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Search of human proteins with 22165427
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22165427 small inducible cytokine A24 precursor [Homo
sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 246 2e-66
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 67 2e-12
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 67 2e-12
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 67 2e-12
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 67 2e-12
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 67 2e-12
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 67 2e-12
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 65 1e-11
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 63 6e-11
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 63 6e-11
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 62 1e-10
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 60 4e-10
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 60 5e-10
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 60 5e-10
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 59 6e-10
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 55 2e-08
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 52 1e-07
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 51 2e-07
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 51 2e-07
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 50 3e-07
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 50 4e-07
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 48 2e-06
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 48 2e-06
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 47 3e-06
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 46 7e-06
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 45 1e-05
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 44 2e-05
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 44 3e-05
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 44 3e-05
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 39 0.001
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 246 bits (629), Expect = 2e-66
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK 60
MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK
Sbjct: 1 MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK 60
Query: 61 AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC 119
AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC
Sbjct: 61 AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC 119
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 67.4 bits (163), Expect = 2e-12
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
P+ CC + S++IP+N + Y + S C K GVIF TK+ +Q C DP +EWVQ+Y+ +L
Sbjct: 30 PTACCFSYTSRQIPQNFIADY-FETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 88
Query: 90 D 90
+
Sbjct: 89 E 89
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 67.4 bits (163), Expect = 2e-12
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 5 MTIVTSLLFLGVCAHHIIPTG-----SVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCL 59
M + +LL L + A P G SV IP CC ++++IP R+ SY + C
Sbjct: 1 MKVSAALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCP 60
Query: 60 KAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
K VIF TK+G++ C DPK+ WV+ MK+LD
Sbjct: 61 KEAVIFKTKRGKEVCADPKERWVRDSMKHLD 91
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 67.4 bits (163), Expect = 2e-12
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
P+ CC + S++IP+N + Y + S C K VIF TK+G+Q C DP +EWVQ+Y+ +L
Sbjct: 31 PTACCFSYTSRQIPQNFIADY-FETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89
Query: 90 D 90
+
Sbjct: 90 E 90
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 67.4 bits (163), Expect = 2e-12
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 29 IPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKN 88
+PS CC F SK+I R+ SY +++ S C + VIF TK G++ C DPK++WVQ YMK+
Sbjct: 30 VPSTCCFTFSSKKISLQRLKSYVITT-SRCPQKAVIFRTKLGKEICADPKEKWVQNYMKH 88
Query: 89 LDAK 92
L K
Sbjct: 89 LGRK 92
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 67.4 bits (163), Expect = 2e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 33 CCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAK 92
CC F++K+IP+ R+ SY+ ++ S C + VIF TK ++ C DP Q+WVQ +MK+LD K
Sbjct: 34 CCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHLDKK 93
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 67.4 bits (163), Expect = 2e-12
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
P+ CC + S++IP+N + Y + S C K VIF TK+G+Q C DP +EWVQ+Y+ +L
