Search of human proteins with 216548560

Search of human proteins with 216548560

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|216548560 hypothetical protein LOC51093 isoform 1 [Homo
sapiens]
         (475 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|216548560 hypothetical protein LOC51093 isoform 1 [Homo sapiens]   952   0.0  
gi|216548564 hypothetical protein LOC51093 isoform 2 [Homo sapiens]   425   e-119
gi|39930471 hypothetical protein LOC84190 [Homo sapiens]               95   2e-19
gi|68448528 mesothelin-like [Homo sapiens]                             35   0.11 
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]     32   1.6  
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]     32   1.6  
gi|51477690 tripartite motif-containing 6 and tripartite motif-c...    32   1.6  
gi|33356148 formin-like 1 [Homo sapiens]                               31   2.1  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         29   8.2  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         29   8.2  

>gi|216548560 hypothetical protein LOC51093 isoform 1 [Homo sapiens]
          Length = 475

 Score =  952 bits (2461), Expect = 0.0
 Identities = 475/475 (100%), Positives = 475/475 (100%)

Query: 1   MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60
           MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK
Sbjct: 1   MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60

Query: 61  PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120
           PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS
Sbjct: 61  PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120

Query: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180
           RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK
Sbjct: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180

Query: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQVVQTSPRHSPHHVVRWVDPTALCEELLL 240
           SIEGDQRLVERAQRLDQELLQALEKEEKRNPQVVQTSPRHSPHHVVRWVDPTALCEELLL
Sbjct: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQVVQTSPRHSPHHVVRWVDPTALCEELLL 240

Query: 241 PLENPCQGRARLLLTGLHACGDLSVALLRHFSCCPEVVALASVGCCYMKLSDPGGYPLSQ 300
           PLENPCQGRARLLLTGLHACGDLSVALLRHFSCCPEVVALASVGCCYMKLSDPGGYPLSQ
Sbjct: 241 PLENPCQGRARLLLTGLHACGDLSVALLRHFSCCPEVVALASVGCCYMKLSDPGGYPLSQ 300

Query: 301 WVAGLPGYELPYRLREGACHALEEYAERLQKAGPGLRTHCYRAALETVIRRARPELRRPG 360
           WVAGLPGYELPYRLREGACHALEEYAERLQKAGPGLRTHCYRAALETVIRRARPELRRPG
Sbjct: 301 WVAGLPGYELPYRLREGACHALEEYAERLQKAGPGLRTHCYRAALETVIRRARPELRRPG 360

Query: 361 VQGIPRVHELKIEEYVQRGLQRVGLDPQLPLNLAALQAHVAQENRVVAFFSLALLLAPLV 420
           VQGIPRVHELKIEEYVQRGLQRVGLDPQLPLNLAALQAHVAQENRVVAFFSLALLLAPLV
Sbjct: 361 VQGIPRVHELKIEEYVQRGLQRVGLDPQLPLNLAALQAHVAQENRVVAFFSLALLLAPLV 420

Query: 421 ETLILLDRLLYLQEQGFHAELLPIFSPELSPRNLVLVATKMPLGQALSVLETEDS 475
           ETLILLDRLLYLQEQGFHAELLPIFSPELSPRNLVLVATKMPLGQALSVLETEDS
Sbjct: 421 ETLILLDRLLYLQEQGFHAELLPIFSPELSPRNLVLVATKMPLGQALSVLETEDS 475


>gi|216548564 hypothetical protein LOC51093 isoform 2 [Homo sapiens]
          Length = 277

 Score =  425 bits (1093), Expect = e-119
 Identities = 212/213 (99%), Positives = 213/213 (100%)

Query: 1   MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60
           MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK
Sbjct: 1   MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60

Query: 61  PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120
           PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS
Sbjct: 61  PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120

Query: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180
           RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK
Sbjct: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180

Query: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQV 213
           SIEGDQRLVERAQRLDQELLQALEKEEKRNPQ+
Sbjct: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQI 213


