Guide to the Human Genome
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Name: SCTR Sequence: fasta or formatted (440aa) NCBI GI: 114205383
Description:

secretin receptor precursor

Referenced in:

Stomach, Small Intestine, and Colon
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         27           2
 C cysteine            3.6         16           1
 D aspartate           3.0         13           2
 E glutamate           5.0         22           2
 F phenylalanine       5.9         26           2
 G glycine             5.5         24           1
 H histidine           3.2         14           1
 I isoleucine          5.9         26           2
 K lysine              2.5         11           2
 L leucine            14.3         63           3
 M methionine          2.5         11           1
 N asparagine          3.9         17           1
 P proline             4.1         18           2
 Q glutamine           4.5         20           2
 R arginine            5.9         26           2
 S serine              8.0         35           3
 T threonine           3.6         16           1
 V valine              7.0         31           2
 W tryptophan          2.7         12           2
 Y tyrosine            2.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   secretin receptor precursor 
VIPR1                 0.451   vasoactive intestinal peptide receptor 1 
ADCYAP1R1             0.441   adenylate cyclase activating polypeptide 1 (pituitar...
VIPR2                 0.410   vasoactive intestinal peptide receptor 2 
GHRHR                 0.356   growth hormone releasing hormone receptor isoform a ...
PTH1R                 0.334   parathyroid hormone receptor 1 precursor 
GLP1R                 0.313   glucagon-like peptide 1 receptor 
GLP2R                 0.311   glucagon-like peptide 2 receptor precursor 
PTH2R                 0.304   parathyroid hormone 2 receptor precursor 
GCGR                  0.296   glucagon receptor 
GIPR                  0.294   gastric inhibitory polypeptide receptor 
GHRHR                 0.261   growth hormone releasing hormone receptor isoform b ...
CRHR2                 0.208   corticotropin releasing hormone receptor 2 
CRHR1                 0.199   corticotropin releasing hormone receptor 1 isoform 2...
CALCRL                0.187   calcitonin receptor-like 
CALCR                 0.184   calcitonin receptor 
CRHR1                 0.182   corticotropin releasing hormone receptor 1 isoform ...
CRHR1                 0.181   corticotropin releasing hormone receptor 1 isoform ...
CRHR1                 0.166   corticotropin releasing hormone receptor 1 isoform ...
GPR133                0.076   G protein-coupled receptor 133 
LPHN1                 0.074   latrophilin 1 isoform 1 precursor 
LPHN1                 0.074   latrophilin 1 isoform 2 precursor 
EMR1                  0.071   egf-like module containing, mucin-like, hormone rece...
LPHN2                 0.067   latrophilin 2 precursor 
EMR3                  0.066   egf-like module-containing mucin-like receptor 3 [H...
EMR2                  0.064   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.064   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.064   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.064   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.064   egf-like module containing, mucin-like, hormone rece...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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