BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo sapiens] (252 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 526 e-150 gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 245 3e-65 gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 245 3e-65 gi|38372917 C1q and tumor necrosis factor related protein 1 isof... 233 9e-62 gi|13569944 C1q and tumor necrosis factor related protein 1 isof... 233 9e-62 gi|38372913 C1q and tumor necrosis factor related protein 1 [Hom... 227 9e-60 gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 92 3e-19 gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho... 92 6e-19 gi|4757760 adiponectin precursor [Homo sapiens] 86 4e-17 gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 84 9e-17 gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 84 2e-16 gi|7705753 complement component 1, q subcomponent, A chain precu... 82 4e-16 gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 82 4e-16 gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 79 5e-15 gi|56786155 complement component 1, q subcomponent, C chain prec... 78 6e-15 gi|166235903 complement component 1, q subcomponent, C chain pre... 78 6e-15 gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 77 1e-14 gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 77 2e-14 gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 75 4e-14 gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 75 4e-14 gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 72 4e-13 gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 71 8e-13 gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 70 1e-12 gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 69 3e-12 gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 69 3e-12 gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 69 3e-12 gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 67 1e-11 gi|87298828 complement component 1, q subcomponent, B chain prec... 62 6e-10 gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 62 6e-10 gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 62 6e-10 >gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo sapiens] Length = 252 Score = 526 bits (1354), Expect = e-150 Identities = 252/252 (100%), Positives = 252/252 (100%) Query: 1 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR 60 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR Sbjct: 1 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR 60 Query: 61 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS 120 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS Sbjct: 61 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS 120 Query: 121 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL 180 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL Sbjct: 121 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL 180 Query: 181 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT 240 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT Sbjct: 181 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT 240 Query: 241 FSGHLVKPAAEL 252 FSGHLVKPAAEL Sbjct: 241 FSGHLVKPAAEL 252 >gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo sapiens] Length = 278 Score = 245 bits (625), Expect = 3e-65 Identities = 121/222 (54%), Positives = 152/222 (68%), Gaps = 3/222 (1%) Query: 26 CVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSG 85 C CC P P A VS LP +RP I+I ILKG+KG+ G G G G Sbjct: 56 CQRCCDSEDPLDP-AHVSSAS--SSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112 Query: 86 KEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNL 145 +EGP G G QG +G KG++G PGA C++ + AFSVGR+ LHS + FQ + F+ VNL Sbjct: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172 Query: 146 DGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQ 205 DG FD+A G+F + G+YF SLNVH+WNYKETY+HIM N++ A +LYAQPSERS+MQ+Q Sbjct: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232 Query: 206 SLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVK 247 S+ML LA GD VWVR+F+R R+NAIY D YITFSGHL+K Sbjct: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274 >gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo sapiens] Length = 278 Score = 245 bits (625), Expect = 3e-65 Identities = 121/222 (54%), Positives = 152/222 (68%), Gaps = 3/222 (1%) Query: 26 CVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSG 85 C CC P P A VS LP +RP I+I ILKG+KG+ G G G G Sbjct: 56 CQRCCDSEDPLDP-AHVSSAS--SSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112 Query: 86 KEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNL 145 +EGP G G QG +G KG++G PGA C++ + AFSVGR+ LHS + FQ + F+ VNL Sbjct: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172 Query: 146 DGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQ 205 DG FD+A G+F + G+YF SLNVH+WNYKETY+HIM N++ A +LYAQPSERS+MQ+Q Sbjct: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232 Query: 206 SLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVK 247 S+ML LA GD VWVR+F+R R+NAIY D YITFSGHL+K Sbjct: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274 >gi|38372917 C1q and tumor necrosis factor related protein 1 isoform 1 [Homo sapiens] Length = 281 Score = 233 bits (595), Expect = 9e-62 Identities = 119/232 (51%), Positives = 148/232 (63%), Gaps = 18/232 (7%) Query: 20 GLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRG 79 GLP C+ CC P P V P I+I ILKGEKG+ G RG Sbjct: 67 GLPASRCLRCCDPGTSMYPATAV------------------PQINITILKGEKGDRGDRG 108 Query: 80 RAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFD 139 G+ GK G GARG G +GQKG +G PG C+ YAAFSVGR++ +HS+ ++Q V FD Sbjct: 109 LQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFD 168 Query: 140 TELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSER 199 TE VNL F++ G+F C VPG+YF SLNVHTWN KETYLHIM N +L+AQ +R Sbjct: 169 TEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDR 228 Query: 200 SVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKPAAE 251 S+MQ+QSLML L D VWVR+++ +R+NAI+ E D YITFSG+LVK A E Sbjct: 229 SIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATE 280 >gi|13569944 C1q and tumor necrosis factor related protein 1 isoform 1 [Homo sapiens] Length = 281 Score = 233 bits (595), Expect = 9e-62 Identities = 119/232 (51%), Positives = 148/232 (63%), Gaps = 18/232 (7%) Query: 20 GLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRG 79 GLP C+ CC P P V P I+I ILKGEKG+ G RG Sbjct: 67 GLPASRCLRCCDPGTSMYPATAV------------------PQINITILKGEKGDRGDRG 108 Query: 80 RAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFD 139 G+ GK G GARG G +GQKG +G PG C+ YAAFSVGR++ +HS+ ++Q V FD Sbjct: 109 LQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFD 168 Query: 140 TELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSER 199 TE VNL F++ G+F C VPG+YF SLNVHTWN KETYLHIM N +L+AQ +R Sbjct: 169 TEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDR 228 Query: 200 SVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKPAAE 251 S+MQ+QSLML L D VWVR+++ +R+NAI+ E D YITFSG+LVK A E Sbjct: 229 SIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATE 280 >gi|38372913 C1q and tumor necrosis factor related protein 1 [Homo sapiens] Length = 199 Score = 227 bits (578), Expect = 9e-60 Identities = 110/191 (57%), Positives = 138/191 (72%) Query: 61 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS 120 P I+I ILKGEKG+ G RG G+ GK G GARG G +GQKG +G PG C+ YAAFS Sbjct: 8 PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67 Query: 121 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL 180 VGR++ +HS+ ++Q V FDTE VNL F++ G+F C VPG+YF SLNVHTWN KETYL Sbjct: 68 VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127 Query: 181 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT 240 HIM N +L+AQ +RS+MQ+QSLML L D VWVR+++ +R+NAI+ E D YIT Sbjct: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187 Query: 241 FSGHLVKPAAE 251 FSG+LVK A E Sbjct: 188 FSGYLVKHATE 198 >gi|56606142 complement component 1, q subcomponent-like 4 [Homo sapiens] Length = 238 Score = 92.4 bits (228), Expect = 3e-19 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 