>gi|39930471 hypothetical protein LOC84190 [Homo sapiens]
          Length = 603

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 80/233 (34%), Positives = 113/233 (48%), Gaps = 37/233 (15%)

Query: 253 LLTGLHACGDLSVALLRHFSCCPEVVALASVGCCYMKLS------------DPGGYPL-- 298
           L+ GLH CGDL+   LR F+   E+  + SVGCCY  LS            +  G+P+  
Sbjct: 380 LMVGLHTCGDLAPNTLRIFTSNSEIKGVCSVGCCYHLLSEEFENQHKERTQEKWGFPMCH 439

Query: 299 ----SQWVAGLPGYELPYRLREGACHALEEYAERLQKAGPGLRTHC--YRAALETVIRRA 352
                +W  G          R  AC ALE  A     AG GL T    YRA L+ +I+  
Sbjct: 440 YLKEERWCCG-------RNARMSACLALERVA-----AGQGLPTESLFYRAVLQDIIKDC 487

Query: 353 RPELRRPGVQGIPRVHELKIEEYVQRGLQRVGLD-PQLP--LNLAALQAHVAQENRVVAF 409
               +     G          +YV+R L+++GLD  +LP  + +   + +  + N + AF
Sbjct: 488 YGITKCDRHVGKIYSKCSSFLDYVRRSLKKLGLDESKLPEKIIMNYYEKYKPRMNELEAF 547

Query: 410 FSLALLLAPLVETLILLDRLLYLQEQGFHA--ELLPIFSPELSPRNLVLVATK 460
             L ++LAP +ETLILLDRL YL+EQ   A   L+ +F P  SPR   ++A K
Sbjct: 548 NMLKVVLAPCIETLILLDRLCYLKEQEDIAWSALVKLFDPVKSPRCYAVIALK 600



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 29/194 (14%)

Query: 30  SILDAYIIEFFTDNLWDTL--------------PCSWQEALDGLKPPQLATMLLGMPGEG 75
           SI +A+ ++F+T+++W+ L                S  EAL     P     L+    E 
Sbjct: 32  SISNAHTVDFYTESVWEELVDLPPETVLAALRKSASETEAL-----PSETRPLVEAEWEA 86

Query: 76  EVVRYRSVWPLT---LLALKSTACALAFTRMP--GFQTPSEFL-----ENPSQSSRLTAP 125
            +  +  ++  T   L+++++ A A  +  +   G  TP E L      N +Q       
Sbjct: 87  GMTDFPKIFCETSQKLVSVEAFALAAKYYSVQNLGICTPFEQLLVALRGNQNQRIGENQK 146

Query: 126 FRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVKSIEGD 185
             + +  KK HE++ + EL+  ++D+ G  QV+D+GSG+G+LS F++L  GL V  I+  
Sbjct: 147 AVEFMNMKKSHEVQAMSELISSIADYYGIKQVIDLGSGKGYLSSFLSLKYGLKVYGIDSS 206

Query: 186 QRLVERAQRLDQEL 199
                 A+  +++L
Sbjct: 207 NTNTHGAEERNRKL 220


>gi|68448528 mesothelin-like [Homo sapiens]
          Length = 1053

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 12/150 (8%)

Query: 58  GLKPPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALA--FTRMPGFQTPSEFL-E 114
           GL+PPQ      G  GE  V R R    L+ LA  ++ C L   FT  P    P+  L  
Sbjct: 392 GLRPPQRGRAPTGCHGESRVTRERRSAQLSCLANLASRCGLQDDFTLHP----PNLLLFY 447

Query: 115 NPSQSSRLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRF-MAL 173
           N SQ     A  R  +R   Q ++  L  L  +            VG+G G       +L
Sbjct: 448 NLSQVRE--ADCRAFIRRAAQGDVELLSHLPDQRVALWRAAVACLVGAGWGWARCIGGSL 505

Query: 174 GLGLMVKSIEGDQRLVERAQRLDQELLQAL 203
            LG  + +++G  RL  R    DQ+LL AL
Sbjct: 506 PLGADLLALQGVARL--RLSASDQQLLGAL 533


