Guide to the Human Genome
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Name: NXPH1 Sequence: fasta or formatted (271aa) NCBI GI: 23097338
Description:

neurexophilin 1 precursor

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          7           2
 C cysteine            3.0          8           1
 D aspartate           6.6         18           1
 E glutamate           3.7         10           1
 F phenylalanine       4.4         12           1
 G glycine             4.8         13           2
 H histidine           2.2          6           1
 I isoleucine          4.4         12           1
 K lysine              9.2         25           2
 L leucine             8.9         24           2
 M methionine          0.7          2           1
 N asparagine          4.8         13           1
 P proline             4.8         13           2
 Q glutamine           4.4         12           2
 R arginine            3.7         10           2
 S serine             10.0         27           2
 T threonine           8.1         22           1
 V valine              6.3         17           1
 W tryptophan          2.2          6           1
 Y tyrosine            5.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neurexophilin 1 precursor 
NXPH2                 0.576   neurexophilin 2 
NXPH3                 0.424   neurexophilin 3 
NXPH4                 0.346   neurexophilin 4 
FAM55C                0.046   hypothetical protein LOC91775 
FAM55C                0.046   hypothetical protein LOC91775 
POLR2A                0.022   DNA-directed RNA polymerase II A 
SHQ1                  0.020   SHQ1 homolog 
FAM55D                0.015   hypothetical protein LOC54827 isoform 1 
FAM55B                0.011   hypothetical protein LOC120406 
KIAA1797              0.009   hypothetical protein LOC54914 
FAM55A                0.007   hypothetical protein LOC120400 
PRG4                  0.006   proteoglycan 4 isoform B 
PRG4                  0.006   proteoglycan 4 isoform A 
MMD2                  0.006   monocyte to macrophage differentiation-associated 2...
TTRAP                 0.006   TRAF and TNF receptor-associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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