LOC100288860 20944

Name: LOC100288860	Sequence: fasta or formatted (461aa)		NCBI GI: 239751740
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {461aa} PREDICTED: hypothetical protein XP_002343712
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 52 3 C cysteine 3.3 15 2 D aspartate 2.4 11 1 E glutamate 3.7 17 2 F phenylalanine 1.7 8 1 G glycine 15.4 71 4 H histidine 0.7 3 1 I isoleucine 0.9 4 1 K lysine 2.8 13 2 L leucine 11.9 55 2 M methionine 0.4 2 1 N asparagine 2.0 9 1 P proline 11.3 52 3 Q glutamine 3.9 18 2 R arginine 10.6 49 2 S serine 8.7 40 3 T threonine 3.3 15 1 V valine 3.9 18 1 W tryptophan 1.5 7 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100292576 1.000 PREDICTED: hypothetical protein LOC100288860 0.996 PREDICTED: hypothetical protein XP_002343712 COL5A2 0.026 alpha 2 type V collagen preproprotein FLJ37078 0.024 hypothetical protein LOC222183 NACA 0.024 nascent polypeptide-associated complex alpha subuni... COL3A1 0.022 collagen type III alpha 1 preproprotein COL2A1 0.022 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.022 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL7A1 0.022 alpha 1 type VII collagen precursor LOC100130465 0.021 PREDICTED: hypothetical protein LOC100130465 0.021 PREDICTED: hypothetical protein LOC100130465 0.021 PREDICTED: hypothetical protein LOC100291756 0.019 PREDICTED: hypothetical protein XP_002345525 LOC100288538 0.019 PREDICTED: hypothetical protein LOC100288538 0.019 PREDICTED: hypothetical protein XP_002343816 COL1A2 0.018 alpha 2 type I collagen LOC100130128 0.018 PREDICTED: hypothetical protein LOC100130128 0.018 PREDICTED: hypothetical protein LOC100130128 0.018 PREDICTED: hypothetical protein ELN 0.018 elastin isoform d precursor ELN 0.017 elastin isoform c precursor ELN 0.017 elastin isoform b precursor LOC728767 0.017 PREDICTED: hypothetical protein LOC728767 0.017 PREDICTED: hypothetical protein SEC24C 0.017 SEC24-related protein C SEC24C 0.017 SEC24-related protein C COL1A1 0.016 alpha 1 type I collagen preproprotein LOC100130897 0.016 PREDICTED: hypothetical protein LOC100130897 0.016 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.