BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|223633967 hypothetical protein LOC400696 [Homo sapiens] (151 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|223633967 hypothetical protein LOC400696 [Homo sapiens] 325 1e-89 gi|9910348 lectin, galactoside-binding, soluble, 14 isoform 1 [H... 140 3e-34 gi|45439325 lectin, galactoside-binding, soluble, 14 isoform 2 [... 134 2e-32 gi|7019497 galectin-13 [Homo sapiens] 130 4e-31 gi|20357559 Charcot-Leyden crystal protein [Homo sapiens] 127 3e-30 gi|29741322 PREDICTED: similar to lectin, galactoside-binding, s... 120 3e-28 gi|169213906 PREDICTED: similar to lectin, galactoside-binding, ... 120 4e-28 gi|89057453 PREDICTED: similar to lectin, galactoside-binding, s... 120 4e-28 gi|169213288 PREDICTED: similar to lectin, galactoside-binding, ... 118 2e-27 gi|169213908 PREDICTED: similar to lectin, galactoside-binding, ... 117 3e-27 gi|169214331 PREDICTED: similar to lectin, galactoside-binding, ... 117 3e-27 gi|102469694 galectin-9 isoform short [Homo sapiens] 54 7e-08 gi|6806890 galectin-9 isoform long [Homo sapiens] 54 7e-08 gi|111494239 galectin 9 like [Homo sapiens] 52 1e-07 gi|111494237 galectin-9 like [Homo sapiens] 52 2e-07 gi|42544193 galectin-8 isoform a [Homo sapiens] 49 1e-06 gi|42544191 galectin-8 isoform b [Homo sapiens] 49 1e-06 gi|42544187 galectin-8 isoform b [Homo sapiens] 49 1e-06 gi|42544185 galectin-8 isoform a [Homo sapiens] 49 1e-06 gi|5453712 galectin-4 [Homo sapiens] 49 2e-06 gi|115430223 galectin 3 [Homo sapiens] 39 0.002 gi|4504985 galectin-7 [Homo sapiens] 37 0.008 gi|109948279 galectin-7B [Homo sapiens] 37 0.008 gi|4504981 galectin-1 [Homo sapiens] 31 0.35 gi|8923769 histone deacetylase 8 [Homo sapiens] 29 1.3 gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo s... 29 1.3 gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens] 28 3.0 gi|149274655 synapse defective 1, Rho GTPase, homolog 2 [Homo sa... 28 3.9 gi|54112121 splicing factor 3b, subunit 3 [Homo sapiens] 27 6.6 gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 27 6.6 >gi|223633967 hypothetical protein LOC400696 [Homo sapiens] Length = 151 Score = 325 bits (832), Expect = 1e-89 Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH Sbjct: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQPFRIISYVLQHLFCSSSLK 120 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQPFRIISYVLQHLFCSSSLK Sbjct: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQPFRIISYVLQHLFCSSSLK 120 Query: 121 TFEFPSLPPPLHLWATPRRNWAISSHSEWEL 151 TFEFPSLPPPLHLWATPRRNWAISSHSEWEL Sbjct: 121 TFEFPSLPPPLHLWATPRRNWAISSHSEWEL 151 >gi|9910348 lectin, galactoside-binding, soluble, 14 isoform 1 [Homo sapiens] Length = 139 Score = 140 bits (354), Expect = 3e-34 Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 6/127 (4%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MSSL VP+T PVSL GSCVIITGTPI+ FV DPQL+V+F+T M EDSDIAF FR++FGH Sbjct: 1 MSSLPVPYTLPVSLPVGSCVIITGTPILTFVKDPQLEVNFYTGMDEDSDIAFQFRLHFGH 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQPF----RIISYVLQHLFCS 116 +MNS V G W+YE C+ +PF+DGKPF LCI V EY+ RI Y H F Sbjct: 61 PAIMNSCVFGIWRYEEKCYYLPFEDGKPFELCIYVRHKEYKVMVNGQRI--YNFAHRFPP 118 Query: 117 SSLKTFE 123 +S+K + Sbjct: 119 ASVKMLQ 125 >gi|45439325 lectin, galactoside-binding, soluble, 14 isoform 2 [Homo sapiens] Length = 168 Score = 134 bits (338), Expect = 2e-32 Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 6/122 (4%) Query: 6 VPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGHWVVMN 65 VP+T PVSL GSCVIITGTPI+ FV DPQL+V+F+T M EDSDIAF FR++FGH +MN Sbjct: 35 VPYTLPVSLPVGSCVIITGTPILTFVKDPQLEVNFYTGMDEDSDIAFQFRLHFGHPAIMN 94 Query: 66 SRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQPF----RIISYVLQHLFCSSSLKT 121 S V G W+YE C+ +PF+DGKPF LCI V EY+ RI Y H F +S+K Sbjct: 95 SCVFGIWRYEEKCYYLPFEDGKPFELCIYVRHKEYKVMVNGQRI--YNFAHRFPPASVKM 152 Query: 122 FE 123 + Sbjct: 153 LQ 154 >gi|7019497 galectin-13 [Homo sapiens] Length = 139 Score = 130 bits (327), Expect = 4e-31 Identities = 65/101 (64%), Positives = 75/101 (74%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MSSL VP+ PVSLS GSCVII GTPI F+ DPQLQVDF+T+M EDSDIAF FRV+FG+ Sbjct: 1 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VVMN R G W E T +PF+DGK F LCI V +EY+ Sbjct: 61 