18/190 (9%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG--------AACRRAYAAFSV 121 G KGE G RG+AG G GPPG RG G G+ G GPPG AA AF Sbjct: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYA 114 Query: 122 GRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV--HTWNYKETY 179 G R + ++ + FD + N+ A++ A+G+F C +PGVYF + +V + + Sbjct: 115 GLR---RPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMW 171 Query: 180 LHIMLNRRPAAVLYAQPSERSVMQA-QSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLY 238 +M N + A AQ ++++ A S++L L GD V++++ ++G + + Y Sbjct: 172 ADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL----DGGKVHGGNTNKY 227 Query: 239 ITFSGHLVKP 248 TFSG ++ P Sbjct: 228 STFSGFIIYP 237 >gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo sapiens] Length = 329 Score = 91.7 bits (226), Expect = 6e-19 Identities = 65/150 (43%), Positives = 77/150 (51%), Gaps = 11/150 (7%) Query: 106 GPPGAACRRAYAAFSVGRREGLHSSD-----HFQAVPFDTELVNLDGAFDLAAGRFLCTV 160 GPP R+ AFS R L SD Q + FDTE VN+ G FD AAG F C + Sbjct: 168 GPPAPPEPRS--AFSAARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRL 225 Query: 161 PGVYFLSLNVHTWNYKETYLHIMLNRRPA-AVLYAQ-PSERSVMQAQSLMLLLAAGDAVW 218 PG YF S + K + +M NR A++Y S R MQ+QS+ML L GDAVW Sbjct: 226 PGAYFFSFTLGKLPRKTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVW 285 Query: 219 VRMFQRDRDNAIYGEHGDLYITFSGHLVKP 248 + D A Y HG YITFSG LV P Sbjct: 286 LLSHDHDGYGA-YSNHGK-YITFSGFLVYP 313 Score = 67.8 bits (164), Expect = 9e-12 Identities = 52/151 (34%), Positives = 68/151 (45%), Gaps = 10/151 (6%) Query: 105 VGP-PGAACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGV 163 +GP PG +AFS R L + AV FD VN+ G FD+A G+F C VPG Sbjct: 17 LGPTPGPGSSELRSAFSAARTTPLEGTSEM-AVTFDKVYVNIGGDFDVATGQFRCRVPGA 75 Query: 164 YFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQ---AQSLMLLLAAGDAVWVR 220 YF S +K + ++ NR L R + +QS ML L GD VW+R Sbjct: 76 YFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQSAMLQLDYGDTVWLR 135 Query: 221 MFQRDRDNAIYGEHGDLYITFSGHLVKPAAE 251 + G G TFSG+LV A+ Sbjct: 136 L--HGAPQYALGAPG---ATFSGYLVYADAD 161 >gi|4757760 adiponectin precursor [Homo sapiens] Length = 244 Score = 85.5 bits (210), Expect = 4e-17 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 5/179 (2%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLH 128 KGEKG+ G+ G G G+ G PGA G +G G +G+ G PG +AFSVG + Sbjct: 65 KGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRSAFSVGLETYVT 124 Query: 129 SSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRP 188 + + F N +D + G+F C +PG+Y+ + ++ T K+ + + + Sbjct: 125 IPN--MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHI-TVYMKDVKVSLFKKDKA 181 Query: 189 AAVLYAQPSERSVMQAQ-SLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLV 246 Y Q E +V QA S++L L GD VW++++ N +Y ++ D TF+G L+ Sbjct: 182 MLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADN-DNDSTFTGFLL 239 >gi|5729785 complement component 1, q subcomponent-like 1 [Homo sapiens] Length = 258 Score = 84.3 bits (207), Expect = 9e-17 Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 29/262 (11%) Query: 6 LLLLALLLPVGAWPGLPRR--PCVHCCR------PAWPPGPYARVSDRDLWRGDLWRGLP 57 LL+L +L+PV G P + CR PA PG AR D G P Sbjct: 2 LLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQ--SGAP 59 Query: 58 RVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYA 117 P+ ++ +G+ G G G G G GPPG G G +G+ G+ GPPG Sbjct: 60 P--PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSG 117 Query: 118 AFS---------VGRREGL-HSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLS 167 A S V GL + + ++ + FD + NL +D A+G+F C +PG YF + Sbjct: 118 AISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFT 177 Query: 168 LNV--HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQA-QSLMLLLAAGDAVWVRMFQR 224 +V + + + N + A AQ ++++ A S++L L AGD V++++ Sbjct: 178 YHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKL--- 234 Query: 225 DRDNAIYGEHGDLYITFSGHLV 246 D A +G + + Y TFSG ++ Sbjct: 235 DGGKA-HGGNSNKYSTFSGFII 255 >gi|58801559 complement component 1, q subcomponent-like 3 [Homo sapiens] Length = 255 Score = 83.6 bits (205), Expect = 2e-16 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 27/212 (12%) Query: 54 RGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQV------GP 107 RGL + PT ++G KGEAG G+AG G G PG G G G+KG+ GP Sbjct: 49 RGLMQSLPTF----IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGP 104 Query: 108 PGAACRRAYAAFSVGRREGL----------HSSDHFQAVPFDTELVNLDGAFDLAAGRFL 157 PGA A A S + + ++ + FD + NL +D G+F Sbjct: 105 PGAPGLNAAGAISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFT 164 Query: 158 CTVPGVYFLSLNV--HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQA-QSLMLLLAAG 214 C++PG+YF + +V + + + N + A AQ ++++ A S++L L G Sbjct: 165 CSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPG 224 Query: 215 DAVWVRMFQRDRDNAIYGEHGDLYITFSGHLV 246 D V++++ D A +G + + Y TFSG ++ Sbjct: 225 DEVYIKL---DGGKA-HGGNNNKYSTFSGFII 252 >gi|7705753 complement component 1, q subcomponent, A chain precursor [Homo sapiens] Length = 245 Score = 82.0 bits (201), Expect = 4e-16 Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 11/199 (5%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRR 114 G P +R I+ LKG++GE G G G+ G GP G G +G G KG G PG + Sbjct: 55 GAPGIRT--GIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQ 112 Query: 115 AYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV-HTW 173 AFS RR + V FDT + N + + +GRF+CTVPG Y+ + V W Sbjct: 113 PRPAFSAIRRNPPMGGN---VVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQW 169 Query: 174 NYKETYLHIMLNRRPAAVLYAQPSERSVMQAQS--LMLLLAAGDAVWVRMFQRDRDNAIY 231 + + + ++ + + + + Q S ++L L GD VWV ++D Sbjct: 170 EICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWV---EKDPKKGHI 226 Query: 232 GEHGDLYITFSGHLVKPAA 250 + + FSG L+ P+A Sbjct: 227 YQGSEADSVFSGFLIFPSA 245 Score = 34.7 bits (78), Expect = 0.081 Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 78 RGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 R G+ G+ G PG RG G +G++G+ G PG Sbjct: 27 RAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPG 58 Score = 31.6 bits (70), Expect = 0.69 Identities = 14/26 (53%), Positives = 17/26 (65%) Query: 85 GKEGPPGARGLQGRRGQKGQVGPPGA 110 GK+G G G +GR G KG+ G PGA Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGA 56 >gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo sapiens] Length = 333 Score = 82.0 bits (201), Expect = 4e-16 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHS 129 G G+ G +G AG +G +G PG RG++G +G +G+ G G +AF+VG Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214 Query: 130 SDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPA 189 + FD L N +D AAG+F C + GVY+ + ++ ++ + + L + Sbjct: 215 PSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRN---VQVSLVKNGV 271 Query: 190 AVLYAQPSERSVMQAQS--LMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLV 246 +L+ + + S S ++L L GD VW+++ +R N ++ + D TF+G L+ Sbjct: 272 KILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDD-DTTFTGFLL 329 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%) Query: 63 IDIEILKGEKGEAGVRGRAGRSGKEGPPGARGL------QGRRGQKGQVGPPG 109 ++ + +KG++G G G+ G G GP G +GL QG++G KG VGP G Sbjct: 82 VEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTG 134 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/40 (47%), Positives = 23/40 (57%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GEKGE G G+ G +G G+RG G+ G KG GP G Sbjct: 71 GEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMG 110 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 15/58 (25%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGL---------------QGRRGQKGQVGPPGAA 111 KG+KG+AG GR G GK+G G +G QG RG G+ GP G A Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLA 106 Score = 37.7 bits (86), Expect = 0.010 Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G G G +G G +G+ G PG+ G G G+KG+ G G Sbjct: 39 LPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80 Score = 34.3 bits (77), Expect = 0.11 Identities = 16/41 (39%), Positives = 23/41 (56%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 +G G G G G G++G GA+G +G G+ G+ G PG Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPG 65 >gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo sapiens] Length = 333 Score = 78.6 bits (192), Expect = 5e-15 Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHS 129 G G+ G +G AG +G +G PG RG++G +G +G+ G G +AF+VG Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214 Query: 130 SDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPA 189 + FD L N +D A G+F C + GVY+ + ++ ++ + + L + Sbjct: 215 PSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFSRN---VQVSLVKNGV 271 Query: 190 AVLYAQPSERSV--MQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLV 246 +L+ + + S + S++L L GD +W+++ +R N ++ + D TF+G L+ Sbjct: 272 KILHTRDAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADEDD-DTTFTGFLL 329 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%) Query: 63 IDIEILKGEKGEAGVRGRAGRSGKEGPPGARGL------QGRRGQKGQVGPPG 109 ++ + +KG++G G G+ G G GP G +GL QG++G KG VGP G Sbjct: 82 VEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTG 134 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/40 (47%), Positives = 23/40 (57%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GEKGE G G+ G +G G+RG G+ G KG GP G Sbjct: 71 GEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMG 110 Score = 38.1 bits (87), Expect = 0.007 Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAA 111 G+ G +G +G G GK G +G QG RG G+ GP G A Sbjct: 65 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLA 106 Score = 37.4 bits (85), Expect = 0.013 Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G G G +G G +G+ G PG+ G G G+KG+ G G Sbjct: 39 LPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80 Score = 32.7 bits (73), Expect = 0.31 Identities = 16/41 (39%), Positives = 22/41 (53%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 +G G G G G G++G GA+G +G G+ G G PG Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPG 65 >gi|56786155 complement component 1, q subcomponent, C chain precursor [Homo sapiens] Length = 245 Score = 78.2 bits (191), Expect = 6e-15 Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 41/257 (15%) Query: 6 LLLLALLLP-----------VGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWR 54 LLLL LLLP + PGLP P PGP + Sbjct: 15 LLLLLLLLPLRGQANTGCYGIPGMPGLPGAPGKDGYDGL--PGP---------------K 57 Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRR 114 G P + I KG+KGE G+ G G++G GPPG G+ G G G+ G G ++ Sbjct: 58 GEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQK 117 Query: 115 AYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV-HTW 173 + F+V R+ + + + F+ L N G +D + G+F C VPG+Y+ + HT Sbjct: 118 FQSVFTVTRQTHQPPAPN-SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTA 176 Query: 174 NYKETYLHIMLNRRPAAVL--YAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIY 231 N L ++L R V+ S+ + + + ++L L G+ VW+ + I Sbjct: 177 N-----LCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQ 231 Query: 232 GEHGDLYITFSGHLVKP 248 G FSG L+ P Sbjct: 232 GSDS----VFSGFLLFP 244 >gi|166235903 complement component 1, q subcomponent, C chain precursor [Homo sapiens] Length = 245 Score = 78.2 bits (191), Expect = 6e-15 Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 41/257 (15%) Query: 6 LLLLALLLP-----------VGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWR 54 LLLL LLLP + PGLP P PGP + Sbjct: 15 LLLLLLLLPLRGQANTGCYGIPGMPGLPGAPGKDGYDGL--PGP---------------K 57 Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRR 114 G P + I KG+KGE G+ G G++G GPPG G+ G G G+ G G ++ Sbjct: 58 GEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQK 117 Query: 115 AYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV-HTW 173 + F+V R+ + + + F+ L N G +D + G+F C VPG+Y+ + HT Sbjct: 118 FQSVFTVTRQTHQPPAPN-SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTA 176 Query: 174 NYKETYLHIMLNRRPAAVL--YAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIY 231 N L ++L R V+ S+ + + + ++L L G+ VW+ + I Sbjct: 177 N-----LCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQ 231 Query: 232 GEHGDLYITFSGHLVKP 248 G FSG L+ P Sbjct: 232 GSDS----VFSGFLLFP 244 >gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo sapiens] Length = 330 Score = 77.4 bits (189), Expect = 1e-14 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 19/189 (10%) Query: 70 GEKGEAGVRGRAG---------RSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS 120 G KG+AG GRAG GK G PG +G +G++G+ G GP +AFS Sbjct: 139 GPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFS 198 Query: 121 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL 180 V + + FD L+N G ++ ++G+F+C VPG+Y+ + ++ N K + Sbjct: 199 VAVTKSYPRER--LPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLAN-KHLAI 255 Query: 181 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT 240 ++ N + + + + + S +L L GD VW+++F +++ Y D Y T Sbjct: 256 GLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFY----DPYWT 311 Query: 241 ---FSGHLV 246 F+G L+ Sbjct: 312 DSLFTGFLI 320 Score = 29.6 bits (65), Expect = 2.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 85 GKEGPPGARGLQGRRGQKGQVGPPG 109 G +GPPG G G G G++G PG Sbjct: 85 GPQGPPGPPGAPGPSGMMGRMGFPG 109 >gi|14149712 C1q and tumor necrosis factor related protein 5 precursor [Homo sapiens] Length = 243 Score = 76.6 bits (187), Expect = 2e-14 Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 14/185 (7%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAY---AAFSVGRREG 126 G G G G G G+ G PG RG G RG+ G GP G A + +AFS R E Sbjct: 54 GRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSES 113 Query: 127 LHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNR 186 +PFD LVN G +D G+F C VPGVY+ + VH Y+ + ++ Sbjct: 114 RVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFA--VHATVYRASLQFDLVKN 171 Query: 187 RPAAVLYAQ-----PSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITF 241 + + Q P S+ + M+ L D VWV++ D D TF Sbjct: 172 GESIASFFQFFGGWPKPASL--SGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTD--STF 227 Query: 242 SGHLV 246 SG LV Sbjct: 228 SGFLV 232 >gi|13569919 C1q and tumor necrosis factor related protein 3 isoform a [Homo sapiens] Length = 246 Score = 75.5 bits (184), Expect = 4e-14 Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 16/187 (8%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAA------FSV 121 + G G G G G G +G G +G G RG++GQ GP G + Y + Sbjct: 64 IPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKG---EKGYPGIPPELQIAF 120 Query: 122 GRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTW-NYKETYL 180 H S+ + F + N+ FD+ GRF V GVYF + ++ + +E Y+ Sbjct: 121 MASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYV 180 Query: 181 HIMLNRRPAAVLYA-QPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYI 239 ++M N +Y+ + +S + +L LA GD VW+RM + A++G+H + Sbjct: 181 YLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDH-QRFS 235 Query: 240 TFSGHLV 246 TF+G L+ Sbjct: 236 TFAGFLL 242 >gi|62739183 C1q and tumor necrosis factor related protein 3 isoform b [Homo sapiens] Length = 319 Score = 75.5 bits (184), Expect = 4e-14 Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 16/187 (8%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAA------FSV 121 + G G G G G G +G G +G G RG++GQ GP G + Y + Sbjct: 137 IPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKG---EKGYPGIPPELQIAF 193 Query: 122 GRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTW-NYKETYL 180 H S+ + F + N+ FD+ GRF V GVYF + ++ + +E Y+ Sbjct: 194 MASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYV 253 Query: 181 HIMLNRRPAAVLYA-QPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYI 239 ++M N +Y+ + +S + +L LA GD VW+RM + A++G+H + Sbjct: 254 YLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDH-QRFS 308 Query: 240 TFSGHLV 246 TF+G L+ Sbjct: 309 TFAGFLL 315 >gi|154937344 complement component 1, q subcomponent-like 2 [Homo sapiens] Length = 287 Score = 72.4 bits (176), Expect = 4e-13 Identities = 76/290 (26%), Positives = 120/290 (41%), Gaps = 46/290 (15%) Query: 1 MAAPALLLLALLL---PVGAWPGLPRRPCVHCCRP------AWPPGPYARVSDRDLWRGD 