Search of human proteins with 22748737

Search of human proteins with 22748737

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22748737 zymogen granule protein 16 homolog [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22748737 zymogen granule protein 16 homolog [Homo sapiens]         343   5e-95
gi|94536866 zymogen granule protein 16 homolog B [Homo sapiens]        79   2e-15
gi|18860835 optic atrophy 1 isoform 4 [Homo sapiens]                   29   2.1  
gi|55956899 keratin 9 [Homo sapiens]                                   28   3.7  
gi|67782356 corneodesmosin precursor [Homo sapiens]                    28   4.8  
gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]            27   6.2  
gi|239751345 PREDICTED: hypothetical protein XP_002347810 [Homo ...    27   6.2  
gi|239745844 PREDICTED: hypothetical protein XP_002343563 [Homo ...    27   6.2  
gi|4503483 eukaryotic translation elongation factor 2 [Homo sapi...    27   8.1  

>gi|22748737 zymogen granule protein 16 homolog [Homo sapiens]
          Length = 167

 Score =  343 bits (879), Expect = 5e-95
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MLTVALLALLCASASGNAIQARSSSYSGEYGSGGGKRFSHSGNQLDGPITALRVRVNTYY 60
           MLTVALLALLCASASGNAIQARSSSYSGEYGSGGGKRFSHSGNQLDGPITALRVRVNTYY
Sbjct: 1   MLTVALLALLCASASGNAIQARSSSYSGEYGSGGGKRFSHSGNQLDGPITALRVRVNTYY 60

Query: 61  IVGLQVRYGKVWSDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDKGRYLSF 120
           IVGLQVRYGKVWSDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDKGRYLSF
Sbjct: 61  IVGLQVRYGKVWSDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDKGRYLSF 120

Query: 121 GKDSGTSFNAVPLHPNTVLRFISGRSGSLIDAIGLHWDVYPTSCSRC 167
           GKDSGTSFNAVPLHPNTVLRFISGRSGSLIDAIGLHWDVYPTSCSRC
Sbjct: 121 GKDSGTSFNAVPLHPNTVLRFISGRSGSLIDAIGLHWDVYPTSCSRC 167


>gi|94536866 zymogen granule protein 16 homolog B [Homo sapiens]
          Length = 208

 Score = 79.0 bits (193), Expect = 2e-15
 Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 3/133 (2%)

Query: 30  YGSGGGKRFSHSGNQLDGPITALRVRVNTYYIVGLQVRYGKVWSDYVGGRNGDLEEIFLH 89
           YG GGGK FS +    D  IT LRV V    +  +QV+ G  W   +G   G+ +E+ L 
Sbjct: 56  YGPGGGKYFSTT-EDYDHEITGLRVSVGLLLVKSVQVKLGDSWDVKLGALGGNTQEVTLQ 114

Query: 90  PGESVIQVSGKYKWYLKKLVFVTDKGRYLSFGKDSGTSFNAVPLHPNTVLRFISGRSGSL 149
           PGE + +V   ++ +L+ +V  T K RY  FGK  G   +A P     VL  I G+   L
Sbjct: 115 PGEYITKVFVAFQAFLRGMVMYTSKDRYFYFGKLDGQISSAYPSQEGQVLVGIYGQYQLL 174

Query: 150 -IDAIGLHWDVYP 161
            I +IG  W+ YP
Sbjct: 175 GIKSIGFEWN-YP 186


>gi|18860835 optic atrophy 1 isoform 4 [Homo sapiens]
          Length = 961

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 100 KYKWYLKKLVFVTDKGRYLSFGKDSGTSFNAVPLHPNTVLRFISGRSGSLI 150
           +YKW +  +V+  D+  Y+ FG    T+F A      +   F  G  G LI
Sbjct: 131 EYKWIVPDIVWEIDE--YIDFGSPEETAFRATDRGSESDKHFRKGLLGELI 179


>gi|55956899 keratin 9 [Homo sapiens]
          Length = 623

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 15 SGNAIQARSSSYSGEYGSGGGKRFSHS 41
          SG +I++  S +S   G GGG RFS S
Sbjct: 24 SGGSIRSSYSRFSSSGGGGGGGRFSSS 50


>gi|67782356 corneodesmosin precursor [Homo sapiens]
          Length = 529

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 14  ASGNAIQARSSSYSGEYGSGGGKRFSHSGN 43
           ASG++    SSS+SG  GS  G   SHS +
Sbjct: 128 ASGSSQLGSSSSHSGSSGSHSGSSSSHSSS 157


>gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 11 CASASGNAIQARSSSYSGEYGSGGGKRFSHSGNQ 44
          C+ +  +A        +G +G+GGG + SH G Q
Sbjct: 63 CSPSPSSASYVPEDLCAGAWGAGGGDKHSHFGKQ 96


>gi|239751345 PREDICTED: hypothetical protein XP_002347810 [Homo
          sapiens]
          Length = 329

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 11 CASASGNAIQARSSSYSGEYGSGGGKRFSHSGNQ 44
          C+ +  +A        +G +G+GGG + SH G Q
Sbjct: 63 CSPSPSSASYVPEDLCAGAWGAGGGDKHSHFGKQ 96


>gi|239745844 PREDICTED: hypothetical protein XP_002343563 [Homo
          sapiens]
          Length = 329

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 11 CASASGNAIQARSSSYSGEYGSGGGKRFSHSGNQ 44
          C+ +  +A        +G +G+GGG + SH G Q
Sbjct: 63 CSPSPSSASYVPEDLCAGAWGAGGGDKHSHFGKQ 96


>gi|4503483 eukaryotic translation elongation factor 2 [Homo
           sapiens]
          Length = 858

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 99  GKYKWYLKKLVFVTDKGRYLSFGK 122
           G    Y+ K+V  +DKGR+ +FG+
Sbjct: 392 GPLMMYISKMVPTSDKGRFYAFGR 415


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,480,283
Number of Sequences: 37866
Number of extensions: 268869
Number of successful extensions: 689
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 675
Number of HSP's gapped (non-prelim): 14
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.