LOC100288554 17186

Name: LOC100288554	Sequence: fasta or formatted (128aa)		NCBI GI: 239742299
Description: PREDICTED: hypothetical protein XP_002342487		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 5 1 C cysteine 5.5 7 2 D aspartate 2.3 3 2 E glutamate 2.3 3 1 F phenylalanine 0.8 1 1 G glycine 6.2 8 1 H histidine 2.3 3 1 I isoleucine 7.8 10 1 K lysine 10.9 14 2 L leucine 14.8 19 3 M methionine 1.6 2 1 N asparagine 2.3 3 1 P proline 10.2 13 2 Q glutamine 2.3 3 1 R arginine 5.5 7 2 S serine 7.0 9 1 T threonine 7.0 9 2 V valine 4.7 6 1 W tryptophan 1.6 2 2 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342487 LOC100293245 1.000 PREDICTED: similar to beta-defensin 130 LOC100290863 1.000 PREDICTED: hypothetical protein XP_002346650 LOC100133267 0.570 PREDICTED: similar to beta-defensin 130 DEFB130 0.570 beta-defensin 130 LOC729523 0.537 PREDICTED: similar to beta-defensin 130 LOC729523 0.537 PREDICTED: similar to beta-defensin 130 LOC729523 0.537 PREDICTED: similar to beta-defensin 130 LOC100287535 0.207 PREDICTED: hypothetical protein XP_002343194 LOC100286963 0.207 PREDICTED: hypothetical protein XP_002342858 LOC100287106 0.202 PREDICTED: hypothetical protein XP_002342470 DEFB103A 0.033 defensin, beta 103A precursor DEFB103B 0.033 beta-defensin 103B precursor DEFB106A 0.029 defensin, beta 106A precursor DEFB106B 0.029 defensin, beta 106B precursor LOC100289462 0.025 PREDICTED: hypothetical protein XP_002342852 DEFB4 0.025 defensin, beta 4 precursor ITGBL1 0.017 integrin, beta-like 1 (with EGF-like repeat domains) ... DEFB117 0.012 PREDICTED: defensin, beta 117 DEFB117 0.012 PREDICTED: defensin, beta 117 DEFB117 0.012 PREDICTED: defensin, beta 117 ADAMTS2 0.012 ADAM metallopeptidase with thrombospondin type 1 mo... DEFB113 0.012 beta-defensin 113 DEFB132 0.008 beta-defensin 32 precursor CD2AP 0.004 CD2-associated protein LOC100287524 0.004 PREDICTED: hypothetical protein XP_002342307 CCDC17 0.004 coiled-coil domain containing 17 DNAH3 0.004 dynein, axonemal, heavy chain 3 LOC388553 0.004 PREDICTED: similar to hCG1645909 LOC388553 0.004 PREDICTED: similar to hCG1645909 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.