Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ADAD1 Sequence: fasta or formatted (565aa) NCBI GI: 226529650
Description:

adenosine deaminase domain containing 1 (testis-specific) isoform 2

Referenced in:

RNA Editing and Other RNA Modifications
Testes and Sperm

Other entries for this name:
alt prot [576aa] adenosine deaminase domain containing 1 (testis-specific) isoform 1
alt prot [558aa] adenosine deaminase domain containing 1 (testis-specific) isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         40           2
 C cysteine            1.8         10           1
 D aspartate           2.7         15           2
 E glutamate           6.0         34           2
 F phenylalanine       3.2         18           1
 G glycine             5.3         30           1
 H histidine           2.3         13           1
 I isoleucine          5.8         33           2
 K lysine              7.6         43           2
 L leucine            10.4         59           2
 M methionine          3.0         17           2
 N asparagine          4.8         27           2
 P proline             5.7         32           3
 Q glutamine           5.3         30           2
 R arginine            3.4         19           2
 S serine             10.6         60           3
 T threonine           4.2         24           2
 V valine              6.0         34           2
 W tryptophan          0.9          5           1
 Y tyrosine            3.9         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenosine deaminase domain containing 1 (testis-spe... 
ADAD1                 0.993   adenosine deaminase domain containing 1 (testis-spec...
ADAD1                 0.958   adenosine deaminase domain containing 1 (testis-spe...
ADAD2                 0.131   adenosine deaminase domain containing 2 isoform 2 [...
ADAD2                 0.129   adenosine deaminase domain containing 2 isoform 1 [...
ADARB1                0.109   RNA-specific adenosine deaminase B1 isoform 1 
ADARB2                0.107   adenosine deaminase, RNA-specific, B2 
ADARB1                0.097   RNA-specific adenosine deaminase B1 isoform 2 
ADARB1                0.097   RNA-specific adenosine deaminase B1 isoform 7 [Homo...
ADAR                  0.094   adenosine deaminase, RNA-specific isoform b 
ADAR                  0.092   adenosine deaminase, RNA-specific isoform d 
ADAR                  0.092   adenosine deaminase, RNA-specific isoform a 
ADAR                  0.088   adenosine deaminase, RNA-specific isoform c 
ADARB1                0.086   RNA-specific adenosine deaminase B1 isoform 3 
ADAT1                 0.027   adenosine deaminase, tRNA-specific 1 
EIF2AK2               0.015   eukaryotic translation initiation factor 2-alpha ki...
EIF2AK2               0.015   eukaryotic translation initiation factor 2-alpha ki...
EIF2AK2               0.015   eukaryotic translation initiation factor 2-alpha kina...
STAU2                 0.014   staufen homolog 2 
PDZRN3                0.010   PDZ domain containing ring finger 3 
STAU1                 0.009   staufen isoform a 
STAU1                 0.009   staufen isoform b 
STAU1                 0.009   staufen isoform a 
STAU1                 0.009   staufen isoform a 
STAU1                 0.007   staufen isoform c 
ILF3                  0.006   interleukin enhancer binding factor 3 isoform c [Hom...
ILF3                  0.006   interleukin enhancer binding factor 3 isoform b [Hom...
ILF3                  0.006   interleukin enhancer binding factor 3 isoform a [Hom...
USP38                 0.006   ubiquitin specific peptidase 38 
TERF1                 0.006   telomeric repeat binding factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press