CCDC42 15401

Name: CCDC42	Sequence: fasta or formatted (316aa)		NCBI GI: 226494053
Description: coiled-coil domain containing 42 isoform 1		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [242aa] coiled-coil domain containing 42 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 21 2 C cysteine 0.3 1 1 D aspartate 3.5 11 2 E glutamate 12.7 40 3 F phenylalanine 2.8 9 1 G glycine 1.9 6 1 H histidine 2.8 9 1 I isoleucine 6.0 19 1 K lysine 10.8 34 3 L leucine 10.8 34 3 M methionine 5.1 16 1 N asparagine 3.5 11 2 P proline 0.6 2 1 Q glutamine 9.2 29 2 R arginine 7.6 24 2 S serine 4.1 13 1 T threonine 3.5 11 1 V valine 4.4 14 2 W tryptophan 1.6 5 1 Y tyrosine 2.2 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 42 isoform 1 CCDC42 0.503 coiled-coil domain containing 42 isoform 2 CCDC42B 0.256 coiled-coil domain containing 42B CCDC37 0.051 coiled-coil domain containing 37 RB1CC1 0.049 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.049 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... MYH9 0.047 myosin, heavy polypeptide 9, non-muscle MYH10 0.045 myosin, heavy polypeptide 10, non-muscle CCDC19 0.045 nasopharyngeal epithelium specific protein 1 TCHH 0.044 trichohyalin MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... C2orf77 0.037 hypothetical protein LOC129881 CCDC38 0.037 coiled-coil domain containing 38 MYO10 0.037 myosin X GRIPAP1 0.037 GRIP1 associated protein 1 isoform 1 CLIP1 0.035 restin isoform b CLIP1 0.035 restin isoform a CCDC46 0.035 coiled-coil domain containing 46 isoform a GRIPAP1 0.035 GRIP1 associated protein 1 isoform 2 CCDC30 0.034 coiled-coil domain containing 30 CUX1 0.034 cut-like homeobox 1 isoform a CUX1 0.034 cut-like homeobox 1 isoform b MYH15 0.034 myosin, heavy polypeptide 15 FBF1 0.034 Fas (TNFRSF6) binding factor 1 CEP250 0.034 centrosomal protein 2 ALS2CR12 0.034 amyotrophic lateral sclerosis 2 (juvenile) chromoso... CGN 0.034 cingulin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.