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Search of human proteins with 239750388
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo
sapiens]
(459 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755899 PREDICTED: hypothetical protein [Homo sapiens] 962 0.0
gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo ... 962 0.0
gi|239753000 PREDICTED: hypothetical protein [Homo sapiens] 39 0.008
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.008
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ... 39 0.013
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ... 39 0.013
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 39 0.013
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.013
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.013
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 38 0.017
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 38 0.022
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 38 0.022
gi|154146199 sal-like 3 [Homo sapiens] 37 0.037
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 37 0.049
gi|4503811 fucosyltransferase 4 [Homo sapiens] 36 0.064
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 36 0.064
gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens] 36 0.064
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 36 0.064
gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens] 36 0.064
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 36 0.064
gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens] 36 0.064
gi|239756274 PREDICTED: hypothetical protein [Homo sapiens] 36 0.083
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 36 0.083
gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo ... 36 0.083
gi|239745938 PREDICTED: hypothetical protein [Homo sapiens] 36 0.083
gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo ... 36 0.083
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 36 0.083
gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] 35 0.11
>gi|239755899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 459
Score = 962 bits (2487), Expect = 0.0
Identities = 459/459 (100%), Positives = 459/459 (100%)
Query: 1 MAAQGPKSGGCGEGLEGVLLCRAVGLERLHHWTLEPGRKPTHSGTGITPQGCTSEAPIAA 60
MAAQGPKSGGCGEGLEGVLLCRAVGLERLHHWTLEPGRKPTHSGTGITPQGCTSEAPIAA
Sbjct: 1 MAAQGPKSGGCGEGLEGVLLCRAVGLERLHHWTLEPGRKPTHSGTGITPQGCTSEAPIAA 60
Query: 61 EDSIPELGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGGTELGE 120
EDSIPELGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGGTELGE
Sbjct: 61 EDSIPELGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGGTELGE 120
Query: 121 DTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPA 180
DTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPA
Sbjct: 121 DTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPA 180
Query: 181 CCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLL 240
CCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLL
Sbjct: 181 CCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLL 240
Query: 241 WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGE 300
WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGE
Sbjct: 241 WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGE 300
Query: 301 YSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAV 360
YSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAV
Sbjct: 301 YSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAV 360
Query: 361 AWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKTERR 420
AWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKTERR
Sbjct: 361 AWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKTERR 420
Query: 421 GRRGKEGRWWWWRRKLGWVGSQMETQLFRGGRSSVAVRS 459
GRRGKEGRWWWWRRKLGWVGSQMETQLFRGGRSSVAVRS
Sbjct: 421 GRRGKEGRWWWWRRKLGWVGSQMETQLFRGGRSSVAVRS 459
>gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo
sapiens]
Length = 459
Score = 962 bits (2487), Expect = 0.0
Identities = 459/459 (100%), Positives = 459/459 (100%)
Query: 1 MAAQGPKSGGCGEGLEGVLLCRAVGLERLHHWTLEPGRKPTHSGTGITPQGCTSEAPIAA 60
MAAQGPKSGGCGEGLEGVLLCRAVGLERLHHWTLEPGRKPTHSGTGITPQGCTSEAPIAA
