNQDFHSKSPASSSLPAFLPTTHSP- 829

Query: 144 PRPQSRSSS 152
           P PQ   +S
Sbjct: 830 PGPQQPPAS 838


>gi|109638751 ubiquitin specific protease 6 [Homo sapiens]
          Length = 1406

 Score = 35.8 bits (81), Expect = 0.018
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 67   RILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGS 126
            RILA+++    +Q S G        S  + +A +S      PS  R +  S  S+++  S
Sbjct: 1134 RILAREVKKVDAQSSAGKEDMLLSKSPSSLSANISSSPKGSPSSSRKSGTSCPSSKN-SS 1192

Query: 127  PRSQRRVKATATGHTGCPRPQSRSSSSSSKAN 158
            P S  R    + G    P+  S++  SSSK N
Sbjct: 1193 PNSSPRTLGRSKGRLRLPQIGSKNKPSSSKKN 1224


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 35.8 bits (81), Expect = 0.018
 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 21/167 (12%)

Query: 16  RSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWRILAKKITS 75
           R   K  E   G    +S  P   +A   K     +G  ++K    ++  WR        
Sbjct: 470 RDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGP-QVKRADEWKDPWRRSKSPKKK 528

Query: 76  AGSQRSPGGSRAGRRVSARAAAA--------RLSPWGTQGPSQGRANMASPS-----STQ 122
            G   SP  +R  R+ SA +A+A        R S +   G S+ R+  +S S     S++
Sbjct: 529 LGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSR 588

Query: 123 HVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169
           H     S+ R ++ ++  +  P P     S  +K         PAPP
Sbjct: 589 HSSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGE-------PAPP 628


>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 31  TKSALP-GCARARRSKASTKVSGGCRLK--HPLIFRPRW-RILAKKITSAGSQRSPGGSR 86
           T++  P GC +ARRS       GG R     P+     W  + +  I  AG  +  GGS+
Sbjct: 36  TRARCPCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQ 95

Query: 87  AGRRVSARAAAARLSPWGTQGPSQ------GRANMASPSSTQHVGSPRSQRRVKATATGH 140
           A       AA A L+ W      Q      G  ++A P     V + +    +    TG 
Sbjct: 96  ARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGA 155

Query: 141 TGCPRPQSR 149
              P+P  R
Sbjct: 156 GTDPQPHPR 164


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 11  SSRLSRSSPKVTEPAPGPVHTKSALPGCARARR-----SKASTKVSGGCRLKHPLI 61
           S R  R  P+ + PAP P    SALP   RA R     S+A    + GCRL+  L+
Sbjct: 92  SGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLV 147


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 11  SSRLSRSSPKVTEPAPGPVHTKSALPGCARARR-----SKASTKVSGGCRLKHPLI 61
           S R  R  P+ + PAP P    SALP   RA R     S+A    + GCRL+  L+
Sbjct: 75  SGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLV 130


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 11  SSRLSRSSPKVTEPAPGPVHTKSALPGCARARR-----SKASTKVSGGCRLKHPLI 61
           S R  R  P+ + PAP P    SALP   RA R     S+A    + GCRL+  L+
Sbjct: 83  SGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLV 138


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 11  SSRLSRSSPKVTEPAPGPVHTKSALPGCARARR-----SKASTKVSGGCRLKHPLI 61
           S R  R  P+ + PAP P    SALP   RA R     S+A    + GCRL+  L+
Sbjct: 75  SGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLV 130


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 11  SSRLSRSSPKVTEPAPGPVHTKSALPGCARARR-----SKASTKVSGGCRLKHPLI 61
           S R  R  P+ + PAP P    SALP   RA R     S+A    + GCRL+  L+
Sbjct: 83  SGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLV 138


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 9/159 (5%)

Query: 16   RSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWRILAKKITS 75
            R SP V+ P P      S     A + R+K +++       K   + R R R   +K  +
Sbjct: 1725 RRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRT 1784

Query: 76   ------AGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVG---S 126
                  +GS +S    R   R  +R    R    G    S  R   +  SS +  G   +
Sbjct: 1785 TRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRT 1844

Query: 127  PRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMV 165
            P + R+   + T      R +SR+S ++ + +   TP++
Sbjct: 1845 PPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLI 1883



 Score = 32.7 bits (73), Expect = 0.15
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 14/150 (9%)