51 MA L+ + LLL P GA C C P PPG A+ + Sbjct: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60 Query: 52 LWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG-- 109 + + L P I+ KG+ G G G G G+ GPPG RG G +G G+ G PG Sbjct: 61 VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ 120 Query: 110 ---------------------------AACRRAYAAFSVGRREGLHSS-DHFQAVPFDTE 141 +A ++ + GL S + ++ + FD Sbjct: 121 LTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDV 180 Query: 142 LVNLDGAFDLAAGRFLCTVPGVYFLSLNV--HTWNYKETYLHIMLNRRPAAVLYAQPSER 199 + NL +D G+F C V G+YF + ++ + + + N + A AQ +++ Sbjct: 181 VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ 240 Query: 200 SVMQA-QSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKP 248 + A S++L L +GD V+V++ D A +G + + Y TFSG L+ P Sbjct: 241 NYDYASNSVVLHLDSGDEVYVKL---DGGKA-HGGNNNKYSTFSGFLLYP 286 >gi|122937273 hypothetical protein LOC131149 [Homo sapiens] Length = 477 Score = 71.2 bits (173), Expect = 8e-13 Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 64/227 (28%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPP------------------- 108 +KGEKG G G G+SG+ G PGA+G G +G+KG++GPP Sbjct: 261 MKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDIGNKGVRG 320 Query: 109 --------------GAACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAG 154 G R +AFS G + + + F+ L N G + G Sbjct: 321 PTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPN--IPIKFEKILYNDQGNYSPVTG 378 Query: 155 RFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAV-LYAQPSE----------RSVMQ 203 +F C++PG Y S HI + RPA + L AQ + + + Q Sbjct: 379 KFNCSIPGTYVFS------------YHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQ 426 Query: 204 AQSLMLL-LAAGDAVWVRMFQRDRD-NAIYGEHGDLYITFSGHLVKP 248 A L++L L+AGD VW+ + +D N +Y D I F+G L+ P Sbjct: 427 ASLLVILKLSAGDQVWLEV---SKDWNGVYVSAEDDSI-FTGFLLYP 469 Score = 44.3 bits (103), Expect = 1e-04 Identities = 21/40 (52%), Positives = 24/40 (60%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GE G+ G +G AG G GPPG G QG RG KG+ G G Sbjct: 116 GETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKG 155 Score = 43.5 bits (101), Expect = 2e-04 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGR---RGQKGQVGPPGAAC 112 LKGE+G+ GV G G+ G +G PG +G +G G KGQ G G C Sbjct: 153 LKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTC 200 Score = 42.4 bits (98), Expect = 4e-04 Identities = 21/41 (51%), Positives = 24/41 (58%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGEKG G RG G G G PGA+G G +G KG +G G Sbjct: 148 KGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGG 188 Score = 41.6 bits (96), Expect = 7e-04 Identities = 30/94 (31%), Positives = 37/94 (39%), Gaps = 19/94 (20%) Query: 26 CVHCCRPA----------WPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEA 75 C CC P PGP G+L G+P + + +G KGE Sbjct: 101 CCDCCSPVPGQKGEPGETGQPGPKGEA-------GNL--GIPGPPGVVGPQGPRGYKGEK 151 Query: 76 GVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G++G G G G PG G QG G KG G G Sbjct: 152 GLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIG 185 Score = 41.2 bits (95), Expect = 9e-04 Identities = 18/38 (47%), Positives = 24/38 (63%) Query: 72 KGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGE G +G G G G PGA+G +G G+KG++G G Sbjct: 205 KGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKG 242 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/41 (41%), Positives = 25/41 (60%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGA 110 G+ GE G +G+ G G +G G++G G G+ G+ G PGA Sbjct: 245 GDSGERGGKGQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGA 285 Score = 37.0 bits (84), Expect = 0.016 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 68 LKGEKGEAG------VRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 +KG+KG G +G G G G PG G G +G+KG++G G Sbjct: 189 VKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKG 236 Score = 36.2 bits (82), Expect = 0.028 Identities = 18/40 (45%), Positives = 22/40 (55%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G KGE G G G G +G G G +G +GQKG+ G G Sbjct: 224 GAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGGMKG 263 Score = 35.8 bits (81), Expect = 0.037 Identities = 15/41 (36%), Positives = 23/41 (56%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KG+KG G+ G G+ G +G +G +G +G +G PG Sbjct: 178 KGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPG 218 Score = 35.0 bits (79), Expect = 0.062 Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G G G +G G G+ G G G G RG KGQ G G Sbjct: 219 LHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGG 260 Score = 29.3 bits (64), Expect = 3.4 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Query: 77 VRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAV 136 V G+ G G+ G PG +G G G G G G R Y +GL Q V Sbjct: 108 VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKG-----EKGLKGERGDQGV 162 Query: 137 P 137 P Sbjct: 163 P 163 >gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] Length = 680 Score = 70.5 bits (171), Expect = 1e-12 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 38/212 (17%) Query: 70 GEKGEAGV--RGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAA--FSVGRRE 125 G G AG+ +G G +G GPPG RG G G G GPPG + G+R Sbjct: 473 GPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRP 532 Query: 126 GLHSSDHFQA--------------------------VPFDTELVNLDGAFDLAAGRFLCT 159 L + A +PFD L N +D G F C Sbjct: 533 SLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQ 592 Query: 160 VPGVYFLSLNVHTWNYKETYLHIML--NRRPAAVLYAQPSERSVMQAQ-SLMLLLAAGDA 216 +PG+Y+ S +VH K T++ + L N P Y + ++ + QA S ++ L D Sbjct: 593 IPGIYYFSYHVHV---KGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQ 649 Query: 217 VWVRMFQRDRDNAIYGEHGDLYITFSGHLVKP 248 VW+++ + + E+ ++ +FSG LV P Sbjct: 650 VWLQLPNAESNGLYSSEY--VHSSFSGFLVAP 679 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/42 (47%), Positives = 25/42 (59%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 LKGE+G AG+ G G G++GP G G G G G +GP G Sbjct: 306 LKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQG 347 Score = 43.9 bits (102), Expect = 1e-04 Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGP---PGARGLQGRRGQKGQVGPPGAA 111 GLP + + G GEAG RG G G GP PG G G +G G GPPG A Sbjct: 419 GLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPA 478 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/42 (47%), Positives = 24/42 (57%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G KG+ GV G G G GP GA+G+ G G+ G G PG Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPG 446 Score = 42.4 bits (98), Expect = 4e-04 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 70 GEKGEAGVRGRAGRSGK-----EGPPGARGLQGRRGQKGQVGPPGAACR 113 GEKG GV G G+ G+ G PG RGL G +G G GPPG R Sbjct: 174 GEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKR 222 Score = 41.2 bits (95), Expect = 9e-04 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Query: 69 KGEKGEAGVRGRAGRSGK---EGPPGARGLQGRRGQKGQVGPPG 109 KGE+G G G+ G GK +GP G GL G +G G GPPG Sbjct: 376 KGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPG 419 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAA 111 G+ G G RG G G GPPG +G G RG +G +G PGAA Sbjct: 229 GQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEG-IGKPGAA 269 Score = 40.8 bits (94), Expect = 0.001 Identities = 20/40 (50%), Positives = 22/40 (55%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G KGE G G G+ G GPPG G QG +G G G PG Sbjct: 320 GAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPG 359 Score = 40.4 bits (93), Expect = 0.001 Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 17/116 (14%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLW--RGDLW-RGLPRVRPTIDIEILKGEKGEA 75 PGLP P PG + +R + +GD+ GLP R G G Sbjct: 94 PGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPR---------GPPGPP 144 Query: 76 GVRGRAGRS-----GKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREG 126 G+ G AG S G++GP GA G +G G+KG G PG ++ + R G Sbjct: 145 GIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPG 200 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 