Sbjct: 31 PTACCFSYTSRQIPQNFIADY-FETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89
Query: 90 D 90
+
Sbjct: 90 E 90
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 65.1 bits (157), Expect = 1e-11
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 5 MTIVTSLLFLGVCAHHIIP---TGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKA 61
M + +LL+L + A P G +P+ CC +++IP R+ SY+ + C +
Sbjct: 1 MKVSAALLWLLLIAAAFSPQGLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQK 60
Query: 62 GVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASP 98
VIF TK + C DPK++WVQ MK LD K P
Sbjct: 61 AVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP 97
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 62.8 bits (151), Expect = 6e-11
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 4 LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
L+ +V + L + A P GS P+ CC + ++++P N VV Y +S S C + V
Sbjct: 10 LLVLVAAFCSLALSA----PMGSDP-PTACCFSYTARKLPRNFVVDYYETS-SLCSQPAV 63
Query: 64 IFTTKKGQQFCGDPKQEWVQRYMKNLD 90
+F TK+G+Q C DP + WVQ Y+ +L+
Sbjct: 64 VFQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 62.8 bits (151), Expect = 6e-11
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 4 LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
L+ +V + L + A P GS P+ CC + ++++P N VV Y +S S C + V
Sbjct: 10 LLVLVAAFCSLALSA----PMGSDP-PTACCFSYTARKLPRNFVVDYYETS-SLCSQPAV 63
Query: 64 IFTTKKGQQFCGDPKQEWVQRYMKNLD 90
+F TK+G+Q C DP + WVQ Y+ +L+
Sbjct: 64 VFQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 62.0 bits (149), Expect = 1e-10
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 5 MTIVTSLLFLGVCAHHIIPTG-----SVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCL 59
M + +LL L + A IP G ++ P CC F +++I R+ SY+ + S C
Sbjct: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
Query: 60 KAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
K VIF T ++ C DPKQ+WVQ M +LD
Sbjct: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 60.1 bits (144), Expect = 4e-10
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 4 LMTIVTSLLFL--GVCAHHI-IPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK 60
L V SLL L C+ + P GS P+ CC + ++++P N VV Y +S S C +
Sbjct: 3 LCVTVLSLLMLVAAFCSPALSAPMGSDP-PTACCFSYTARKLPRNFVVDYYETS-SLCSQ 60
Query: 61 AGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
V+F TK+ +Q C DP + WVQ Y+ +L+
Sbjct: 61 PAVVFQTKRSKQVCADPSESWVQEYVYDLE 90
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 59.7 bits (143), Expect = 5e-10
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
PS CC + + +IP R++ Y + S C K G++F TK+G C +P +WVQ Y+K++
Sbjct: 48 PSECCFTYTTYKIPRQRIMDYY-ETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 106
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 59.7 bits (143), Expect = 5e-10
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
PS CC + + +IP R++ Y + S C K G++F TK+G C +P +WVQ Y+K++
Sbjct: 32 PSECCFTYTTYKIPRQRIMDYY-ETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 59.3 bits (142), Expect = 6e-10
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 33 CCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
CC+ + S +IP+ +V Y +S C K GVI TK+G+Q C DP ++WVQ+Y+ +L
Sbjct: 30 CCLVYTSWQIPQKFIVDYSETSPQ-CPKPGVILLTKRGRQICADPNKKWVQKYISDL 85
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 54.7 bits (130), Expect = 2e-08
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 5 MTIVTSLLFLGVCAHHI-IPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
+++ +++L + + H+ T I CC + K +P V SY+ +S S C + V
Sbjct: 4 LSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNS-CSQRAV 62
Query: 64 IFTTKKGQQFCGDPKQEWVQRYMKNL 89
IFTTK+G++ C P+++WVQ+Y+ L
Sbjct: 63 IFTTKRGKKVCTHPRKKWVQKYISLL 88
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 52.0 bits (123), Expect = 1e-07
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 11 LLFLGVC---AHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTT 67
L LG+C A+ + GS V C+ ++R+P +R+ +Y ++ S L+A VIF T
Sbjct: 6 LALLGICSLTAYIVEGVGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGS--LRA-VIFIT 62
Query: 68 KKGQQFCGDPKQEWVQRYMKNLDAK 92
K+G + C DP+ WV+ ++++D K
Sbjct: 63 KRGLKVCADPQATWVRDVVRSMDRK 87
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 51.2 bits (121), Expect = 2e-07
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 31 SPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
+PCC ++++ +P + Y +S C V+F T+K +Q C +P+++WV+ Y+ +L+
Sbjct: 31 TPCCFAYIARPLPRAHIKEYFYTS-GKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 51.2 bits (121), Expect = 2e-07
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 11 LLFLGVC---AHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTT 67
