Guide to the Human Genome
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Name: TSHB Sequence: fasta or formatted (138aa) NCBI GI: 115430099
Description:

thyroid stimulating hormone, beta precursor

Referenced in:

Proteins Measured in Common Diagnostic Tests
Organs and Hormones
Pituitary
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8          8           1
 C cysteine            9.4         13           1
 D aspartate           3.6          5           1
 E glutamate           3.6          5           1
 F phenylalanine       5.1          7           1
 G glycine             5.1          7           1
 H histidine           2.2          3           1
 I isoleucine          6.5          9           1
 K lysine              5.1          7           1
 L leucine             8.0         11           1
 M methionine          4.3          6           1
 N asparagine          2.9          4           1
 P proline             5.1          7           1
 Q glutamine           2.2          3           1
 R arginine            3.6          5           2
 S serine              5.8          8           1
 T threonine           9.4         13           2
 V valine              4.3          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            8.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thyroid stimulating hormone, beta precursor 
FSHB                  0.298   follicle stimulating hormone, beta polypeptide precu...
FSHB                  0.298   follicle stimulating hormone, beta polypeptide precur...
LHB                   0.273   luteinizing hormone beta subunit precursor 
CGB                   0.258   chorionic gonadotropin beta 3 subunit precursor [Homo...
CGB5                  0.258   chorionic gonadotropin, beta polypeptide 5 precursor...
CGB2                  0.258   chorionic gonadotropin, beta polypeptide 2 
CGB1                  0.258   chorionic gonadotropin, beta polypeptide 1 
CGB7                  0.258   chorionic gonadotropin, beta polypeptide 7 precursor...
CGB8                  0.258   chorionic gonadotropin, beta polypeptide 8 precursor...
MYST3                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
OR2L2                 0.015   olfactory receptor, family 2, subfamily L, member 2 ...
KRT33A                0.007   keratin 33A 
PDGFD                 0.004   platelet derived growth factor D isoform 2 precursor...
ADAMTSL5              0.004   ADAMTS-like 5 
MAB21L1               0.004   mab-21-like protein 1 
CRIPAK                0.004   cysteine-rich PAK1 inhibitor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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