Query: 12  SRLSRSSPKVTEPAPGP---------VHTKSALPGCARARRSKASTKVSGGCRLKHPLIF 62
           SR + SSP+  +PAP P           +K+   G A+  +S + T      R + P   
Sbjct: 431 SRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATA 490

Query: 63  RPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQ 122
           + R R  ++  T  G  RS        R + R   +R      +  S  R   +   +TQ
Sbjct: 491 K-RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQ 549

Query: 123 HVGSPRSQRRVKATATGHTGCPRPQSRSSS 152
             G  RS RR ++    H+  P  + RS S
Sbjct: 550 RRGRSRSARRGRS----HSRSPATRGRSRS 575



 Score = 30.0 bits (66), Expect = 0.99
 Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 3/145 (2%)

Query: 9    RISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWRI 68
            R SSR  R   + T P           P   +  RS+AS       R + PLI R R R 
Sbjct: 1832 RTSSRRRRGRSR-TPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRS 1890

Query: 69   LAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGS-- 126
                ++   S+     +R   R  A   + R S   T   ++ R+   +P++ +   S  
Sbjct: 1891 RTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRT 1950

Query: 127  PRSQRRVKATATGHTGCPRPQSRSS 151
            P   RR   + T      R +SR+S
Sbjct: 1951 PPVTRRRSRSRTPPVTRRRSRSRTS 1975



 Score = 29.6 bits (65), Expect = 1.3
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 15/89 (16%)

Query: 78   SQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSP---RSQRRVK 134
            S+RS  GS  G R             G+  PS+   + +SP       +P   RS+    
Sbjct: 1436 SRRSRSGSSPGLRD------------GSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSS 1483

Query: 135  ATATGHTGCPRPQSRSSSSSSKANCCLTP 163
                     PRP+SRS SS    N CLTP
Sbjct: 1484 PEPKALPQTPRPRSRSPSSPELNNKCLTP 1512



 Score = 28.9 bits (63), Expect = 2.2
 Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 4/123 (3%)

Query: 6    SLGRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPR 65
            S  R S    R S   T P           P   R  RS+    +    R + PL+ R R
Sbjct: 1982 SRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKR 2041

Query: 66   WRILAK-KITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSST-QH 123
             R  +   I      R+P  +R  R ++    A R       G S  R+  A+P +T  H
Sbjct: 2042 SRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRR--SASGSSSDRSRSATPPATRNH 2099

Query: 124  VGS 126
             GS
Sbjct: 2100 SGS 2102



 Score = 28.1 bits (61), Expect = 3.8
 Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 28/167 (16%)

Query: 7    LGRISSRLSRSSPK----VTEPAPGP------VHTKSALPGCARARRSKASTKVSGGCRL 56
            L R  SR   S+P      +E AP P        ++S LP      RS   +  S   R 
Sbjct: 2402 LDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRC 2461

Query: 57   KHPLIFRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLS------PWGTQGPSQ 110
                       ++A+    AGSQ    G+ A    SA      LS      P    G   
Sbjct: 2462 -----------LIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPP 2510

Query: 111  GRANMASPSSTQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKA 157
                   PS+   +  P  +RR  ++++  +      S SSSSSS +
Sbjct: 2511 ASTGAQQPSALAAL-QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSS 2556


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 14  LSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWRILAKKI 73
           L   S +  +P P  +   +   G       + S +   G R  H L+  P  R+  K+ 
Sbjct: 518 LEPESDRSAQPLPLKIEELALAKGITEECLKQPSLEQKEGRRASHTLL--PSHRL--KQS 573

Query: 74  TSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRV 133
             + S RS   S +  R  +R+  +     G++  S  R+     +  +   +PR + ++
Sbjct: 574 ADSSSSRSSSSSSSSSRSRSRSPDSS----GSRSHSPLRSKQRDVAQARTHANPRGRPKM 629

Query: 134 KATATGHTGCPRPQSRSSSSSSKANCCLTPMV 165
            + +T  +   R +SRS S+SS +   L+P V
Sbjct: 630 GSRSTSESR-SRSRSRSRSASSNSRKSLSPGV 660



 Score = 30.8 bits (68), Expect = 0.58
 Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)

