Guide to the Human Genome
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Name: ZNF200 Sequence: fasta or formatted (394aa) NCBI GI: 224282165
Description:

zinc finger protein 200 isoform 3

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [394aa] zinc finger protein 200 isoform 3
alt mRNA [394aa] zinc finger protein 200 isoform 3
alt prot [394aa] zinc finger protein 200 isoform 2
alt prot [395aa] zinc finger protein 200 isoform 1
alt prot [395aa] zinc finger protein 200 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.8          7           2
 C cysteine            3.6         14           1
 D aspartate           4.6         18           3
 E glutamate           9.4         37           2
 F phenylalanine       3.0         12           1
 G glycine             4.1         16           1
 H histidine           4.3         17           1
 I isoleucine          3.3         13           2
 K lysine              9.1         36           2
 L leucine             8.9         35           2
 M methionine          2.0          8           2
 N asparagine          5.3         21           1
 P proline             7.1         28           2
 Q glutamine           5.3         21           2
 R arginine            6.6         26           2
 S serine              8.1         32           3
 T threonine           5.3         21           1
 V valine              5.8         23           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 200 isoform 3 
ZNF200                1.000   zinc finger protein 200 isoform 3 
ZNF200                1.000   zinc finger protein 200 isoform 3 
ZNF200                0.994   zinc finger protein 200 isoform 1 
ZNF200                0.994   zinc finger protein 200 isoform 1 
ZNF200                0.985   zinc finger protein 200 isoform 2 
ZNF597                0.208   zinc finger protein 597 
ZNF567                0.199   zinc finger protein 567 
ZNF3                  0.194   zinc finger protein 3 isoform 2 
ZNF502                0.187   zinc finger protein 502 
ZNF502                0.187   zinc finger protein 502 
ZNF502                0.187   zinc finger protein 502 
ZNF502                0.187   zinc finger protein 502 
ZNF660                0.187   zinc finger protein 660 
ZNF391                0.185   zinc finger protein 391 
ZNF470                0.185   zinc finger protein 470 
ZNF382                0.184   zinc finger protein 382 
ZNF135                0.184   zinc finger protein 135 
ZNF714                0.183   zinc finger protein 714 
ZNF730                0.183   PREDICTED: zinc finger protein 730 
ZNF180                0.183   zinc finger protein 180 
ZNF730                0.182   PREDICTED: zinc finger protein 730 
ZNF730                0.182   PREDICTED: zinc finger protein 730 
ZNF436                0.182   zinc finger protein 436 
ZNF436                0.182   zinc finger protein 436 
ZNF329                0.182   zinc finger protein 329 
ZNF286B               0.182   zinc finger protein 286B 
ZSCAN2                0.182   zinc finger protein 29 isoform 1 
ZKSCAN1               0.182   zinc finger protein 36 
LOC344065             0.180   PREDICTED: similar to zinc finger protein 570 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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