69 KGEKGEAGVRGRAGRSGK------EGPPGARGLQGRRGQKGQVGPPGAA 111 KGE+G AG+ G+ G +G +GP G G G G KG+ GP G A Sbjct: 322 KGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPA 370 Score = 39.7 bits (91), Expect = 0.003 Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEG--P 89 P PPGP +R G G P + G KG G G AG G G Sbjct: 245 PIGPPGPQGPPGER----GPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGK 300 Query: 90 PGARGLQGRRGQKGQVGPPGA 110 PG GL+G RG G G PGA Sbjct: 301 PGLPGLKGERGPAGLPGGPGA 321 Score = 39.3 bits (90), Expect = 0.003 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 +KG++G G G G G +GPPG RG +G G+ G G PG Sbjct: 233 IKGDRGFPGEMGPIGPPGPQGPPGERGPEG-IGKPGAAGAPG 273 Score = 38.9 bits (89), Expect = 0.004 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 9/57 (15%) Query: 54 RGLPRVR-PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 RGLP + PT G G GV G+ G +G G PG +G +G G+ G +GPPG Sbjct: 202 RGLPGPQGPT-------GPSGPPGV-GKRGENGVPGQPGIKGDRGFPGEMGPIGPPG 250 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/41 (46%), Positives = 22/41 (53%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGE G AG G G G+ G PG+ G G G+ G GP G Sbjct: 361 KGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKG 401 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/40 (47%), Positives = 20/40 (50%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G G RG G GK G PG GL G +G G GP G Sbjct: 371 GYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKG 410 Score = 38.5 bits (88), Expect = 0.006 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%) Query: 54 RGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQG--------RRGQKGQV 105 RG P + + + G+KGE G G GR G+ G PG +G G +RG+ G Sbjct: 170 RGFPGEKGAPGVPGMNGQKGEMGY-GAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVP 228 Query: 106 GPPGAACRRAY 116 G PG R + Sbjct: 229 GQPGIKGDRGF 239 Score = 38.1 bits (87), Expect = 0.007 Identities = 18/41 (43%), Positives = 21/41 (51%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KG G G+ G G +G GP G G +G RG G G PG Sbjct: 349 KGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPG 389 Score = 37.7 bits (86), Expect = 0.010 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G AG RG G SG G PG G G +G+ G GPPG Sbjct: 63 GPPGPAGPRGHPGPSGPPGKPGY-GSPGLQGEPGLPGPPG 101 Score = 37.7 bits (86), Expect = 0.010 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRR---GQKGQVGPPG 109 G+ G G++G G +G G PGA+G QG G+ G GPPG Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341 Score = 37.0 bits (84), Expect = 0.016 Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 + G G G +G G +G G PGA+G +G G G+ G PG Sbjct: 351 IPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPG 392 Score = 35.4 bits (80), Expect = 0.048 Identities = 18/41 (43%), Positives = 21/41 (51%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGA 110 G G+ G+ G G G GP G G+ G G G VGP GA Sbjct: 389 GYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGA 429 Score = 34.3 bits (77), Expect = 0.11 Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAY 116 G +G G+ G G G +G G G G G KG+ G PG+ + Y Sbjct: 344 GPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGY 390 Score = 31.2 bits (69), Expect = 0.90 Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 85 GKEGPPGARGLQGRRGQKGQVGPPG 109 G++G PG G G RG G GPPG Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPG 81 Score = 30.8 bits (68), Expect = 1.2 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 56 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVG 106 LP + I KG A VRG G G GP G RG G G G+ G Sbjct: 35 LPNTKTQFFIPYTIKSKGIA-VRGEQGTPGPPGPAGPRGHPGPSGPPGKPG 84 Score = 30.8 bits (68), Expect = 1.2 Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 82 GRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G GPPG G +G G G G PG Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGKPG 84 >gi|13994280 C1q and tumor necrosis factor related protein 7 isoform b [Homo sapiens] Length = 289 Score = 69.3 bits (168), Expect = 3e-12 Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 47/256 (18%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PGLP P + PGP+ R+ GLP R D KGEKGE G Sbjct: 37 PGLPGPPGPPGANGS--PGPHGRI------------GLPG-RDGRDGR--KGEKGEKGTA 79 Query: 79 GRAGRSGKEGPPGARGLQGRRGQKGQVGPPG--------------------------AAC 112 G G++G G G +G QG G+KG +GP G C Sbjct: 80 GLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 139 Query: 113 RRAYAAFSVGRREGLHSSDHFQAVP--FDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV 170 R G+ +S + +P F+ L N ++ A G+F+C PG+Y+ S ++ Sbjct: 140 RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDI 199 Query: 171 HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAI 230 N K + ++ N + + + + + S ++ L D VW+ +F D+ N + Sbjct: 200 TLAN-KHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQ-NGL 257 Query: 231 YGEHGDLYITFSGHLV 246 + + G FSG L+ Sbjct: 258 FSDPGWADSLFSGFLL 273 >gi|206597454 C1q and tumor necrosis factor related protein 7 isoform b [Homo sapiens] Length = 289 Score = 69.3 bits (168), Expect = 3e-12 Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 47/256 (18%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PGLP P + PGP+ R+ GLP R D KGEKGE G Sbjct: 37 PGLPGPPGPPGANGS--PGPHGRI------------GLPG-RDGRDGR--KGEKGEKGTA 79 Query: 79 GRAGRSGKEGPPGARGLQGRRGQKGQVGPPG--------------------------AAC 112 G G++G G G +G QG G+KG +GP G C Sbjct: 80 GLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 139 Query: 113 RRAYAAFSVGRREGLHSSDHFQAVP--FDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV 170 R G+ +S + +P F+ L N ++ A G+F+C PG+Y+ S ++ Sbjct: 140 RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDI 199 Query: 171 HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAI 230 N K + ++ N + + + + + S ++ L D VW+ +F D+ N + Sbjct: 200 TLAN-KHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQ-NGL 257 Query: 231 YGEHGDLYITFSGHLV 246 + + G FSG L+ Sbjct: 258 FSDPGWADSLFSGFLL 273 >gi|206597452 C1q and tumor necrosis factor related protein 7 isoform a [Homo sapiens] Length = 296 Score = 69.3 bits (168), Expect = 3e-12 Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 47/256 (18%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PGLP P + PGP+ R+ GLP R D KGEKGE G Sbjct: 44 PGLPGPPGPPGANGS--PGPHGRI------------GLPG-RDGRDGR--KGEKGEKGTA 86 Query: 79 GRAGRSGKEGPPGARGLQGRRGQKGQVGPPG--------------------------AAC 112 G G++G G G +G QG G+KG +GP G C Sbjct: 87 GLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 146 Query: 113 RRAYAAFSVGRREGLHSSDHFQAVP--FDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV 170 R G+ +S + +P F+ L N ++ A G+F+C PG+Y+ S ++ Sbjct: 147 RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDI 206 Query: 171 HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAI 230 N K + ++ N + + + + + S ++ L D VW+ +F D+ N + Sbjct: 207 TLAN-KHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQ-NGL 264 Query: 231 YGEHGDLYITFSGHLV 246 + + G FSG L+ Sbjct: 265 FSDPGWADSLFSGFLL 280 >gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] Length = 703 Score = 67.0 bits (162), Expect = 1e-11 Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 41/231 (17%) Query: 54 RGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAAC- 112 +GLP ++ + GE G AG G AG +G G PG+ G+ G G G GPPGA Sbjct: 477 QGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGA 535 Query: 113 ----------------------RRAYAAFSVGRREGLHSSDHFQAV------------PF 138 + F +G H++ F AV F Sbjct: 536 FDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSA-HATPAFTAVLTSPFPASGMPVKF 594 Query: 139 DTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSE 198 D L N ++ A G F C V GVY+ + +VH ++ + N PA Y + + Sbjct: 595 DRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHV-KGTNVWVALYKNNVPATYTYDEYKK 653 Query: 199 RSVMQAQ-SLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKP 248 + QA +L L D VWV+M D+ N +Y ++ +FSG L+ P Sbjct: 654 GYLDQASGGAVLQLRPNDQVWVQM-PSDQANGLYSTE-YIHSSFSGFLLCP 702 Score = 42.4 bits (98), Expect = 4e-04 Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRR---GQKGQVGPPG 