Query: 8   GRISSRLSRSSPKVTEPAPGPVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWR 67
           GR +S     S ++ + A       S+    + + RS++ +  S G R   PL  R + R
Sbjct: 557 GRRASHTLLPSHRLKQSADSSSSRSSS--SSSSSSRSRSRSPDSSGSRSHSPL--RSKQR 612

Query: 68  ILAKKITSAGSQ-------RSPGGSRAGRRVSARAAAAR----LSPWGTQGPSQGRANMA 116
            +A+  T A  +       RS   SR+  R  +R+A++     LSP  ++  S       
Sbjct: 613 DVAQARTHANPRGRPKMGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDSSTSYTETK 672

Query: 117 SPSSTQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSS 155
            PSS Q V +P                  P+ R+S+SSS
Sbjct: 673 DPSSGQEVATP---------PVPQLQVCEPKERTSTSSS 702


>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 292

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 44/156 (28%), Positives = 56/156 (35%), Gaps = 32/156 (20%)

Query: 18  SPKVTEPAPGPVHTKSALPG-------CARARRSKAS-TKVSGGCRLKHPLI-FRPRWRI 68
           +P + EP PG +   +A PG       C  AR      +   G CR+  P      RWR 
Sbjct: 72  APSIAEPGPG-IPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWR- 129

Query: 69  LAKKITSAGSQRSPGGSRAGRRVSARA-AAARLSP-WG----------TQGPSQGRANMA 116
                  +G +  PGG +AGR    +A  A  L P W            Q P   RA   
Sbjct: 130 -------SGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPH 182

Query: 117 SPSSTQHVGSP--RSQRRVKATATGHTGCPRPQSRS 150
           SP        P    + R  A    H G  RP + S
Sbjct: 183 SPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPS 218


>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 47/155 (30%), Positives = 56/155 (36%), Gaps = 30/155 (19%)

Query: 18  SPKVTEPAPG-PVHTKSA--LPG---CARARRSKAS-TKVSGGCRLKHPLI-FRPRWRIL 69
           SP + EP PG PV       LPG   C  AR      +   G CR+  P      RWR  
Sbjct: 92  SPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWR-- 149

Query: 70  AKKITSAGSQRSPGGSRAGRRVSARA-AAARLSP-WG----------TQGPSQGRANMAS 117
                 +G +  PGG +AGR    +A  A  L P W            Q P   RA   S
Sbjct: 150 ------SGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHS 203

Query: 118 PSSTQHVGSP--RSQRRVKATATGHTGCPRPQSRS 150
           P        P    + R  A    H G  RP + S
Sbjct: 204 PHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPS 238


>gi|55741655 anoctamin 8 [Homo sapiens]
          Length = 1232

 Score = 34.3 bits (77), Expect = 0.052
 Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 18/169 (10%)

Query: 6    SLGRISSRLSRSSPKVTEPAPG--PVHTKSALPGCARARRSKASTKVSGGCRLKHPLIFR 63
            S G  SS  +  +   T P P   P  + + LP     +  K+        R   P    
Sbjct: 990  SSGATSSLAAAGAGATTRPPPAQSPTGSDTRLPAFLSFKFLKSPETRRDSERSHSP---- 1045

Query: 64   PRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASP---SS 120
            P+     K     G++  PG + AG          +  P GT      R   + P   + 
Sbjct: 1046 PKAFHAGKLFPFGGTRAEPGSNGAG---------GQARPDGTPSSGSSRVQRSGPVDEAL 1096

Query: 121  TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSSKANCCLTPMVPAPP 169
             + + +PR +     TA    G P  ++R S S +       P  P PP
Sbjct: 1097 AEELEAPRPEEEGSGTALAPVGAPALRTRRSRSPAPPPPMPLPRPPTPP 1145


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 34.3 bits (77), Expect = 0.052
 Identities = 22/86 (25%), Positives = 38/86 (44%)

Query: 77   GSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVKAT 136
            G +   GG   G R  + A++   SP  +   S   ++ +S SS+    S  S     ++
Sbjct: 2587 GDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2646

Query: 137  ATGHTGCPRPQSRSSSSSSKANCCLT 162
            ++  +      S SSSSSS ++   T
Sbjct: 2647 SSSSSSSSSSSSSSSSSSSSSSSSST 2672