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYE 101 >gi|20357559 Charcot-Leyden crystal protein [Homo sapiens] Length = 142 Score = 127 bits (320), Expect = 3e-30 Identities = 64/101 (63%), Positives = 74/101 (73%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MS L VP+T SLSTGS V I G P+ F+ +P LQVDFHTEMKE+SDI FHF+V FG Sbjct: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VVMNSR GAW+ +V NMPFQDG+ F L ISVL D+YQ Sbjct: 61 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQ 101 >gi|29741322 PREDICTED: similar to lectin, galactoside-binding, soluble, 14 isoform 1 [Homo sapiens] Length = 142 Score = 120 bits (302), Expect = 3e-28 Identities = 61/101 (60%), Positives = 72/101 (71%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MS L VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G Sbjct: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VVMNSR G W E H +PF+DGKPF+L I V +EY+ Sbjct: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYE 101 >gi|169213906 PREDICTED: similar to lectin, galactoside-binding, soluble, 14 isoform 2 [Homo sapiens] Length = 142 Score = 120 bits (301), Expect = 4e-28 Identities = 61/101 (60%), Positives = 72/101 (71%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MS L VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G Sbjct: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VVMNSR G W E H +PF+DGKPF+L I V +EY+ Sbjct: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYE 101 >gi|89057453 PREDICTED: similar to lectin, galactoside-binding, soluble, 14 isoform 1 [Homo sapiens] Length = 142 Score = 120 bits (301), Expect = 4e-28 Identities = 61/101 (60%), Positives = 72/101 (71%) Query: 1 MSSLKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGH 60 MS L VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G Sbjct: 1 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR 60 Query: 61 WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VVMNSR G W E H +PF+DGKPF+L I V +EY+ Sbjct: 61 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYE 101 >gi|169213288 PREDICTED: similar to lectin, galactoside-binding, soluble, 14 [Homo sapiens] Length = 172 Score = 118 bits (295), Expect = 2e-27 Identities = 58/98 (59%), Positives = 71/98 (72%) Query: 4 LKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGHWVV 63 ++VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G VV Sbjct: 34 VRVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRRVV 93 Query: 64 MNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 MNSR G W E H +PF+DGKPF+L I V +EY+ Sbjct: 94 MNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCLNEYE 131 >gi|169213908 PREDICTED: similar to lectin, galactoside-binding, soluble, 14 isoform 1 [Homo sapiens] Length = 172 Score = 117 bits (294), Expect = 3e-27 Identities = 58/98 (59%), Positives = 71/98 (72%) Query: 4 LKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGHWVV 63 ++VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G VV Sbjct: 34 VRVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRRVV 93 Query: 64 MNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 MNSR G W E H +PF+DGKPF+L I V +EY+ Sbjct: 94 MNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYE 131 >gi|169214331 PREDICTED: similar to lectin, galactoside-binding, soluble, 14 [Homo sapiens] Length = 172 Score = 117 bits (294), Expect = 3e-27 Identities = 58/98 (59%), Positives = 71/98 (72%) Query: 4 LKVPHTRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGHWVV 63 ++VP+ PVSLS GSCVII GT I + +PQLQVDF+TEM EDS+IAFH RV+ G VV Sbjct: 34 VRVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRRVV 93 Query: 64 MNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 MNSR G W E H +PF+DGKPF+L I V +EY+ Sbjct: 94 MNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYE 131 >gi|102469694 galectin-9 isoform short [Homo sapiens] Length = 323 Score = 53.5 bits (127), Expect = 7e-08 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 14 LSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYF--GHWVVMNSRVNGA 71 L G + + GT + + V+F T +DIAFHF F G +VV N+R NG+ Sbjct: 25 LQDGLQITVNGTVLSS--SGTRFAVNFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQNGS 81 Query: 72 WQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 W E +MPFQ G PF+LC V + +++ Sbjct: 82 WGPEERKTHMPFQKGMPFDLCFLVQSSDFK 111 >gi|6806890 galectin-9 isoform long [Homo sapiens] Length = 355 Score = 53.5 bits (127), Expect = 7e-08 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 14 LSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYF--GHWVVMNSRVNGA 71 L G + + GT + + V+F T +DIAFHF F G +VV N+R NG+ Sbjct: 25 LQDGLQITVNGTVLSS--SGTRFAVNFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQNGS 81 Query: 72 WQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 W E +MPFQ G PF+LC V + +++ Sbjct: 82 WGPEERKTHMPFQKGMPFDLCFLVQSSDFK 111 >gi|111494239 galectin 9 like [Homo sapiens] Length = 356 Score = 52.4 bits (124), Expect = 1e-07 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Query: 38 VDFHTEMKEDSDIAFHFRVYF--GHWVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISV 95 VDF T +DIAFHF F G +VV N+R G W E +MPFQ G PF+LC V Sbjct: 47 VDFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQKGTWGPEERKMHMPFQKGMPFDLCFLV 105 Query: 96 LADEYQ 101 + +++ Sbjct: 106 QSSDFK 111 >gi|111494237 galectin-9 like [Homo sapiens] Length = 355 Score = 52.0 bits (123), Expect = 2e-07 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Query: 38 VDFHTEMKEDSDIAFHFRVYF--GHWVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISV 95 VDF T +DIAFHF F G +VV N+R G W E +MPFQ G PF+LC V Sbjct: 47 VDFQTGFS-GNDIAFHFNPRFEDGGYVVCNTRQKGRWGPEERKMHMPFQKGMPFDLCFLV 105 Query: 96 LADEYQ 101 + +++ Sbjct: 106 QSSDFK 111 >gi|42544193 galectin-8 isoform a [Homo sapiens] Length = 359 Score = 49.3 bits (116), Expect = 1e-06 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 9 TRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFH--TEMKEDSDIAFHFRVYF--GHWVVM 64 T P L G+ ++I G +P D + QVD + MK +D+AFHF F +V Sbjct: 22 TIPDQLDPGTLIVIRGH--VPSDAD-RFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVC 78 Query: 65 NSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 N+ +N W E ++ PF+ K F + I VL D++Q Sbjct: 79 NTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQ 115 >gi|42544191 galectin-8 isoform b [Homo sapiens] Length = 317 Score = 49.3 bits (116), Expect = 1e-06 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 9 TRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFH--TEMKEDSDIAFHFRVYF--GHWVVM 64 T P L G+ ++I G +P D + QVD + MK +D+AFHF F +V Sbjct: 22 TIPDQLDPGTLIVIRGH--VPSDAD-RFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVC 78 Query: 65 NSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 N+ +N W E ++ PF+ K F + I VL D++Q Sbjct: 79 NTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQ 115 >gi|42544187 galectin-8 isoform b [Homo sapiens] Length = 317 Score = 49.3 bits (116), Expect = 1e-06 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 9 TRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFH--TEMKEDSDIAFHFRVYF--GHWVVM 64 T P L G+ ++I G +P D + QVD + MK +D+AFHF F +V Sbjct: 22 TIPDQLDPGTLIVIRGH--VPSDAD-RFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVC 78 Query: 65 NSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 N+ +N W E ++ PF+ K F + I VL D++Q Sbjct: 79 NTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQ 115 >gi|42544185 galectin-8 isoform a [Homo sapiens] Length = 359 Score = 49.3 bits (116), Expect = 1e-06 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 9 TRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFH--TEMKEDSDIAFHFRVYF--GHWVVM 64 T P L G+ ++I G +P D + QVD + MK +D+AFHF F +V Sbjct: 22 TIPDQLDPGTLIVIRGH--VPSDAD-RFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVC 78 Query: 65 NSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 N+ +N W E ++ PF+ K F + I VL D++Q Sbjct: 79 NTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQ 115 >gi|5453712 galectin-4 [Homo sapiens] Length = 323 Score = 48.5 bits (114), Expect = 2e-06 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 7/100 (7%) Query: 6 VPHTRPV--SLSTGSCVIITGTPIIPFVMDPQLQVDFHTEMKEDSDIAFHFRVYFGHW-- 61 +P+ +P+ L+ G V I G + + V+F SD+AFHF F W Sbjct: 17 LPYYQPIPGGLNVGMSVYIQG---VASEHMKRFFVNFVVGQDPGSDVAFHFNPRFDGWDK 73 Query: 62 VVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VV N+ G W E +MPF+ G F L VLA+ Y+ Sbjct: 74 VVFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYK 113 >gi|115430223 galectin 3 [Homo sapiens] Length = 250 Score = 38.5 bits (88), Expect = 0.002 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 4/74 (5%) Query: 43 EMKEDSDIAFHFRVYFGH----WVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLAD 98 + + +D+AFHF F +V N++++ W E PF+ GKPF + + V D Sbjct: 148 DFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPD 207 Query: 99 EYQPFRIISYVLQH 112 ++ +++LQ+ Sbjct: 208 HFKVAVNDAHLLQY 221 >gi|4504985 galectin-7 [Homo sapiens] Length = 136 Score = 36.6 bits (83), Expect = 0.008 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 14/103 (13%) Query: 6 VPH--TRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEM----KEDSDIAFHFRVYFG 59 VPH + P + G+ + I G + P FH + ++ SD A HF Sbjct: 4 VPHKSSLPEGIRPGTVLRIRG-------LVPPNASRFHVNLLCGEEQGSDAALHFNPRLD 56 Query: 60 -HWVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VV NS+ G+W E +PFQ G+PF + I D ++ Sbjct: 57 TSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFK 99 >gi|109948279 galectin-7B [Homo sapiens] Length = 136 Score = 36.6 bits (83), Expect = 0.008 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 14/103 (13%) Query: 6 VPH--TRPVSLSTGSCVIITGTPIIPFVMDPQLQVDFHTEM----KEDSDIAFHFRVYFG 59 VPH + P + G+ + I G + P FH + ++ SD A HF Sbjct: 4 VPHKSSLPEGIRPGTVLRIRG-------LVPPNASRFHVNLLCGEEQGSDAALHFNPRLD 56 Query: 60 -HWVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQ 101 VV NS+ G+W E +PFQ G+PF + I D ++ Sbjct: 57 TSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFK 99 >gi|4504981 galectin-1 [Homo sapiens] Length = 135 Score = 31.2 bits (69), Expect = 0.35 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 45 KEDSDIAFHFRVYFG-----HWVVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCIS 94 K+ +++ HF F + +V NS+ GAW E PFQ G +CI+ Sbjct: 37 KDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCIT 91 >gi|8923769 histone deacetylase 8 [Homo sapiens] Length = 377 Score = 29.3 bits (64), Expect = 1.3 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Query: 80 NMPFQDG----KPFNLCISVLADEYQPFRIISYVLQ 111 N+P QDG K + +C SVL + YQ F + VLQ Sbjct: 228 NVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQ 263 >gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo sapiens] Length = 375 Score = 29.3 bits (64), Expect = 1.3 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 94 SVLADEYQPFRIISYVLQHLFCSSSLKTFEFP-SLPPPLHLWATPRRNWAISS 145 S+ ++ FRI+S+ L L C + P SLPPPL L ++ SS Sbjct: 15 SIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNITESYPSSS 67 >gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens] Length = 4753 Score = 28.1 bits (61), Expect = 3.0 Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 60 HWVVMNSRVNGAWQYEVTC 78 HW++ + NGAW +TC Sbjct: 2082 HWIICDGASNGAWLDSITC 2100 >gi|149274655 synapse defective 1, Rho GTPase, homolog 2 [Homo sapiens] Length = 1194 Score = 27.7 bits (60), Expect = 3.9 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Query: 115 CSSSLKTFEFPSLPPPLHLWATPRRNW-AISSHSEWE 150 CS SL++ + PPP W P +W +H +W+ Sbjct: 83 CSRSLESLRVGAKPPPFQRW--PSDSWIRCGAHRDWD 117 >gi|54112121 splicing factor 3b, subunit 3 [Homo sapiens] Length = 1217 Score = 26.9 bits (58), Expect = 6.6 Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 20 VIITGTPIIPFVMDPQLQVDFHTEMKEDS 48 + +TG ++ F MDP Q++ +TE KE S Sbjct: 556 IALTGGELVYFEMDPSGQLNEYTERKEMS 584 >gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] Length = 4363 Score = 26.9 bits (58), Expect = 6.6 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 60 HW--VVMNSRVNGAWQYEVTCHNMPFQDGKPFNLCISVLADEYQPFRIISYVLQHLFCSS 117 HW VV + ++ + + CH+M + + F C+++ + Y Y+ ++F S Sbjct: 3090 HWTNVVKTAEISSSKR---ECHSMDTEKSRFFRFCVAIKKENYP-----DYMPSNIFSDS 3141 Query: 118 SLKTFEFP 125 + + F P Sbjct: 3142 AKQIFRQP 3149 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.325 0.137 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,830,457 Number of Sequences: 37866 Number of extensions: 280741 Number of successful extensions: 723 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 697 Number of HSP's gapped (non-prelim): 34 length of query: 151 length of database: 18,247,518 effective HSP length: 93 effective length of query: 58 effective length of database: 14,725,980 effective search space: 854106840 effective search space used: 854106840 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.