Sbjct: 1 MAAQGPKSGGCGEGLEGVLLCRAVGLERLHHWTLEPGRKPTHSGTGITPQGCTSEAPIAA 60
Query: 61 EDSIPELGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGGTELGE 120
EDSIPELGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGGTELGE
Sbjct: 61 EDSIPELGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGGTELGE 120
Query: 121 DTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPA 180
DTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPA
Sbjct: 121 DTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPA 180
Query: 181 CCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLL 240
CCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLL
Sbjct: 181 CCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLL 240
Query: 241 WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGE 300
WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGE
Sbjct: 241 WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGE 300
Query: 301 YSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAV 360
YSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAV
Sbjct: 301 YSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAV 360
Query: 361 AWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKTERR 420
AWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKTERR
Sbjct: 361 AWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKTERR 420
Query: 421 GRRGKEGRWWWWRRKLGWVGSQMETQLFRGGRSSVAVRS 459
GRRGKEGRWWWWRRKLGWVGSQMETQLFRGGRSSVAVRS
Sbjct: 421 GRRGKEGRWWWWRRKLGWVGSQMETQLFRGGRSSVAVRS 459
>gi|239753000 PREDICTED: hypothetical protein [Homo sapiens]
Length = 171
Score = 39.3 bits (90), Expect = 0.008
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 153 KPRRADLGCWGSAPRALPC--------PFGRGQLPACCSPATVRPAAQG-------CAQP 197
+PRRA G R C P G G C S + RPAA+ ++P
Sbjct: 13 RPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYLSKP 72
Query: 198 APRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPLSNPEP 257
+P P P+ ALRR +LP G WA A A LP P
Sbjct: 73 SPATHYPAPDSLPSSALRR-RRLPR--------------LGPFWACA-LAPFLPPQVRAP 116
Query: 258 LAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRERSGERKGKK 317
LAP +P L +R ARG E + G +Q A R+G G+G GER+G+K
Sbjct: 117 LAPPTLPL--LFHGER-----ARGKE-RAGHSAQARALRRQGAGLGEG---GGGEREGQK 165
Query: 318 V 318
+
Sbjct: 166 L 166
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 39.3 bits (90), Expect = 0.008
Identities = 50/189 (26%), Positives = 61/189 (32%), Gaps = 29/189 (15%)
Query: 140 RREQTRPSPLSISKPRRADLGCWGSAPRALPCP---------FGRGQLPACCSPATVRPA 190
RR T P+P PR A +AP P P + P + A P
Sbjct: 103 RRGATPPAPPRA--PRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPP 160
Query: 191 AQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSL 250
+ G AQP PR P P P+ AP G A+A R L
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPP---------PAPAAPPAVAPPAGPRRAPPPAVAAREPPL 211
Query: 251 PLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRG----PQSQKEASPRRGEYSGKGQ 306
P P P P P Q+ Q P G + G P S +E G G G
Sbjct: 212 P---PPPQPP--APPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGG 266
Query: 307 RERSGERKG 315
R G +G
Sbjct: 267 RLTRGRVQG 275
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 38.5 bits (88), Expect = 0.013
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 32/166 (19%)
Query: 109 QPGRRG--GTELGEDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAP 166
Q GR G GT+ G G R +EL + SC R + P P K ++ WG
Sbjct: 51 QRGRNGAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQK-----WGGGT 105
Query: 167 RALPCPFGRGQLPACCSP----ATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPS 222
G Q P C+P + + P GC R+ G+ P +LP
Sbjct: 106 -------GTPQSPGPCAPQALASLLGPGKAGC---RTRLQGGSSGASPR-------RLPG 148
Query: 223 SRAPAPSKL----TGGSLAGLLWALAGRACSLPLSNPEPLAPIAVP 264
R PA + TG A A R+ ++P P L P+ +P
Sbjct: 149 GRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLP 194
Score = 30.4 bits (67), Expect = 3.5
Identities = 43/161 (26%), Positives = 53/161 (32%), Gaps = 29/161 (18%)
Query: 76 RTLSPFKSESRTHWVAGQKLN-------FNPTCALSPRLPQPGRRGGTELGEDTRGW-RG 127
R L P R+ WV P AL LP+ G R + G G
Sbjct: 220 RKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAG 279