L LG+C A+ + GS V C+ ++R+P +R+ +Y ++ S L+A VIF T
Sbjct: 6 LALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGS--LRA-VIFIT 62
Query: 68 KKGQQFCGDPKQEWVQRYMKNLDAK 92
K+G + C DP+ WV+ ++++D K
Sbjct: 63 KRGLKVCADPQATWVRDVVRSMDRK 87
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 50.4 bits (119), Expect = 3e-07
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKN 88
PS CC+ + K +P VV Y+ + C +IF TK+ ++ C +P +WVQ Y+K+
Sbjct: 34 PSTCCLKYYEKVLPRRLVVGYRKALN--CHLPAIIFVTKRNREVCTNPNDDWVQEYIKD 90
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 9 TSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTK 68
T L+ + + + S + CC ++S+ IP + + SY + S C K GVIF TK
Sbjct: 29 TELMMSKLPLENPVVLNSFHFAADCCTSYISQSIPCSLMKSY-FETSSECSKPGVIFLTK 87
Query: 69 KGQQFCGDPKQEWVQRYMKNL 89
KG+Q C P VQ MK L
Sbjct: 88 KGRQVCAKPSGPGVQDCMKKL 108
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 47.8 bits (112), Expect = 2e-06
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 33 CCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQ 83
CC+ + + IP + + SY + S C K GVIF TKKG++FC +P + VQ
Sbjct: 54 CCISYTPRSIPCSLLESY-FETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 103
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 47.8 bits (112), Expect = 2e-06
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 33 CCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQ 83
CC+ + + IP + + SY + S C K GVIF TKKG++FC +P + VQ
Sbjct: 71 CCISYTPRSIPCSLLESY-FETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 47.0 bits (110), Expect = 3e-06
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 4 LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
+ T + LL G+ + V S CC F + IP ++ Y+ +S S C G+
Sbjct: 4 ITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTS-SICSNEGL 62
Query: 64 IFTTKKGQQFCGDPKQEWVQRYMKNL 89
IF K+G++ C WVQR+ K L
Sbjct: 63 IFKLKRGKEACALDTVGWVQRHRKML 88
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 45.8 bits (107), Expect = 7e-06
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 5 MTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVI 64
+ +V LL + + A P G+ + S CC +V R+P RVV + + +C + GV+
Sbjct: 8 LLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPL-RVVKHFYWTSDSCPRPGVV 66
Query: 65 FTTKKGQQFCGDPKQEWVQRYMKNL 89
T + ++ C DP+ WV+ + L
Sbjct: 67 LLTFRDKEICADPRVPWVKMILNKL 91
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 33 CCMFFVSKRIPENRVVSYQ-LSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL-- 89
CC+ K IP V ++ L + C V+FTT +G+Q C P Q WV+R ++ L
Sbjct: 29 CCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQR 88
Query: 90 -DAKQKKAS 97
AK K+ S
Sbjct: 89 TSAKMKRRS 97
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 44.3 bits (103), Expect = 2e-05
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 33 CCMFFVSKRIPENRVVSYQLSSRST-CLKAGVIFTTKKGQQ--FCGDPKQEWVQRYMKNL 89
CC+ + ++IP V SY+ S C ++F +K Q C DPK+ WVQ+ M++L
Sbjct: 31 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 90
Query: 90 DAKQKKASP 98
D P
Sbjct: 91 DKTPSPQKP 99
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 43.9 bits (102), Expect = 3e-05
Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 38 VSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
++ +IP ++ YQ ++++C K +I T++ + FC DPK++WV+ M++LD
Sbjct: 39 MTSKIPVALLIHYQ-QNQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLD 90
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 43.9 bits (102), Expect = 3e-05
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 1 MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK 60
MA L + L LG HI + CC+ + IP ++ ++ +S C +
Sbjct: 1 MAPLKMLALVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSED-CSR 59
Query: 61 AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQK 94
++F T +G+ C DP + V+ +K L + ++
Sbjct: 60 DAIVFVTVQGRAICSDPNNKRVKNAVKYLQSLER 93
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 4 LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSY--QLSSRSTCLKA 61
L+ + S+L L +C S CC+ + + + +V + QL++ + A
Sbjct: 8 LLAALMSVLLLHLCGE------SEASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINA 61
Query: 62 GVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQK 94
+IF TKK C +PKQ WV+ ++ L K K
Sbjct: 62 -IIFHTKKKLSVCANPKQTWVKYIVRLLSKKVK 93
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,600,365
Number of Sequences: 37866
Number of extensions: 177106
Number of successful extensions: 568
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 508
Number of HSP's gapped (non-prelim): 52
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.