109 GE GE G +G G G G PG+ GL GRR G KG+ GP G Sbjct: 343 GEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGG 385 Score = 41.6 bits (96), Expect = 7e-04 Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 20/96 (20%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PGL +P PA PPG ++R+ G P + + G +GE G+R Sbjct: 105 PGLHGQP-----GPAGPPG-FSRMGKA---------GPPGLPGKVGPPGQPGLRGEPGIR 149 Query: 79 GRAGRSGKEGPPGARG-----LQGRRGQKGQVGPPG 109 G G G GPPG G + G+ G +G GPPG Sbjct: 150 GDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPG 185 Score = 41.2 bits (95), Expect = 9e-04 Identities = 20/43 (46%), Positives = 23/43 (53%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAA 111 +GE GE G G G G GPPG G G G++G GP G A Sbjct: 339 RGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEA 381 Score = 41.2 bits (95), Expect = 9e-04 Identities = 19/40 (47%), Positives = 23/40 (57%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GE+G G+ G G G G PG RG G +G+ G GPPG Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG 388 Score = 41.2 bits (95), Expect = 9e-04 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 17/95 (17%) Query: 15 VGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGE 74 +G PGLP + R PPGP +G+ G P P I +G++G Sbjct: 356 LGGPPGLPGSAGLPGRRG--PPGP----------KGEAGPGGPPGVPGI-----RGDQGP 398 Query: 75 AGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 +G+ G+ G G+ G PGA G G G KG+ G G Sbjct: 399 SGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTG 433 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGA 110 +G G G +G G G+ GPPG RGL+G G GQ G PGA Sbjct: 178 QGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNG-VGQPGLPGA 218 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/34 (52%), Positives = 21/34 (61%) Query: 76 GVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GV G AG G +GP GA+G G RG G +GP G Sbjct: 281 GVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTG 314 Score = 40.0 bits (92), Expect = 0.002 Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G++GE G G G G +G G GL G G G+ GPPG Sbjct: 335 LLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376 Score = 39.7 bits (91), Expect = 0.003 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 54 RGLPRVRPTIDIEILKGEKGEAGVRGRAG-----RSGKEGPPGARGLQGRRGQKGQVGPP 108 RG P +R + L+G G G+ G +G + G +G PG G QG G +G+ GPP Sbjct: 143 RGEPGIRGD---QGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPP 199 Query: 109 G 109 G Sbjct: 200 G 200 Score = 39.7 bits (91), Expect = 0.003 Identities = 18/40 (45%), Positives = 22/40 (55%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G+ G G+ G G G+ GPPG G +G G G GPPG Sbjct: 237 GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPG 276 Score = 39.7 bits (91), Expect = 0.003 Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G+ G G G G G GP G +GL G +G+ G GPPG Sbjct: 452 LPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPG 493 Score = 39.3 bits (90), Expect = 0.003 Identities = 20/43 (46%), Positives = 25/43 (58%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAA 111 KG++G AGV G G G+ G G G QG +G G G PG+A Sbjct: 324 KGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSA 366 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 L G KG+ G G G G G PG G G +G +G GPPG Sbjct: 320 LPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPG 361 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/40 (47%), Positives = 24/40 (60%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G+ G+RG +G G +GP G G QG G KG+ G PG Sbjct: 451 GLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPG 490 Score = 38.5 bits (88), Expect = 0.006 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 72 KGEAGVRGRAGRSGKEGPPG-----ARGLQGRRGQKGQVGPPG 109 KGE G G+ G G GPPG G G GQ G GPPG Sbjct: 76 KGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG 118 Score = 38.5 bits (88), Expect = 0.006 Identities = 18/45 (40%), Positives = 22/45 (48%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRR 114 G G G G G +G GPPG G++G +G G G PG R Sbjct: 367 GLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411 Score = 38.1 bits (87), Expect = 0.007 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PG P +P P PPGP + + L G P + G+ G G+ Sbjct: 79 PGPPGKP-----GPRGPPGPPGFPGKPGMGKPGL-HGQPGPAGPPGFSRM-GKAGPPGLP 131 Query: 79 GRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G+ G G+ G G G++G +G +G GPPG Sbjct: 132 GKVGPPGQPGLRGEPGIRGDQGLRGPPGPPG 162 Score = 38.1 bits (87), Expect = 0.007 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 13/55 (23%) Query: 68 LKGEKG--EAGVRGRAGRSGKEGP-----------PGARGLQGRRGQKGQVGPPG 109 LKG+ G + G+ G G+ G GP PG GL G G KG+ GPPG Sbjct: 204 LKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPG 258 Score = 37.7 bits (86), Expect = 0.010 Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 11/52 (21%) Query: 69 KGEKGEAGVRGRAGRSGKEGP-----------PGARGLQGRRGQKGQVGPPG 109 KGE G GV G G G GP PGA GL G +G G G PG Sbjct: 251 KGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPG 302 Score = 36.6 bits (83), Expect = 0.021 Identities = 16/40 (40%), Positives = 21/40 (52%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G G +G G +G+ G PG G G++G G G PG Sbjct: 418 GPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPG 457 Score = 35.8 bits (81), Expect = 0.037 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQ--VGPPG 109 + G+ G GV G G G+ GP G G G RG KG VG PG Sbjct: 171 IPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPG 214 Score = 35.8 bits (81), Expect = 0.037 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 14/54 (25%) Query: 70 GEKGEAGVRGRAGR--------------SGKEGPPGARGLQGRRGQKGQVGPPG 109 G KGE G RG G G GP G GL G RG+ G+ G PG Sbjct: 296 GAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPG 349 Score = 35.4 bits (80), Expect = 0.048 Identities = 19/40 (47%), Positives = 20/40 (50%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G KGE G GR G G G G +G G GQ G GP G Sbjct: 424 GPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG 463 Score = 35.0 bits (79), Expect = 0.062 Identities = 18/40 (45%), Positives = 20/40 (50%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G GV G G+ G G PG GL+G G G GP G Sbjct: 433 GRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAG 472 Score = 34.7 bits (78), Expect = 0.081 Identities = 18/40 (45%), Positives = 20/40 (50%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G AG G+ G G G PG RG G G +G GP G Sbjct: 436 GGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIG 475 Score = 34.7 bits (78), Expect = 0.081 Identities = 18/40 (45%), Positives = 20/40 (50%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G+ G G G+ G GP G GLQG G G G PG Sbjct: 442 GALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPG 481 Score = 34.3 bits (77), Expect = 0.11 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 14/54 (25%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGAR--------------GLQGRRGQKGQVGPPG 109 G G AG+ G G SG +G PG R GL G +G +G G PG Sbjct: 281 GVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPG 334 Score = 34.3 bits (77), Expect = 0.11 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQ------KGQVGPPGAA 111 +G G G+ G AG G+ GPPG +G G G +G GP G A Sbjct: 354 QGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLA 402 Score = 33.5 bits (75), Expect = 0.18 Identities = 22/56 (39%), Positives = 25/56 (44%) Query: 54 RGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 RGLP KGE G G G G +G G G GL G+ G +G G PG Sbjct: 411 RGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466 Score = 32.7 bits (73), Expect = 0.31 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAA 111 +GE G G RG G +G G PG G G+ G G G PG A Sbjct: 193 QGEPGPPGDRGLKGDNGV-GQPGLPGAPGQGGAPGPPGLPGPA 234 Score = 31.6 bits (70), Expect = 0.69 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 7/46 (15%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGAR------GLQGRRGQKGQVGPPG 109 G G AG+ G+ G G G PG + G+ G RG+ G VGP G Sbjct: 229 GLPGPAGL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKG 