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Search of human proteins with 219842335
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219842335 glutathione S-transferase kappa 1 isoform d [Homo
sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219842335 glutathione S-transferase kappa 1 isoform d [Homo s... 372 e-103
gi|7705704 glutathione S-transferase kappa 1 isoform a [Homo sap... 351 2e-97
gi|219842333 glutathione S-transferase kappa 1 isoform c [Homo s... 319 7e-88
gi|219842317 glutathione S-transferase kappa 1 isoform b [Homo s... 313 7e-86
gi|7661892 REST corepressor 1 [Homo sapiens] 32 0.30
gi|118600961 akt substrate AS250 [Homo sapiens] 29 2.6
gi|218156307 anoctamin 6 isoform c [Homo sapiens] 27 7.5
gi|218156305 anoctamin 6 isoform c [Homo sapiens] 27 7.5
gi|218156303 anoctamin 6 isoform b [Homo sapiens] 27 7.5
gi|218156299 anoctamin 6 isoform a [Homo sapiens] 27 7.5
gi|163965362 nascent polypeptide-associated complex alpha subuni... 27 7.5
gi|163965366 nascent polypeptide-associated complex alpha subuni... 27 7.5
gi|5031931 nascent polypeptide-associated complex alpha subunit ... 27 7.5
gi|163965364 nascent polypeptide-associated complex alpha subuni... 27 7.5
gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Ho... 27 9.8
>gi|219842335 glutathione S-transferase kappa 1 isoform d [Homo
sapiens]
Length = 183
Score = 372 bits (954), Expect = e-103
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFL 60
MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFL
Sbjct: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFL 60
Query: 61 TAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPK 120
TAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPK
Sbjct: 61 TAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPK 120
Query: 121 VKNQLKETTEAACRYGAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVN 180
VKNQLKETTEAACRYGAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVN
Sbjct: 121 VKNQLKETTEAACRYGAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVN 180
Query: 181 ARL 183
ARL
Sbjct: 181 ARL 183
>gi|7705704 glutathione S-transferase kappa 1 isoform a [Homo
sapiens]
Length = 226
Score = 351 bits (900), Expect = 2e-97
Identities = 183/226 (80%), Positives = 183/226 (80%), Gaps = 43/226 (19%)
Query: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSG-------- 52
MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSG
Sbjct: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP 60
Query: 53 -----------------------------------SLSAMRFLTAVNLEHPEMLEKASRE 77
SLSAMRFLTAVNLEHPEMLEKASRE
Sbjct: 61 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE 120
Query: 78 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA 137
LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA
Sbjct: 121 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA 180
Query: 138 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL 183
FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
Sbjct: 181 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL 226
>gi|219842333 glutathione S-transferase kappa 1 isoform c [Homo
sapiens]
Length = 214
Score = 319 bits (818), Expect = 7e-88
Identities = 171/226 (75%), Positives = 171/226 (75%), Gaps = 55/226 (24%)
Query: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDS--------- 51
MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDS
Sbjct: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP 60
Query: 52 ----------------------------------GSLSAMRFLTAVNLEHPEMLEKASRE 77
GSLSAMRFLTAVNLEHPEMLEKASRE
Sbjct: 61 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE 120
Query: 78 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA 137
LWMRVWSR AAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA
Sbjct: 121 LWMRVWSR------------AAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA 168
Query: 138 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL 183
FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
Sbjct: 169 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL 214
>gi|219842317 glutathione S-transferase kappa 1 isoform b [Homo
sapiens]
Length = 282
Score = 313 bits (801), Expect = 7e-86
Identities = 181/282 (64%), Positives = 182/282 (64%), Gaps = 99/282 (35%)
Query: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSG-------- 52
MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSG
Sbjct: 1 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP 60
Query: 53 -----------------------------------SLSAMRFLTAVNLEHPEMLEKASRE 77
SLSAMRFLTAVNLEHPEMLEKASRE
Sbjct: 61 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE 120
Query: 78 L----WMRV----W---------------------------------------------- 83
L W RV W
Sbjct: 121 LWMRVWSRVSVGLWESSGRTLDDFLTFPRHVFRVMILPPPGGSTVLPVTPLSPHRLPAVF 180