Query: 128 RSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATV 187
EL T S RR + P +S R+A AP C P P+
Sbjct: 280 LGTELTLTPSSRRAHGSHP----LSSERQA-------APTRAFCSADPLPRPPSFVPSLP 328
Query: 188 RPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAP 228
P AQG A PR+ A+G P R P+P
Sbjct: 329 SPQAQGQAVRQPRLLRAALALG----------APRGRTPSP 359
>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 38.5 bits (88), Expect = 0.013
Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 18/153 (11%)
Query: 132 LLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAA 191
L S GS RR+ R R A G + +A R P P L C PA RPAA
Sbjct: 129 LRSPGSSGRRQAAR---------RGAGTGLYPAAQRRAPAP-----LRPCAIPAPRRPAA 174
Query: 192 QGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLP 251
A R + G P G +LA P +R+PA A GR S
Sbjct: 175 AARLGSAAR-SPGAPPAGRSLAQPHPQSCPLARSPAYRSTGPNDPASNFTEGTGRQRSAA 233
Query: 252 LSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEW 284
+ P P + P R + RG W
Sbjct: 234 AA-PRPF--VTPPTNRWTALSLPSNQRGRGQAW 263
>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
sapiens]
Length = 250
Score = 38.5 bits (88), Expect = 0.013
Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 18/153 (11%)
Query: 132 LLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAA 191
L S GS RR+ R R A G + +A R P P L C PA RPAA
Sbjct: 82 LRSPGSSGRRQAAR---------RGAGTGLYPAAQRRAPAP-----LRPCAIPAPRRPAA 127
Query: 192 QGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLP 251
A R + G P G +LA P +R+PA A GR S
Sbjct: 128 AARLGSAAR-SPGAPPAGRSLAQPHPQSCPLARSPAYRSTGPNDPASNFTEGTGRQRSAA 186
Query: 252 LSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEW 284
+ P P + P R + RG W
Sbjct: 187 AA-PRPF--VTPPTNRWTALSLPSNQRGRGQAW 216
>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
sapiens]
Length = 250
Score = 38.5 bits (88), Expect = 0.013
Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 18/153 (11%)
Query: 132 LLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAA 191
L S GS RR+ R R A G + +A R P P L C PA RPAA
Sbjct: 82 LRSPGSSGRRQAAR---------RGAGTGLYPAAQRRAPAP-----LRPCAIPAPRRPAA 127
Query: 192 QGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLP 251
A R + G P G +LA P +R+PA A GR S
Sbjct: 128 AARLGSAAR-SPGAPPAGRSLAQPHPQSCPLARSPAYRSTGPNDPASNFTEGTGRQRSAA 186
Query: 252 LSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEW 284
+ P P + P R + RG W
Sbjct: 187 AA-PRPF--VTPPTNRWTALSLPSNQRGRGQAW 216
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 38.5 bits (88), Expect = 0.013
Identities = 65/209 (31%), Positives = 78/209 (37%), Gaps = 29/209 (13%)
Query: 103 LSPRLPQPGRRG--GTELGEDTRGWR---GRSRELLSTGSCR------RREQTRPSPLSI 151
L+ +P+PG RG GTE G RG R R LS+GS RR+ T
Sbjct: 1944 LARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKESPG 2003
Query: 152 SKPRRADLG---CWGSAPRALPCPFGRGQLPA---CCSPATVRPAA--QGCAQPAPRVAA 203
+ RR++L SAP+ GR LPA C S AA QG A R A
Sbjct: 2004 LRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPA 2063
Query: 204 GTPAVGPTLALRRLDKLPSS---RAPAPSKLTGGSLAGLLWALAGRACSLPLSNPEPLAP 260
P+ G A R + PS RAPA T A L R P AP
Sbjct: 2064 ARPSPGERPARRTTSESPSRLPVRAPAARPETVKRYASLPHISVARR----PDGAVPAAP 2119
Query: 261 IAVPAQRLQQSQRTGDDP---ARGWEWQR 286
+ A R P A G W+R
Sbjct: 2120 ASADAARRSSDGEPRPLPRVAAPGTTWRR 2148
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.5 bits (88), Expect = 0.013
Identities = 80/309 (25%), Positives = 114/309 (36%), Gaps = 36/309 (11%)
Query: 127 GRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPAT 186
G S + L+T + PS S ++ R +P LP P P
Sbjct: 375 GGSPQPLATTPLSQEPVNPPSEASPTRDRSPP-----KSPEKLPQSSSSESSPPSPQPTK 429
Query: 187 V-RPAAQGCAQPAPRVAAGTP---AVGPTLALRRLD--KLPSSRAPAPSKLTGGSLAGLL 240
V R A+ P P A G+ + PT R K S + PS+ G S +
Sbjct: 430 VSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPAT 489
Query: 241 WALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQ-KEASPRRG 299
A GR+ S P R + Q A+ W R PQ + + SP+R
Sbjct: 490 -AKRGRSRSR--------TPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Query: 300 EYSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDA 359
+S R R+ +R+G+ +RR R S P + S S P RRGR R
