Guide to the Human Genome
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Name: SEPT10 Sequence: fasta or formatted (454aa) NCBI GI: 21945064
Description:

septin 10 isoform 1

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt prot [431aa] septin 10 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         20           2
 C cysteine            1.8          8           1
 D aspartate           4.6         21           3
 E glutamate          10.4         47           3
 F phenylalanine       5.1         23           1
 G glycine             4.2         19           1
 H histidine           3.3         15           1
 I isoleucine          5.3         24           2
 K lysine              8.8         40           3
 L leucine             8.8         40           2
 M methionine          3.3         15           1
 N asparagine          4.8         22           1
 P proline             2.2         10           1
 Q glutamine           5.9         27           2
 R arginine            5.1         23           2
 S serine              6.8         31           2
 T threonine           5.7         26           2
 V valine              6.6         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   septin 10 isoform 1 
SEPT10                0.933   septin 10 isoform 2 
SEPT11                0.704   septin 11 
SEPT8                 0.687   septin 8 isoform a 
SEPT8                 0.687   septin 8 isoform b 
SEPT6                 0.687   septin 6 isoform B 
SEPT8                 0.686   septin 8 isoform c 
SEPT6                 0.685   septin 6 isoform D 
SEPT6                 0.685   septin 6 isoform A 
SEPT6                 0.685   septin 6 isoform A 
SEPT14                0.673   septin 14 
SEPT8                 0.604   septin 8 isoform d 
SEPT7                 0.323   cell division cycle 10 isoform 1 
SEPT7                 0.323   cell division cycle 10 isoform 2 
SEPT3                 0.261   septin 3 isoform A 
SEPT3                 0.261   septin 3 isoform B 
SEPT5                 0.259   septin 5 
SEPT4                 0.258   septin 4 isoform 1 
SEPT4                 0.258   septin 4 isoform 3 
SEPT9                 0.253   septin 9 isoform f 
SEPT9                 0.253   septin 9 isoform d 
SEPT9                 0.253   septin 9 isoform e 
SEPT9                 0.253   septin 9 isoform b 
SEPT9                 0.253   septin 9 isoform e 
SEPT9                 0.253   septin 9 isoform a 
SEPT9                 0.253   septin 9 isoform c 
SEPT2                 0.250   septin 2 
SEPT2                 0.250   septin 2 
SEPT2                 0.250   septin 2 
SEPT2                 0.250   septin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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