>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
          Length = 330

 Score = 34.3 bits (77), Expect = 0.052
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 65  RWRILAKKITSAGSQRSPGGSRAGRRVS-ARAAAARLSPWGTQGPSQGRANMASPSSTQH 123
           ++ + A +   +  ++S   SR+  R S +R+++   SP  ++  S+ R+  +S S ++ 
Sbjct: 182 KYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRS 241

Query: 124 VGSPRSQRRVK-----ATATGHTGCPRPQSRSSSSSSKA 157
             S R + R +     +++  H G   P+ RS SSSS +
Sbjct: 242 RSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSS 280



 Score = 33.5 bits (75), Expect = 0.089
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 63  RPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPW--GTQGPSQGRANMASPSS 120
           R R +  +    S+    SP  SR+  R  +R++++  S     ++  S+ R + +  SS
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSS 260

Query: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSS 155
             H GS   ++R  ++++      R +SRS SSSS
Sbjct: 261 RSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSS 295


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 34.3 bits (77), Expect = 0.052
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 65  RWRILAKKITSAGSQRSPGGSRAGRRVS-ARAAAARLSPWGTQGPSQGRANMASPSSTQH 123
           ++ + A +   +  ++S   SR+  R S +R+++   SP  ++  S+ R+  +S S ++ 
Sbjct: 182 KYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRS 241

Query: 124 VGSPRSQRRVK-----ATATGHTGCPRPQSRSSSSSSKA 157
             S R + R +     +++  H G   P+ RS SSSS +
Sbjct: 242 RSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSS 280



 Score = 33.5 bits (75), Expect = 0.089
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 63  RPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPW--GTQGPSQGRANMASPSS 120
           R R +  +    S+    SP  SR+  R  +R++++  S     ++  S+ R + +  SS
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSS 260

Query: 121 TQHVGSPRSQRRVKATATGHTGCPRPQSRSSSSSS 155
             H GS   ++R  ++++      R +SRS SSSS
Sbjct: 261 RSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSS 295


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 33.9 bits (76), Expect = 0.068
 Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 5/125 (4%)

Query: 31  TKSALPGCARARRSKASTKVSGGCRLKHPLIFRPRWRILAKKITSAGSQRSPGGSRAGRR 90
           T SA  G AR    +   + SG  R +     +   R  A +     S+R    + AGR 
Sbjct: 798 TDSARGGRARLTAGRRVRRESG--RRRAGATSQGAIRRAASRARKGESRRPLPANSAGRP 855

Query: 91  VSARAAAARLS--PWGTQGPSQGRANMASPSSTQHVGSPRSQRRVKATATGHTGCPRPQS 148
                AAAR +   WG +     RA    P + Q   +PR +RR+  +  G  G      
Sbjct: 856 ALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVG-PGRAHSAG 914

Query: 149 RSSSS 153
           RSS S
Sbjct: 915 RSSYS 919


>gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
          Length = 1538

 Score = 33.9 bits (76), Expect = 0.068
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 23/151 (15%)

Query: 3   SACSLGRISSRLSRSSPKVTEPAPGPVHT-KSALPGCARARRSKASTKVSGGCRLKHPLI 61
           S  SLGRI +R  +SS   T  A  P +  +S     ++++RS+++     G R   P  
Sbjct: 633 SYASLGRIRTR-RQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP-- 689

Query: 62  FRPRWRILAKKITSAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSST 121
                     K+  +G     GGS  G  V+  +      P      SQG +   SP+  
Sbjct: 690 ---------GKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP-----RSQGCSRETSPN-- 733

Query: 122 QHVGSPRSQRRVKATATGHTGCPRPQSRSSS 152
             +G  RS R  + + +   GC R  SR SS
Sbjct: 734 -RIGLARSSRIPRPSMS--QGCSRDTSRESS 761



 Score = 27.3 bits (59), Expect = 6.4
 Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 13/144 (9%)

Query: 16  RSSPKVTEPAPGPVHTKSALPGCARARRSKASTK-VSGGCRLKHPLIFRPRWRILAKKIT 74
           RSS    E    P+  K +  G   +R S  STK VS    L+     R R  I    + 
Sbjct: 554 RSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQ-----RSRSDI---DVN 605

Query: 75  SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGPSQGRANMASPSSTQHVGSPRSQRRVK 134
           +A S +S   S +G    + AAA     + + G  + R   +S S+T    +P ++ R +
Sbjct: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTR-RQSSGSATNVASTPDNRGRSR 664