Sbjct: 541 GWS----RSRNTQRRGRSR-SARRGR--SHSRSPATRGRSRSRTP---ARRGRSRSR--T 588
Query: 360 VAWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWG---RGWRGK 416
A R SRS T + R SR+ AR + + VR++ R R +
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648
Query: 417 TERRGRRGK 425
+ RRG+
Sbjct: 649 SRTPARRGR 657
Score = 34.7 bits (78), Expect = 0.19
Identities = 73/352 (20%), Positives = 123/352 (34%), Gaps = 45/352 (12%)
Query: 102 ALSPRLPQPGRRG--------------GTELGEDTRGWRGRSRELLSTGSCRRREQTRPS 147
A SPR RRG E TR R R R S + RRR+++R S
Sbjct: 1748 ASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSR-S 1806
Query: 148 PLSISKPRRADLGCWGSAP--RALPCPFGRGQLPACCSPATVRPAAQGCAQPAP------ 199
+++ RR G +P + R + +P T R ++ PAP
Sbjct: 1807 RSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRS 1866
Query: 200 --------RVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLT---GGSLAGLLWALAGRAC 248
R + TP + + R + R+ + + +T S A + R+
Sbjct: 1867 RASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSR 1926
Query: 249 SLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRE 308
+ P++ + P R + RT R + P +++ + R + + R
Sbjct: 1927 TPPVTRRRSRS--RTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRS 1984
Query: 309 RSG---ERKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDAVAWRAS 365
R+ R+ + R S + P + S S P I RR R R + + S
Sbjct: 1985 RTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSR--SRTPLLPRKRS 2042
Query: 366 RSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVVRKKGGDWGRGWRGKT 417
RS + + R + RG RS R P +R++ R ++
Sbjct: 2043 RSRSPLAIRRRSRSRTPRTARGKRSLTR----SPPAIRRRSASGSSSDRSRS 2090
Score = 30.8 bits (68), Expect = 2.7
Identities = 89/380 (23%), Positives = 126/380 (33%), Gaps = 73/380 (19%)
Query: 72 LGRKRTLSPFK---SESRTHWVAGQKLNFNPTCALSPRLPQPGR-----RGGTELGEDTR 123
+GR R+ + K S SRT G + +P S + GR R G
Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Query: 124 GW--------RGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGR 175
GW RGRSR S R TR S + RR A R R
Sbjct: 541 GWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR-----SR 595
Query: 176 GQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAP------- 228
+ P + PA +G R + TPA + + + SR+PA
Sbjct: 596 SRTPTRRRSRSRTPARRG------RSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRS 649
Query: 229 -SKLTGGSLAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRG 287
+ G A GR+ S + + PA+R + RT P RG
Sbjct: 650 RTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRT---PRRG------ 700
Query: 288 PQSQKEASPRRGEYSGKGQRER-----SGERKGKKVFCSRRERLPGSSSFPFSSCLSASH 342
+S+ + RRG + + R S ERK K RR R S+S P
Sbjct: 701 -RSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSR---SNSSP--------- 747
Query: 343 VPLGIGRRGREEGRGDAVAWRASRSLTSVQGERLDHCQCRHVCRGSRSDARLQHQQPLVV 402
E + ++ R SRSL+S + + R GS + + Q P
Sbjct: 748 -----------EMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRR 796
Query: 403 RKKGGDWGRGWRGKTERRGR 422
+ G + RR R
Sbjct: 797 SRSGSSQPKAKSRTPPRRSR 816
Score = 30.0 bits (66), Expect = 4.6
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 206 PAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPLSNPEPLAPIAVPA 265
PAV T L L++ + R A ++ + G + RA PEP P ++
Sbjct: 116 PAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVR 175
Query: 266 QRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRERSGERKGKKVFCSRRER 325
+ T + + RG +S+ +SPRR +++ E + KK R+ R
Sbjct: 176 ESSSSRSPTPKQKKKKKKKDRGRRSE-SSSPRRERKKSSKKKKHRSESESKK----RKHR 230
Query: 326 LPGSSS 331
P S
Sbjct: 231 SPTPKS 236
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.5 bits (88), Expect = 0.013
Identities = 56/225 (24%), Positives = 86/225 (38%), Gaps = 27/225 (12%)
Query: 120 EDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKP-RRADLGCWGSAPR-------ALPC 171
E +R R RSR S RRR+ PSP S P RR +PR P
Sbjct: 160 ESSREKRERSR------SPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPA 213
Query: 172 PFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKL 231
P + + P P+ +P+ + A T + L + + + +P + P+P K
Sbjct: 214 PEKKEKTPELPEPSVK------VKEPSVQEATSTSDI---LKVPKPEPIPEPKEPSPEKN 264
