Guide to the Human Genome
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Name: TMEM150A Sequence: fasta or formatted (218aa) NCBI GI: 23503273
Description:

transmembrane protein 150A isoform 2

Referenced in:

Additional Stress Response Functions
p53 Pathway

Other entries for this name:
alt prot [271aa] transmembrane protein 150A isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         27           2
 C cysteine            3.7          8           1
 D aspartate           1.8          4           1
 E glutamate           2.3          5           1
 F phenylalanine       4.1          9           2
 G glycine             7.3         16           1
 H histidine           3.2          7           1
 I isoleucine          4.1          9           1
 K lysine              0.9          2           1
 L leucine            13.3         29           2
 M methionine          1.4          3           1
 N asparagine          1.8          4           1
 P proline             5.5         12           1
 Q glutamine           3.2          7           1
 R arginine            3.2          7           1
 S serine             10.6         23           3
 T threonine           7.3         16           2
 V valine              8.7         19           2
 W tryptophan          1.8          4           1
 Y tyrosine            3.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 150A isoform 2 
TMEM150A              0.812   transmembrane protein 150A isoform 1 
TMEM150B              0.108   transmembrane protein 150B 
FLJ12993              0.084   hypothetical protein LOC441027 
DRAM1                 0.053   DNA-damage regulated autophagy modulator 1 
DRAM2                 0.029   transmembrane protein 77 
SLC27A3               0.010   solute carrier family 27 member 3 
NEDD4                 0.007   neural precursor cell expressed, developmentally do...
GPR1                  0.007   G protein-coupled receptor 1 
GPR1                  0.007   G protein-coupled receptor 1 
MUC16                 0.007   mucin 16 
PYCRL                 0.007   pyrroline-5-carboxylate reductase-like 
IMP5                  0.007   intramembrane protease 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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