Query: 84 --SRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAFGLP 141
S+NEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAFGLP
Sbjct: 181 SSSQNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAFGLP 240
Query: 142 ITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL 183
ITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
Sbjct: 241 ITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL 282
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 32.0 bits (71), Expect = 0.30
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 68 PEMLEKASRE---LWMRVWSRNEDITEP---QSILAAAEKAGMSAEQAQGLL 113
P L + S+E L M VWS N++++E + I A EK G + EQA G+L
Sbjct: 117 PAKLARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGML 168
>gi|118600961 akt substrate AS250 [Homo sapiens]
Length = 1873
Score = 28.9 bits (63), Expect = 2.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 83 WSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAA 132
W + D+TEP +A E+A+ ++ + AT + Q E AA
Sbjct: 699 WRSHPDVTEPMRFRSATTSGAPGVEKARNIVRQKATEVEECQQSENAPAA 748
>gi|218156307 anoctamin 6 isoform c [Homo sapiens]
Length = 929
Score = 27.3 bits (59), Expect = 7.5
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 23 FEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFLTAVNLEHPEMLEKASRELWMRV 82
+E+LC Y I +I L L+P+ + S + + + T V L E + K +E +
Sbjct: 130 WEVLCTYAEIMHIKLPLKPN---DLKNRSSAFGTLNWFTKV-LSVDESIIKPEQEFFTAP 185
Query: 83 WSRN 86
+ +N
Sbjct: 186 FEKN 189
>gi|218156305 anoctamin 6 isoform c [Homo sapiens]
Length = 929
Score = 27.3 bits (59), Expect = 7.5
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 23 FEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFLTAVNLEHPEMLEKASRELWMRV 82
+E+LC Y I +I L L+P+ + S + + + T V L E + K +E +
Sbjct: 130 WEVLCTYAEIMHIKLPLKPN---DLKNRSSAFGTLNWFTKV-LSVDESIIKPEQEFFTAP 185
Query: 83 WSRN 86
+ +N
Sbjct: 186 FEKN 189
>gi|218156303 anoctamin 6 isoform b [Homo sapiens]
Length = 892
Score = 27.3 bits (59), Expect = 7.5
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 23 FEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFLTAVNLEHPEMLEKASRELWMRV 82
+E+LC Y I +I L L+P+ + S + + + T V L E + K +E +
Sbjct: 112 WEVLCTYAEIMHIKLPLKPN---DLKNRSSAFGTLNWFTKV-LSVDESIIKPEQEFFTAP 167
Query: 83 WSRN 86
+ +N
Sbjct: 168 FEKN 171
>gi|218156299 anoctamin 6 isoform a [Homo sapiens]
Length = 910
Score = 27.3 bits (59), Expect = 7.5
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 23 FEILCRYQNIWNINLQLRPSLITGIMKDSGSLSAMRFLTAVNLEHPEMLEKASRELWMRV 82
+E+LC Y I +I L L+P+ + S + + + T V L E + K +E +
Sbjct: 130 WEVLCTYAEIMHIKLPLKPN---DLKNRSSAFGTLNWFTKV-LSVDESIIKPEQEFFTAP 185
Query: 83 WSRN 86
+ +N
Sbjct: 186 FEKN 189
>gi|163965362 nascent polypeptide-associated complex alpha subunit
isoform b [Homo sapiens]
Length = 215
Score = 27.3 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 87 EDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKE 127
ED+++ Q+ LAAAEK + E + E TP V+ + +E
Sbjct: 129 EDLSQ-QAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEE 168
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 27.3 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 87 EDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKE 127
ED+++ Q+ LAAAEK + E + E TP V+ + +E
Sbjct: 1992 EDLSQ-QAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEE 2031
>gi|5031931 nascent polypeptide-associated complex alpha subunit
isoform b [Homo sapiens]
Length = 215
Score = 27.3 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 87 EDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKE 127
ED+++ Q+ LAAAEK + E + E TP V+ + +E
Sbjct: 129 EDLSQ-QAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEE 168
>gi|163965364 nascent polypeptide-associated complex alpha subunit
isoform b [Homo sapiens]
Length = 215
Score = 27.3 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 87 EDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKE 127
ED+++ Q+ LAAAEK + E + E TP V+ + +E
Sbjct: 129 EDLSQ-QAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEE 168
>gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Homo
sapiens]
Length = 489
Score = 26.9 bits (58), Expect = 9.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 89 ITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAFGLPIT 143
I+ P + A+ A A+ QG + + + + EA R+G G+PIT
Sbjct: 66 ISSPMDTVTEADMAIAMAKFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPIT 120
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,965,713
Number of Sequences: 37866
Number of extensions: 258830
Number of successful extensions: 676
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 661
Number of HSP's gapped (non-prelim): 23
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.