Query: 232 TGGSLAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQ 291
+ R+ S S +P +R +S+ P R +R P +
Sbjct: 265 SKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPR 324
Query: 292 KEASPRRGEYSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSS 336
+ PRR + +R RS R+ ++ S L GSSS SS
Sbjct: 325 RRTPPRRMPPPPRHRRSRSPVRRRRRSSAS----LSGSSSSSSSS 365
Score = 34.3 bits (77), Expect = 0.24
Identities = 65/278 (23%), Positives = 89/278 (32%), Gaps = 61/278 (21%)
Query: 59 AAEDSIPE---LGEGVLGRKRTLSPFKSESRTHWVAGQKLNFNPTCALSPRLPQPGRRGG 115
++ED P+ + G +GR+R SP +S S P P +R
Sbjct: 501 SSEDERPKRSHVKNGEVGRRRRHSPSRSAS----------------------PSPRKR-- 536
Query: 116 TELGEDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGR 175
+ RGR R S RRR P+P P R R P P R
Sbjct: 537 ----QKETSPRGRRRRSPSPPPTRRRRSPSPAP-----PPRRRRTPTPPPRRRTPSPPPR 587
Query: 176 GQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGS 235
+ P SP P Q P+P T + P K +S +P P + S
Sbjct: 588 RRSP---SPRRYSPPIQRRYSPSPPPKRRTASPPPP------PKRRASPSPPPKRRVSHS 638
Query: 236 LAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEAS 295
P P+ P+ L R G P+R R PQ K S
Sbjct: 639 PP-------------PKQRSSPVTKRRSPS--LSSKHRKGSSPSRSTREARSPQPNKRHS 683
Query: 296 PRRGEYSGKGQRERSGERKGKKVFCSRRERLPGSSSFP 333
P + + R+G RR+ P S+ P
Sbjct: 684 PSPRPRAPQTSSSPPPVRRGASSSPQRRQS-PSPSTRP 720
>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
sapiens]
Length = 316
Score = 38.1 bits (87), Expect = 0.017
Identities = 45/166 (27%), Positives = 62/166 (37%), Gaps = 32/166 (19%)
Query: 109 QPGRRG--GTELGEDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAP 166
Q GR G GT+ G G R +E+ + SC R + P P K + WG
Sbjct: 51 QRGRNGAPGTQRGVREVGSPTRDQEIRAGSSCGRAARGFPEPGRGGKTQE-----WGGGT 105
Query: 167 RALPCPFGRGQLPACCSP----ATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPS 222
G Q P C+P + + P GC R+ G+ P +LP
Sbjct: 106 -------GTPQSPGPCAPQALASLLGPGKAGC---RARLQGGSSGASPR-------RLPG 148
Query: 223 SRAPAPSKL----TGGSLAGLLWALAGRACSLPLSNPEPLAPIAVP 264
R PA + TG A A R+ ++P P L P+ VP
Sbjct: 149 GRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRVP 194
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 37.7 bits (86), Expect = 0.022
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 145 RPSPLSISKPRRADLGCWGSAPRAL----PCPFGRGQLPACCSPATVRPAAQGCAQPAPR 200
RPSP ++ R L C PR P P A CSPA V C P P
Sbjct: 39 RPSP---ARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPL 95
Query: 201 VAAGTPAVGPTLALRRLDKLPSSRAPAPS 229
A + P +A R + P S P+PS
Sbjct: 96 ALAARRSQSPRVASTRSLRPPGSPVPSPS 124
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 37.7 bits (86), Expect = 0.022
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 145 RPSPLSISKPRRADLGCWGSAPRAL----PCPFGRGQLPACCSPATVRPAAQGCAQPAPR 200
RPSP ++ R L C PR P P A CSPA V C P P
Sbjct: 39 RPSP---ARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPL 95
Query: 201 VAAGTPAVGPTLALRRLDKLPSSRAPAPS 229
A + P +A R + P S P+PS
Sbjct: 96 ALAARRSQSPRVASTRSLRPPGSPVPSPS 124
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 37.0 bits (84), Expect = 0.037
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 8/126 (6%)
Query: 148 PLSISKPRRADLGCWGSAPRALPC--PFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGT 205
PLS P A G +AP A P R + A P+A AP AA
Sbjct: 265 PLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPA 324
Query: 206 PAVGPTLALRRLDKLPSSRAPAPSKLTG---GSLAGLLWALAGRACSLPLSNPEPLAPIA 262
PA P A P S + P+ G G+ GL L + + + P PL IA
Sbjct: 325 PAPAPQSA---ASSQPQSASTPPALAPGSLLGAAPGLPSPLLPQTSASGVIFPNPLVSIA 381
Query: 263 VPAQRL 268
A L
Sbjct: 382 ATANAL 387
Score = 32.0 bits (71), Expect = 1.2
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 151 ISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGP 210
+S+P G A + P PA +PA PA Q A P+ A+ PA+ P
Sbjct: 292 LSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPA---PAPQSAASSQPQSASTPPALAP 348
Query: 211 TLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSL-PLS 253
L LPS P S +G L ++A A +L PLS
Sbjct: 349 GSLLGAAPGLPSPLLPQTS-ASGVIFPNPLVSIAATANALDPLS 391
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 36.6 bits (83), Expect = 0.049
