Guide to the Human Genome
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Name: SAG Sequence: fasta or formatted (405aa) NCBI GI: 116008178
Description:

S-arrestin

Referenced in:

Photoreceptors and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         27           2
 C cysteine            0.7          3           1
 D aspartate           6.4         26           1
 E glutamate           7.2         29           2
 F phenylalanine       4.0         16           2
 G glycine             4.9         20           1
 H histidine           2.0          8           1
 I isoleucine          4.4         18           2
 K lysine              8.6         35           2
 L leucine             9.1         37           2
 M methionine          1.5          6           1
 N asparagine          3.5         14           2
 P proline             6.4         26           2
 Q glutamine           3.7         15           1
 R arginine            4.0         16           2
 S serine              6.9         28           2
 T threonine           6.4         26           1
 V valine              9.9         40           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   S-arrestin 
ARRB1                 0.551   arrestin beta 1 isoform A 
ARRB1                 0.533   arrestin beta 1 isoform B 
ARRB2                 0.500   arrestin, beta 2 isoform 1 
ARR3                  0.461   arrestin 3, retinal (X-arrestin) 
ARRB2                 0.458   arrestin, beta 2 isoform 2 
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A isof...
HISPPD2A              0.009   histidine acid phosphatase domain containing 2A isof...
TMCO6                 0.008   transmembrane and coiled-coil domains 6 
CREB3L2               0.008   cAMP responsive element binding protein 3-like 2 [Ho...
BIRC6                 0.008   baculoviral IAP repeat-containing 6 
GOT2                  0.006   aspartate aminotransferase 2 precursor 
TCP10                 0.006   t-complex 10 
ARRDC4                0.006   arrestin domain containing 4 
EPN1                  0.005   epsin 1 isoform c 
EPN1                  0.005   epsin 1 isoform a 
HISPPD1               0.005   Histidine acid phosphatase domain containing 1 [Homo...
LOC100294337          0.005   PREDICTED: hypothetical protein XP_002344104 isofor...
LOC100294337          0.005   PREDICTED: hypothetical protein XP_002344105 isofor...
LOC100294337          0.005   PREDICTED: hypothetical protein XP_002344106 isofor...
KIAA1267              0.005   hypothetical protein LOC284058 
CREB3L1               0.005   cAMP responsive element binding protein 3-like 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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