SPATA18 13550

Name: SPATA18	Sequence: fasta or formatted (538aa)		NCBI GI: 21687119
Description: spermatogenesis associated 18 homolog		Referenced in: Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 42 3 C cysteine 2.8 15 2 D aspartate 6.1 33 2 E glutamate 6.5 35 3 F phenylalanine 3.2 17 1 G glycine 2.6 14 2 H histidine 1.5 8 1 I isoleucine 4.1 22 2 K lysine 5.4 29 2 L leucine 9.5 51 2 M methionine 1.7 9 1 N asparagine 5.4 29 1 P proline 4.5 24 2 Q glutamine 5.6 30 2 R arginine 9.3 50 2 S serine 11.7 63 2 T threonine 3.5 19 1 V valine 5.8 31 2 W tryptophan 1.1 6 1 Y tyrosine 2.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spermatogenesis associated 18 homolog SON 0.026 SON DNA-binding protein isoform F SON 0.026 SON DNA-binding protein isoform B FKBP15 0.026 FK506 binding protein 15, 133kDa MYH7B 0.022 myosin, heavy polypeptide 7B, cardiac muscle, beta ... ERC2 0.022 cytomatrix protein p110 SFRS12 0.021 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.021 splicing factor, arginine/serine-rich 12 isoform b [... CCDC18 0.020 sarcoma antigen NY-SAR-41 ERC1 0.019 RAB6-interacting protein 2 isoform epsilon ERC1 0.019 RAB6-interacting protein 2 isoform delta LOC728080 0.019 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.019 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653720 0.019 PREDICTED: similar to Golgin subfamily A member 8-l... PMFBP1 0.019 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.019 polyamine modulated factor 1 binding protein 1 isof... ZRANB2 0.019 zinc finger protein 265 isoform 1 EEA1 0.019 early endosome antigen 1, 162kD MYH7 0.018 myosin, heavy chain 7, cardiac muscle, beta LOC645202 0.018 PREDICTED: hypothetical protein LOC645202 RNF8 0.018 ring finger protein 8 isoform 2 RNF8 0.018 ring finger protein 8 isoform 1 MYH6 0.018 myosin heavy chain 6 FAM184B 0.018 hypothetical protein LOC27146 SFRS4 0.018 splicing factor, arginine/serine-rich 4 LOC727909 0.018 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.018 PREDICTED: Golgin subfamily A member 8-like protein... GOLGA2 0.017 Golgi autoantigen, golgin subfamily a, 2 ZRANB2 0.017 zinc finger protein 265 isoform 2 ZC3H18 0.017 zinc finger CCCH-type containing 18 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.