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 178 LPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLA 237
+ A + A AA A PAP +AA A P LA L ++ APAP+ ++A
Sbjct: 499 IAAAAAAAAAAAAAAAAAAPAPALAA---AAAPALAAAAAPALAAAAAPAPAPAAAPAVA 555
Query: 238 GLLWALAGRACSLPLSNPEPLAPI 261
A A A + P + +P P+
Sbjct: 556 A---APAAAASAAPSHSQKPSVPL 576
>gi|4503811 fucosyltransferase 4 [Homo sapiens]
Length = 530
Score = 36.2 bits (82), Expect = 0.064
Identities = 49/157 (31%), Positives = 63/157 (40%), Gaps = 28/157 (17%)
Query: 281 GWE--WQRGPQSQKEASPRRGEYSGKGQRERSGERKGKKVFCSRRERLPGSSSFPFSSCL 338
GWE W PQ G +SG+ RSG RKG+ V PG +S+P L
Sbjct: 15 GWEKEWAEAPQEAP------GAWSGRLGPGRSG-RKGRAV--------PGWASWPAHLAL 59
Query: 339 SAS---HVPLGIGRRGREEGRGDAVAWRASRSLTSVQGERLDHCQCRHV--CRGSRSDAR 393
+A H+ G G+ R G A S S + +R Q +H CR S
Sbjct: 60 AARPARHLG-GAGQGPRPLHSGTA----PFHSRASGERQRRLEPQLQHESRCRSSTPADA 114
Query: 394 LQHQQPLVVRKKGGDWGRGWRGKTERRG-RRGKEGRW 429
+ + L VR G WG RRG RRG+ W
Sbjct: 115 WRAEAALPVRAMGAPWGSPTAAAGGRRGWRRGRGLPW 151
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 36.2 bits (82), Expect = 0.064
Identities = 63/240 (26%), Positives = 78/240 (32%), Gaps = 45/240 (18%)
Query: 106 RLPQPGR-RGGTELGEDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGS 164
R P PGR R + G+ G RE + S + T PRR G
Sbjct: 54 RSPTPGRARAAPQQGDG-----GARRERAAAESLGTQSATLG-------PRRG-----GL 96
Query: 165 APRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSR 224
R P FG G LP A V+A +P P L P +
Sbjct: 97 RSRTDPA-FGAGPLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGK 155
Query: 225 APAPSKLTGGSLAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEW 284
AP GG L A G NP L+P + Q ++RT GW
Sbjct: 156 TSAPRPSPGGRRGRPLGAARGTGL-----NPG-LSPRLQEPRGHQSARRTDTASRAGWAT 209
Query: 285 QRGPQSQKEASPRRGE-------------YSGKGQRERSGER---KGKKVFCSRRERLPG 328
+R P ++ RG GKGQR ER G+ R RLPG
Sbjct: 210 RRAPSRRRNFGAPRGSRRLRPDAGKFPEASGGKGQRAAGAERVLNNGR----GPRSRLPG 265
>gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 578
Score = 36.2 bits (82), Expect = 0.064
Identities = 36/135 (26%), Positives = 46/135 (34%), Gaps = 4/135 (2%)
Query: 102 ALSPRLPQPGRRGGTELG--EDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADL 159
+L PRLP+ G RG + G D RG + S S R + R D
Sbjct: 100 SLPPRLPRRGGRGDSAGGGGRDREAGRGEANPAHSARSPERPRKPEAGAQDFRDSERTDR 159
Query: 160 GCWGSAPRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDK 219
C + P P P A R G A APR AG P + L +
Sbjct: 160 DCQPLRVKDSPHPCPPPGAPNSLVSAAARALDAGAAAMAPR--AGQPGLQGLLLVAAALS 217
Query: 220 LPSSRAPAPSKLTGG 234
P++ P GG
Sbjct: 218 QPAAPCPFQCYCFGG 232
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 36.2 bits (82), Expect = 0.064
Identities = 63/240 (26%), Positives = 78/240 (32%), Gaps = 45/240 (18%)
Query: 106 RLPQPGR-RGGTELGEDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGS 164
R P PGR R + G+ G RE + S + T PRR G
Sbjct: 54 RSPTPGRARAAPQQGDG-----GARRERAAAESLGTQSATLG-------PRRG-----GL 96
Query: 165 APRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSR 224
R P FG G LP A V+A +P P L P +
Sbjct: 97 RSRTDPA-FGAGPLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGK 155
Query: 225 APAPSKLTGGSLAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEW 284
AP GG L A G NP L+P + Q ++RT GW
Sbjct: 156 TSAPRPSPGGRRGRPLGAARGTGL-----NPG-LSPRLQEPRGHQSARRTDTASRAGWAT 209
Query: 285 QRGPQSQKEASPRRGE-------------YSGKGQRERSGER---KGKKVFCSRRERLPG 328
+R P ++ RG GKGQR ER G+ R RLPG
Sbjct: 210 RRAPSRRRNFGAPRGSRRLRPDAGKFPEASGGKGQRAAGAERVLDNGR----GPRSRLPG 265
>gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 578
Score = 36.2 bits (82), Expect = 0.064
Identities = 36/135 (26%), Positives = 46/135 (34%), Gaps = 4/135 (2%)
Query: 102 ALSPRLPQPGRRGGTELG--EDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADL 159
+L PRLP+ G RG + G D RG + S S R + R D
Sbjct: 100 SLPPRLPRRGGRGDSAGGGGRDREAGRGEANPAHSARSPERPRKPEAGAQDFRDSERTDR 159
Query: 160 GCWGSAPRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDK 219
C + P P P A R G A APR AG P + L +
Sbjct: 160 DCQPLRVKDSPHPCPPPGAPNSLVSAAARALDAGAAAMAPR--AGQPGLQGLLLVAAALS 217
Query: 220 LPSSRAPAPSKLTGG 234
P++ P GG