273 >gi|87298828 complement component 1, q subcomponent, B chain precursor [Homo sapiens] Length = 253 Score = 61.6 bits (148), Expect = 6e-10 Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 25/202 (12%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGP------PGAACRRAYA---- 117 +KGEKG G+ G G G++G PG G G+ G KG +GP PGA + + Sbjct: 58 IKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYK 117 Query: 118 -----AFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHT 172 AFS R + Q + FD + N++ ++ +G+F C VPG+Y+ + H Sbjct: 118 ATQKIAFSATRTINV-PLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFT--YHA 174 Query: 173 WNYKETYLHIMLNRRPA--AVLYAQPSERSV-MQAQSLMLLLAAGDAVWVRMFQRDRDNA 229 + +++M R A V + + + + ++L L G+ V++ Q N+ Sbjct: 175 SSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFL---QATDKNS 231 Query: 230 IYGEHGDLYITFSGHLVKPAAE 251 + G G I FSG L+ P E Sbjct: 232 LLGMEGANSI-FSGFLLFPDME 252 Score = 28.1 bits (61), Expect = 7.6 Identities = 17/47 (36%), Positives = 21/47 (44%) Query: 65 IEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAA 111 I+I + + G G G G PG G G G KG+ G PG A Sbjct: 22 IDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLA 68 >gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] Length = 744 Score = 61.6 bits (148), Expect = 6e-10 Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 38/214 (17%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPP-----------------GAAC 112 G+ G AG+ G G+ G GP G GL G G G GPP G Sbjct: 533 GKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGI 592 Query: 113 RRAYAAFSVGRREGLHSSDHFQAVPFDTELV-----------------NLDGAFDLAAGR 155 + G ++G + ++ F EL N ++ G Sbjct: 593 DGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGI 652 Query: 156 FLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQ-SLMLLLAAG 214 F C VPGVY+ + +VH ++ + N P Y + + + QA S +LLL G Sbjct: 653 FTCEVPGVYYFAYHVHC-KGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPG 711 Query: 215 DAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKP 248 D V+++M G++ ++ +FSG+L+ P Sbjct: 712 DRVFLQMPSEQAAGLYAGQY--VHSSFSGYLLYP 743 Score = 45.8 bits (107), Expect = 4e-05 Identities = 20/40 (50%), Positives = 25/40 (62%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G KGE G+ G G G +G PG +G G+ G G+VGPPG Sbjct: 411 GPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPG 450 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/41 (51%), Positives = 24/41 (58%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGE G G G+ G G+ GPPG RGL G G KG+ G G Sbjct: 428 KGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKG 468 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQ------KGQVGPPGA 110 KG++G GV G G G++GP GA G+ G G+ G +GPPGA Sbjct: 359 KGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGA 406 Score = 39.3 bits (90), Expect = 0.003 Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 18/97 (18%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PGLP P + PGP +GD RG+ V + KG G G+ Sbjct: 339 PGLPGPPGLPGIGKPGFPGP----------KGD--RGMGGVPGALGPRGEKGPIGAPGIG 386 Query: 79 GRAGRSGKEG------PPGARGLQGRRGQKGQVGPPG 109 G G G G PPGA G G +G+ G VGP G Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQG 423 Score = 38.5 bits (88), Expect = 0.006 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 27/81 (33%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPG 91 P PPGP+ GLP + G+ G G+ G+ G G GP G Sbjct: 195 PQGPPGPH---------------GLPGI----------GKPGGPGLPGQPGPKGDRGPKG 229 Query: 92 ARGLQGRRGQKGQ--VGPPGA 110 G QG RG KG G PGA Sbjct: 230 LPGPQGLRGPKGDKGFGMPGA 250 Score = 38.1 bits (87), Expect = 0.007 Identities = 19/41 (46%), Positives = 23/41 (56%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGE G+ GV G G G GP G G+ G +G +G G PG Sbjct: 461 KGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPG 501 Score = 37.7 bits (86), Expect = 0.010 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 12/84 (14%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPG 91 P PPGP + + G P + ++G G G +G AG+ G G PG Sbjct: 421 PQGPPGPKGEPGLQG------FPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPG 474 Query: 92 ARGLQGRRGQ------KGQVGPPG 109 GL G +G+ +G GPPG Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPG 498 Score = 37.4 bits (85), Expect = 0.013 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 11/78 (14%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPG 91 P PPGP G G+P ++ + G G+ G+ G G+ G G PG Sbjct: 128 PRGPPGP----------PGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPG 176 Query: 92 ARGLQGRRGQKGQVGPPG 109 A+G G++G+ G +G PG Sbjct: 177 AKGEIGQKGEIGPMGIPG 194 Score = 37.4 bits (85), Expect = 0.013 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQ--GRRGQKGQVGPPG 109 G+P + + KGE G+ G G G G +GPPG GL G+ G G G PG Sbjct: 164 GMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPG 220 Score = 37.4 bits (85), Expect = 0.013 Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 30/91 (32%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PG+ P +H PPGP GLP V G+ G G Sbjct: 251 PGVKGPPGMH-----GPPGPV---------------GLPGV----------GKPGVTGFP 280 Query: 79 GRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G GK G PG G QG G G GPPG Sbjct: 281 GPQGPLGKPGAPGEPGPQGPIGVPGVQGPPG 311 Score = 37.4 bits (85), Expect = 0.013 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRG------QKGQVGPPG 109 KG G GV G G G+ G PG +GLQG G G +GPPG Sbjct: 467 KGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPG 513 Score = 37.4 bits (85), Expect = 0.013 Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 + G++G G G G G GP G G+ G +G+ G GPPG Sbjct: 487 IPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPG 528 Score = 37.0 bits (84), Expect = 0.016 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G GE G +G G G +GPPG G+ G+ GQ G G PG Sbjct: 290 GAPGEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPG 328 Score = 36.6 bits (83), Expect = 0.021 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 72 KGEAGVRGRAGRSGKEGPPG--ARGLQGRRGQKGQVGPPG 109 +GE G RG G G GPPG G+ G +G+ G G PG Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPG 156 Score = 35.8 bits (81), Expect = 0.037 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G P + I + ++G G G+ G+ G+ G G PG G +G +G G GPPG Sbjct: 293 GEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346 Score = 34.7 bits (78), Expect = 0.081 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGL-----QGRRGQKGQVGPPGA 110 + G+ G G +G G G GPPG G+ G +G +G G PGA Sbjct: 323 IPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGA 370 Score = 34.3 bits (77), Expect = 0.11 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 69 KGEKGEAGVRGRAGRSG--KEGPPGARGLQGRRGQKGQVGPPG 109 KG G G+RG G G G PG +G G G G VG PG Sbjct: 228 KGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPG 270 Score = 34.3 bits (77), Expect = 0.11 Identities = 21/55 (38%), Positives = 27/55 (49%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GLP V + + G G+ G++G G G GP G G G G KG+ G PG Sbjct: 471 GLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPG 525 Score = 32.3 bits (72), Expect = 0.40 Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 25/98 (25%) Query: 19 PGLPRRPCVHCCR-PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGV 77 PGLP +P R P PGP + GD G+P G GV Sbjct: 213 PGLPGQPGPKGDRGPKGLPGPQGLRGPK----GDKGFGMP---------------GAPGV 253 Query: 78 RGRAGRSGKEGPP-----GARGLQGRRGQKGQVGPPGA 110 +G G G GP G G+ G G +G +G PGA Sbjct: 254 KGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGA 291 Score = 31.6 bits (70), Expect = 0.69 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKG--QVGPPGAA 111 L+G G G+ G +G G G PG +G G G G +G PG A Sbjct: 493 LQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVA 538 Score = 30.8 bits (68), Expect = 1.2 Identities = 16/40 (40%), Positives = 18/40 (45%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G G G G G GP G G +G G +G G PG Sbjct: 402 GPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPG 441 Score = 30.0 bits (66), Expect = 2.0 Identities = 16/40 (40%), Positives = 18/40 (45%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G G G G G GP G G+ G +G G G PG Sbjct: 393 GLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPG 432 >gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] Length = 744 Score = 61.6 bits (148), Expect = 6e-10 Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 38/214 (17%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPP-----------------GAAC 112 G+ G AG+ G G+ G GP G GL G G G GPP G Sbjct: 533 GKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGI 592 Query: 113 RRAYAAFSVGRREGLHSSDHFQAVPFDTELV-----------------NLDGAFDLAAGR 155 + G ++G + ++ F EL N ++ G Sbjct: 593 DGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGI 652 Query: 156 FLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQ-SLMLLLAAG 214 F C VPGVY+ + +VH ++ + N P Y + + + QA S +LLL G Sbjct: 653 FTCEVPGVYYFAYHVHC-KGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPG 711 Query: 215 DAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKP 248 D V+++M G++ ++ +FSG+L+ P Sbjct: 712 DRVFLQMPSEQAAGLYAGQY--VHSSFSGYLLYP 743 Score = 45.8 bits (107), Expect = 4e-05 Identities = 20/40 (50%), Positives = 25/40 (62%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G KGE G+ G G G +G PG +G G+ G G+VGPPG Sbjct: 411 GPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPG 450 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/41 (51%), Positives = 24/41 (58%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGE G G G+ G G+ GPPG RGL G G KG+ G G Sbjct: 428 KGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKG 468 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQ------KGQVGPPGA 110 KG++G GV G G G++GP GA G+ G G+ G +GPPGA Sbjct: 359 KGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGA 406 Score = 39.3 bits (90), Expect = 0.003 Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 18/97 (18%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PGLP P + PGP +GD RG+ V + KG G G+ Sbjct: 339 PGLPGPPGLPGIGKPGFPGP----------KGD--RGMGGVPGALGPRGEKGPIGAPGIG 386 Query: 79 GRAGRSGKEG------PPGARGLQGRRGQKGQVGPPG 109 G G G G PPGA G G +G+ G VGP G Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQG 423 Score = 38.5 bits (88), Expect = 0.006 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 27/81 (33%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPG 91 P PPGP+ GLP + G+ G G+ G+ G G GP G Sbjct: 195 PQGPPGPH---------------GLPGI----------GKPGGPGLPGQPGPKGDRGPKG 229 Query: 92 ARGLQGRRGQKGQ--VGPPGA 110 G QG RG KG G PGA Sbjct: 230 LPGPQGLRGPKGDKGFGMPGA 250 Score = 38.1 bits (87), Expect = 0.007 Identities = 19/41 (46%), Positives = 23/41 (56%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 KGE G+ GV G G G GP G G+ G +G +G G PG Sbjct: 461 KGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPG 501 Score = 37.7 bits (86), Expect = 0.010 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 12/84 (14%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPG 91 P PPGP + + G P + ++G G G +G AG+ G G PG Sbjct: 421 PQGPPGPKGEPGLQG------FPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPG 474 Query: 92 ARGLQGRRGQ------KGQVGPPG 109 GL G +G+ +G GPPG Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPG 498 Score = 37.4 bits (85), Expect = 0.013 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 11/78 (14%) Query: 32 PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPG 91 P PPGP G G+P ++ + G G+ G+ G G+ G G PG Sbjct: 128 PRGPPGP----------PGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPG 176 Query: 92 ARGLQGRRGQKGQVGPPG 109 A+G G++G+ G +G PG Sbjct: 177 AKGEIGQKGEIGPMGIPG 194 Score = 37.4 bits (85), Expect = 0.013 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQ--GRRGQKGQVGPPG 109 G+P + + KGE G+ G G G G +GPPG GL G+ G G G PG Sbjct: 164 GMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPG 220 Score = 37.4 bits (85), Expect = 0.013 Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 30/91 (32%) Query: 19 PGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVR 78 PG+ P +H PPGP GLP V G+ G G Sbjct: 251 PGVKGPPGMH-----GPPGPV---------------GLPGV----------GKPGVTGFP 280 Query: 79 GRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G GK G PG G QG G G GPPG Sbjct: 281 GPQGPLGKPGAPGEPGPQGPIGVPGVQGPPG 311 Score = 37.4 bits (85), Expect = 0.013 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 69 KGEKGEAGVRGRAGRSGKEGPPGARGLQGRRG------QKGQVGPPG 109 KG G GV G G G+ G PG +GLQG G G +GPPG Sbjct: 467 KGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPG 513 Score = 37.4 bits (85), Expect = 0.013 Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 + G++G G G G G GP G G+ G +G+ G GPPG Sbjct: 487 IPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPG 528 Score = 37.0 bits (84), Expect = 0.016 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G GE G +G G G +GPPG G+ G+ GQ G G PG Sbjct: 290 GAPGEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPG 328 Score = 36.6 bits (83), Expect = 0.021 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 72 KGEAGVRGRAGRSGKEGPPG--ARGLQGRRGQKGQVGPPG 109 +GE G RG G G GPPG G+ G +G+ G G PG Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPG 156 Score = 35.8 bits (81), Expect = 0.037 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G P + I + ++G G G+ G+ G+ G G PG G +G +G G GPPG Sbjct: 293 GEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346 Score = 34.7 bits (78), Expect = 0.081 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGL-----QGRRGQKGQVGPPGA 110 + G+ G G +G G G GPPG G+ G +G +G G PGA Sbjct: 323 IPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGA 370 Score = 34.3 bits (77), Expect = 0.11 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 69 KGEKGEAGVRGRAGRSG--KEGPPGARGLQGRRGQKGQVGPPG 109 KG G G+RG G G G PG +G G G G VG PG Sbjct: 228 KGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPG 270 Score = 34.3 bits (77), Expect = 0.11 Identities = 21/55 (38%), Positives = 27/55 (49%) Query: 55 GLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 GLP V + + G G+ G++G G G GP G G G G KG+ G PG Sbjct: 471 GLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPG 525 Score = 32.3 bits (72), Expect = 0.40 Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 25/98 (25%) Query: 19 PGLPRRPCVHCCR-PAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGV 77 PGLP +P R P PGP + GD G+P G GV Sbjct: 213 PGLPGQPGPKGDRGPKGLPGPQGLRGPK----GDKGFGMP---------------GAPGV 253 Query: 78 RGRAGRSGKEGPP-----GARGLQGRRGQKGQVGPPGA 110 +G G G GP G G+ G G +G +G PGA Sbjct: 254 KGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGA 291 Score = 31.6 bits (70), Expect = 0.69 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 68 LKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKG--QVGPPGAA 111 L+G G G+ G +G G G PG +G G G G +G PG A Sbjct: 493 LQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVA 538 Score = 30.8 bits (68), Expect = 1.2 Identities = 16/40 (40%), Positives = 18/40 (45%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G G G G G GP G G +G G +G G PG Sbjct: 402 GPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPG 441 Score = 30.0 bits (66), Expect = 2.0 Identities = 16/40 (40%), Positives = 18/40 (45%) Query: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG 109 G G G G G G GP G G+ G +G G G PG Sbjct: 393 GLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPG 432 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.141 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,417,606 Number of Sequences: 37866 Number of extensions: 591475 Number of successful extensions: 16042 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 184 Number of HSP's successfully gapped in prelim test: 65 Number of HSP's that attempted gapping in prelim test: 2121 Number of HSP's gapped (non-prelim): 6990 length of query: 252 length of database: 18,247,518 effective HSP length: 100 effective length of query: 152 effective length of database: 14,460,918 effective search space: 2198059536 effective search space used: 2198059536 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.