IFIT1 1837

Name: IFIT1	Sequence: fasta or formatted (478aa)		NCBI GI: 116534937
Description: interferon-induced protein with tetratricopeptide repeats 1 isoform 2		Referenced in: Interferon Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 39 2 C cysteine 1.7 8 1 D aspartate 5.0 24 3 E glutamate 10.0 48 2 F phenylalanine 3.8 18 1 G glycine 4.6 22 2 H histidine 3.1 15 2 I isoleucine 4.2 20 2 K lysine 9.2 44 2 L leucine 11.9 57 2 M methionine 2.7 13 1 N asparagine 5.0 24 1 P proline 2.7 13 1 Q glutamine 4.8 23 1 R arginine 5.4 26 2 S serine 5.0 24 2 T threonine 2.7 13 1 V valine 4.6 22 2 W tryptophan 0.8 4 1 Y tyrosine 4.4 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon-induced protein with tetratricopeptide r... IFIT1L 0.670 interferon-induced protein with tetratricopeptide re... IFIT5 0.548 interferon-induced protein with tetratricopeptide rep... IFIT2 0.397 interferon-induced protein with tetratricopeptide r... IFIT3 0.361 interferon-induced protein with tetratricopeptide re... IFIT3 0.361 interferon-induced protein with tetratricopeptide re... OGT 0.036 O-linked GlcNAc transferase isoform 2 OGT 0.036 O-linked GlcNAc transferase isoform 1 TTC13 0.030 tetratricopeptide repeat domain 13 isoform a TTC13 0.027 tetratricopeptide repeat domain 13 isoform b TMTC1 0.026 transmembrane and tetratricopeptide repeat containin... TMTC2 0.024 transmembrane and tetratricopeptide repeat containin... TOMM70A 0.024 translocase of outer mitochondrial membrane 70 homol... CTR9 0.021 SH2 domain binding protein 1 LOC100287898 0.015 PREDICTED: hypothetical protein XP_002342056 TTC28 0.014 tetratricopeptide repeat domain 28 RPAP3 0.013 RNA polymerase II associated protein 3 isoform 2 [H... RPAP3 0.013 RNA polymerase II associated protein 3 isoform 1 [H... MIER1 0.013 mesoderm induction early response 1 isoform g [Homo... MIER1 0.013 mesoderm induction early response 1 isoform a [Homo... MIER1 0.013 mesoderm induction early response 1 isoform f [Homo... MIER1 0.013 mesoderm induction early response 1 isoform e [Homo... MIER1 0.013 mesoderm induction early response 1 isoform d [Homo... MIER1 0.013 mesoderm induction early response 1 isoform c [Homo... MIER1 0.013 mesoderm induction early response 1 isoform b [Homo... MIER1 0.013 mesoderm induction early response 1 isoform a [Homo... CDC16 0.013 anaphase-promoting complex, subunit 6 CDC16 0.013 anaphase-promoting complex, subunit 6 NARG1L 0.013 NMDA receptor regulated 1-like protein isoform 1 [Ho... SGTA 0.013 small glutamine-rich tetratricopeptide Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.