Sbjct: 218 QPAAPCPFQCYCFGG 232
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 36.2 bits (82), Expect = 0.064
Identities = 63/240 (26%), Positives = 78/240 (32%), Gaps = 45/240 (18%)
Query: 106 RLPQPGR-RGGTELGEDTRGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGS 164
R P PGR R + G+ G RE + S + T PRR G
Sbjct: 54 RSPTPGRARAAPQQGDG-----GARRERAAAESLGTQSATLG-------PRRG-----GL 96
Query: 165 APRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPTLALRRLDKLPSSR 224
R P FG G LP A V+A +P P L P +
Sbjct: 97 RSRTDPA-FGAGPLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGK 155
Query: 225 APAPSKLTGGSLAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPARGWEW 284
AP GG L A G NP L+P + Q ++RT GW
Sbjct: 156 TSAPRPSPGGRRGRPLGAARGTGL-----NPG-LSPRLQEPRGHQSARRTDTASRAGWAT 209
Query: 285 QRGPQSQKEASPRRGE-------------YSGKGQRERSGER---KGKKVFCSRRERLPG 328
+R P ++ RG GKGQR ER G+ R RLPG
Sbjct: 210 RRAPSRRRNFGAPRGSRRLRPDAGKFPEASGGKGQRAAGAERVLDNGR----GPRSRLPG 265
>gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens]
Length = 193
Score = 36.2 bits (82), Expect = 0.064
Identities = 49/177 (27%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 140 RREQTRPSP---LSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAAQGCAQ 196
R+E + P P L+ PR LG P A+ C L A + T+ PAA CA
Sbjct: 5 RQEGSSPEPVEGLARDGPRPFPLG--RLVPSAVSCGLCEPGLAAAPAAPTLLPAAYLCAP 62
Query: 197 PAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPLSNPE 256
AP PAV L R P SR P G L A L +P
Sbjct: 63 TAP------PAVTAALGGSRWPGGPRSRPRGPR--PDGPQPSLSLA------EQHLESPV 108
Query: 257 PLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRERSGER 313
P AP A+ Q + + + W + G Q ++ A +Y + Q E+ R
Sbjct: 109 PSAPGALAGGPTQAAPGVRGEEEQ-WAREIGAQLRRMADDLNAQYERRRQEEQQRHR 164
>gi|239756274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 775
Score = 35.8 bits (81), Expect = 0.083
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 175 RGQLPAC-CSPATVRPAAQ--GCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKL 231
R LPA PA V P+ + G P+PR + PA GP R P R PA S
Sbjct: 607 RDVLPAAKVPPAAVAPSQRRSGTLPPSPRASLSPPA-GPQSGSVRDAAFPRVRQPAGSLK 665
Query: 232 TGGSLAGLL--WALAGRACSLPLSNP 255
G L LL LAG A + + NP
Sbjct: 666 RGAPLGTLLPFGLLAGSAAAAAVGNP 691
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 35.8 bits (81), Expect = 0.083
Identities = 54/233 (23%), Positives = 76/233 (32%), Gaps = 28/233 (12%)
Query: 123 RGWRGRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFG---RGQLP 179
RG R R + + + E+ P P S + G+ + P G R +
Sbjct: 691 RGLRADHRAICNEDAAGEAERRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPW 750
Query: 180 ACCSPATVRPAAQGCAQPAPRVAAGTPAVGP------TLALRRLDKLPSSRAPAPSKLT- 232
+ +P R A+G QP P +G GP T R DKL S ++LT
Sbjct: 751 SPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTA 810
Query: 233 -------------GGSLAGLLWALAGRACSLPLSNPEPLAPIAVPAQRLQQSQRTGDDPA 279
G + G + A RA P P PA + R+ A
Sbjct: 811 GRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARS----A 866
Query: 280 RGWEWQRGPQSQKEASPRRGEYSGKGQRERSGERKGKKVFCSRRERLPGSSSF 332
RG W A+PR + R R G + R G SS+
Sbjct: 867 RG-SWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSY 918
>gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo
sapiens]
Length = 765
Score = 35.8 bits (81), Expect = 0.083
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 175 RGQLPAC-CSPATVRPAAQ--GCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKL 231
R LPA PA V P+ + G P+PR + PA GP R P R PA S
Sbjct: 597 RDVLPAAKVPPAAVAPSQRRSGTLPPSPRASLSPPA-GPQSGSVRDAAFPRVRQPAGSLK 655
Query: 232 TGGSLAGLL--WALAGRACSLPLSNP 255
G L LL LAG A + + NP
Sbjct: 656 RGAPLGTLLPFGLLAGSAAAAAVGNP 681
>gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 35.8 bits (81), Expect = 0.083
Identities = 50/196 (25%), Positives = 63/196 (32%), Gaps = 31/196 (15%)
Query: 29 LHHWTLEPGRKPTHSGTGITPQGCTSEAPIAAEDSIPELGEGVLGRKRTLSPFKS----- 83
+HH+ P P G G Q + A A +P G LG +R L P +
Sbjct: 134 VHHFVHGP---PGRGGPG---QVAAAAAAAPASSPLPP-GRWCLGDQRRLPPATAAPPWA 186
Query: 84 ESRTHWVAGQ-KLNFNPTCA-------LSPRLPQPGRRGGTELGEDTRGWRGRSRELLST 135
S T W Q + PTC LSP + GG G G R
