Guide to the Human Genome
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Name: CD55 Sequence: fasta or formatted (381aa) NCBI GI: 10835143
Description:

decay accelerating factor for complement isoform 1 preproprotein

Referenced in:

Complement

Other entries for this name:
alt prot [440aa] decay accelerating factor for complement isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         13           2
 C cysteine            4.7         18           1
 D aspartate           2.6         10           1
 E glutamate           6.0         23           2
 F phenylalanine       3.1         12           1
 G glycine             8.1         31           2
 H histidine           1.3          5           1
 I isoleucine          4.2         16           2
 K lysine              5.0         19           3
 L leucine             8.7         33           4
 M methionine          0.8          3           1
 N asparagine          3.9         15           2
 P proline             9.4         36           3
 Q glutamine           3.4         13           1
 R arginine            4.2         16           2
 S serine              8.9         34           2
 T threonine          11.5         44           3
 V valine              6.3         24           2
 W tryptophan          1.3          5           1
 Y tyrosine            2.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   decay accelerating factor for complement isoform 1 p... 
CD55                  0.951   decay accelerating factor for complement isoform 2 ...
CR1                   0.185   complement receptor 1 isoform S precursor 
CR1                   0.185   complement receptor 1 isoform F precursor 
CR1L                  0.168   complement component (3b/4b) receptor 1-like 
C4BPA                 0.167   complement component 4 binding protein, alpha chain p...
CR2                   0.121   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.121   complement component (3d/Epstein Barr virus) recepto...
SVEP1                 0.118   polydom 
CSMD3                 0.107   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.107   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.107   CUB and Sushi multiple domains 3 isoform 1 
CSMD1                 0.106   CUB and Sushi multiple domains 1 
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.106   CD46 antigen, complement regulatory protein isoform ...
SEZ6L2                0.093   seizure related 6 homolog (mouse)-like 2 isoform 4 ...
SEZ6L2                0.093   seizure related 6 homolog (mouse)-like 2 isoform 3 ...
SEZ6L2                0.093   seizure related 6 homolog (mouse)-like 2 isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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