Query: 135 ATATGHTGCPR---PQSRSSSSSS 155
           A     +   R   P    S SSS
Sbjct: 665 AKVVSQSQRSRSANPAGAGSRSSS 688


>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 218

 Score = 33.5 bits (75), Expect = 0.089
 Identities = 46/155 (29%), Positives = 56/155 (36%), Gaps = 30/155 (19%)

Query: 18  SPKVTEPAPG-PVHTKSA--LPG---CARARRSKAS-TKVSGGCRLKHPLI-FRPRWRIL 69
           +P + EP PG PV       LPG   C  AR      +   G CR+  P      RWR  
Sbjct: 65  APSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWR-- 122

Query: 70  AKKITSAGSQRSPGGSRAGRRVSARA-AAARLSP-WG----------TQGPSQGRANMAS 117
                 +G +  PGG +AGR    +A  A  L P W            Q P   RA   S
Sbjct: 123 ------SGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHS 176

Query: 118 PSSTQHVGSP--RSQRRVKATATGHTGCPRPQSRS 150
           P        P    + R  A    H G  RP + S
Sbjct: 177 PHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPS 211


>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 33.5 bits (75), Expect = 0.089
 Identities = 46/155 (29%), Positives = 56/155 (36%), Gaps = 30/155 (19%)

Query: 18  SPKVTEPAPG-PVHTKSA--LPG---CARARRSKAS-TKVSGGCRLKHPLI-FRPRWRIL 69
           +P + EP PG PV       LPG   C  AR      +   G CR+  P      RWR  
Sbjct: 92  APSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWR-- 149

Query: 70  AKKITSAGSQRSPGGSRAGRRVSARA-AAARLSP-WG----------TQGPSQGRANMAS 117
                 +G +  PGG +AGR    +A  A  L P W            Q P   RA   S
Sbjct: 150 ------SGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHS 203

Query: 118 PSSTQHVGSP--RSQRRVKATATGHTGCPRPQSRS 150
           P        P    + R  A    H G  RP + S
Sbjct: 204 PHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPS 238


>gi|195947369 junction-mediating and regulatory protein [Homo
           sapiens]
          Length = 988

 Score = 33.5 bits (75), Expect = 0.089
 Identities = 39/130 (30%), Positives = 51/130 (39%), Gaps = 21/130 (16%)

Query: 55  RLKHPLIFRPRWRILAKKIT------SAGSQRSPGGSRAGRRVSARAAAARLSPWGTQGP 108
           R KH  +F   W  +  K        +A  QRS    +AG R  A A  A     G++GP
Sbjct: 24  REKHKFVFIVAWNEIEGKFAITCHNRTAQRQRSGSREQAGARGGAEAGGAASD--GSRGP 81

Query: 109 SQ--GRANMASPSSTQHVGSPRSQRRVKATATGHTGCPR--------PQSRSSSSSSKAN 158
               GR    + +S   V SP   RR  A A G  G PR        P+ RS  S    +
Sbjct: 82  GSPAGRGRPEATASATLVRSP-GPRRSSAWAEG--GSPRSTRSLLGDPRLRSPGSKGAES 138

Query: 159 CCLTPMVPAP 168
              +P+   P
Sbjct: 139 RLRSPVRAKP 148


>gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]
          Length = 860

 Score = 33.5 bits (75), Expect = 0.089
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 15/115 (13%)

Query: 52  GGCRLKH-PLIFRPRWRILAKKITS-------AGSQRSPGGSRAGRRVSARAAAARLSPW 103
           GGC  +  P+ FRP  R   K++         A   +   G   G  +  R+ A   S  
Sbjct: 63  GGCEGRGAPVSFRPGGRKSRKELRKEKRHLRKARRLQRTAGPEQGPGLGGRSGAEEAS-- 120

Query: 104 GTQGPSQGRANMASPSSTQHVGSPRSQR--RVKATATGHTGCPRPQSRSSSSSSK 156
              G  Q     A P+ ++    PR  R  RVKA AT  T   RP + +++++ K
Sbjct: 121 ---GHRQDTEERARPAPSRDPSPPRKPRPSRVKAKATAATAKTRPSAAATAAARK 172


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.124    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,499,652
Number of Sequences: 37866
Number of extensions: 363911
Number of successful extensions: 2791
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 2497
Number of HSP's gapped (non-prelim): 472
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.