Sbjct: 187 SSATAWRLPQPRRRRRPTCPCCSRCRELSPPMGPDLGGGGGGAGAGAGAGAGAQRSAAEA 246
Query: 136 GSC-----RRREQTRPSPLSISKPRRADLGCWGS------APRALPCPFGRGQLPACCSP 184
C R + P K RR D WG PR+ G+ +P C P
Sbjct: 247 AGCLGCLPRLPLMSEPRTGEKGKRRRRDGRGWGGLRGRAGGPRSAEAGGGKRLIPNCWGP 306
Query: 185 ATVRPAAQGCAQPAPR 200
R C P P+
Sbjct: 307 TQDRLQPPSCFIPLPQ 322
>gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo
sapiens]
Length = 765
Score = 35.8 bits (81), Expect = 0.083
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 175 RGQLPAC-CSPATVRPAAQ--GCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKL 231
R LPA PA V P+ + G P+PR + PA GP R P R PA S
Sbjct: 597 RDVLPAAKVPPAAVAPSQRRSGTLPPSPRASLSPPA-GPQSGSVRDAAFPRVRQPAGSLK 655
Query: 232 TGGSLAGLL--WALAGRACSLPLSNP 255
G L LL LAG A + + NP
Sbjct: 656 RGAPLGTLLPFGLLAGSAAAAAVGNP 681
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 35.8 bits (81), Expect = 0.083
Identities = 69/289 (23%), Positives = 94/289 (32%), Gaps = 44/289 (15%)
Query: 135 TGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCS--PATVRPAAQ 192
TGS R PSP S WGS R G GQ P +
Sbjct: 289 TGSQRSSGSRSPSPSGGSG--------WGSPQRN----GGSGQRSGAHGGRPGSAHSPPD 336
Query: 193 GCAQPAPRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPL 252
+ P+PRV A PT R + PS R+ S+ GG AG AGR
Sbjct: 337 KPSSPSPRVRDKAAAAAPTPPARGKES-PSPRSAPSSQGRGGRAAG----GAGRRRRRRR 391
Query: 253 SNPEPLAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRERSGE 312
+ + P +R ++ R R S S R G G
Sbjct: 392 RRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGR----GAPGPGPEPGS 447
Query: 313 RKGKKVFCSRRERLPGSSSFPFSSCLSASHVPLGIGRRGREEGRGDA-------VAWRAS 365
+G R + P P + S S P GRRG EG+ + +W +S
Sbjct: 448 ERGHGGHGKRAKERP-----PRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502
Query: 366 RSLT---SVQGERLDHCQCRH------VCRGSRSDARLQHQQPLVVRKK 405
RS + S E+ H R + R + R +H + R +
Sbjct: 503 RSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRAR 551
Score = 33.9 bits (76), Expect = 0.32
Identities = 67/258 (25%), Positives = 98/258 (37%), Gaps = 39/258 (15%)
Query: 104 SPR-LPQPGRRGGTELGEDTRGWRGRSRELLSTGSC---RRREQTRPSPL-------SIS 152
SPR P RGG G R R R R S S RRR + RP P S+S
Sbjct: 365 SPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLS 424
Query: 153 KPR-RADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAAQGCAQPAPRVAAGTPAVGPT 211
+ R +D G AP P P A RP P R A+ +P+ G
Sbjct: 425 RARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERP-------PRARPASTSPSPGAH 477
Query: 212 LALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPLS---NPEPLAPIAVPAQRL 268
+ SSR+P P + S + + A P S +P P P++
Sbjct: 478 GRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLS------ 531
Query: 269 QQSQRTGDDPARGWEWQ--RGPQSQKEASPRRGEYSGKGQRERSGERKGKKVFCSRRERL 326
+ G+ AR E + R + + SP R K +R+ + +++ +R+ +
Sbjct: 532 --RDKDGEGRARHSEAEATRARRRSRSYSPIR-----KRRRDSPSFMEPRRITSARKRPI 584
Query: 327 PGSSSFP--FSSCLSASH 342
P P SSCLS+ +
Sbjct: 585 PYYRPSPSSSSSCLSSDY 602
>gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 363
Score = 35.4 bits (80), Expect = 0.11
Identities = 42/147 (28%), Positives = 55/147 (37%), Gaps = 18/147 (12%)
Query: 82 KSESRTHWVAGQKLNFNPTCALSPRLPQP-GRRGGTELGEDTRG-------WRGRSRELL 133
+ +SR H + Q P + PR P P GR GG G WR L
Sbjct: 125 RRDSRRHVTSSQPPL--PATQIRPRNPCPAGRAGGHVAGAPVPAAPWCMYLWRSSPLGSL 182
Query: 134 STGSCRRREQTRPSPLSISKPRRADLGCWGSAPRALPCPFGRGQLPACCSPATVRPAAQG 193
TG+ +R +I LG P+ +P P G+ C SP T R AA G
Sbjct: 183 ITGNNQRFRDHPGENRNIYIASIPPLG----VPQDMPSPGLAGRRGQCASPGTSRAAAAG 238
Query: 194 CAQPAPRVAAGTPAVGPTLALRRLDKL 220
A R G+P+ A R+ L
Sbjct: 239 RA----RARTGSPSSDVAAAAGRITLL 261
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,156,327
Number of Sequences: 37866
Number of extensions: 1318916
Number of successful extensions: 5876
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 5676
Number of HSP's gapped (non-prelim): 397
length of query: 459
length of database: 18,247,518
effective HSP length: 106
effective length of query: 353
effective length of database: 14,233,722
effective search space: 5024503866
effective search space used: 5024503866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.