>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
          Length = 488

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 194 RLDQELLQALEKEEKRNPQVVQTSPRHSPHHVVRWVDPTALCEELLLPLENPCQGRARLL 253
           R++Q  L+ LE+EEK+  ++++ +     H        T    EL+  LE  CQG    L
Sbjct: 196 RVEQRELKKLEQEEKKGLRIIEEAENDLVHQ-------TQSLRELISDLERRCQGSTMEL 248

Query: 254 L 254
           L
Sbjct: 249 L 249


>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
          Length = 516

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 194 RLDQELLQALEKEEKRNPQVVQTSPRHSPHHVVRWVDPTALCEELLLPLENPCQGRARLL 253
           R++Q  L+ LE+EEK+  ++++ +     H        T    EL+  LE  CQG    L
Sbjct: 224 RVEQRELKKLEQEEKKGLRIIEEAENDLVHQ-------TQSLRELISDLERRCQGSTMEL 276

Query: 254 L 254
           L
Sbjct: 277 L 277


>gi|51477690 tripartite motif-containing 6 and tripartite
           motif-containing 34 [Homo sapiens]
          Length = 842

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 194 RLDQELLQALEKEEKRNPQVVQTSPRHSPHHVVRWVDPTALCEELLLPLENPCQGRARLL 253
           R++Q  L+ LE+EEK+  ++++ +     H        T    EL+  LE  CQG    L
Sbjct: 224 RVEQRELKKLEQEEKKGLRIIEEAENDLVHQ-------TQSLRELISDLERRCQGSTMEL 276

Query: 254 L 254
           L
Sbjct: 277 L 277


>gi|33356148 formin-like 1 [Homo sapiens]
          Length = 1100

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 310 LPYRLREGACHALEEYAE---RLQKAGPGLRTHCYRAALETVIRRAR----PELRRPGVQ 362
           L  RLR+    ++ + AE   +L +A   L T   R +  T +  +R    PE   P   
Sbjct: 411 LTERLRDAENESMAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAP 470

Query: 363 GIPRVHELKIEEYVQRGLQRVGLDPQLPLNLAALQAHVA 401
             P   ELK+EE  ++GL R+   P   +++  L   VA
Sbjct: 471 TRPSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVA 509


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 161  GSGQGHLSRFMALGLGLMVKSIEGDQRLVERAQRLD-QELLQALEKE------EKRNPQV 213
            G+G+ + SRF   G G  +++I   ++ V   ++L  Q+ L+  E E      E RN  +
Sbjct: 3627 GAGRDNSSRFSLNG-GANIEAIIASEKEVWNREKLTLQKSLKRAEAEVYKLKAELRNDSL 3685

Query: 214  VQTSPRHSPHHVVRWVDPTALCEELLLPLENPCQGRARLLLTGLHACGDLSVALL 268
            +QT    S H  ++ +    L  E         +    LLL G   C D ++ALL
Sbjct: 3686 LQTLSPDSEHVTLKRIYGKYLRAESFRKALIYQKKYLLLLLGGFQECEDATLALL 3740


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 161  GSGQGHLSRFMALGLGLMVKSIEGDQRLVERAQRLD-QELLQALEKE------EKRNPQV 213
            G+G+ + SRF   G G  +++I   ++ V   ++L  Q+ L+  E E      E RN  +
Sbjct: 3619 GAGRDNSSRFSLNG-GANIEAIIASEKEVWNREKLTLQKSLKRAEAEVYKLKAELRNDSL 3677

Query: 214  VQTSPRHSPHHVVRWVDPTALCEELLLPLENPCQGRARLLLTGLHACGDLSVALL 268
            +QT    S H  ++ +    L  E         +    LLL G   C D ++ALL
Sbjct: 3678 LQTLSPDSEHVTLKRIYGKYLRAESFRKALIYQKKYLLLLLGGFQECEDATLALL 3732


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,000,873
Number of Sequences: 37866
Number of extensions: 886443
Number of successful extensions: 2444
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2433
Number of HSP's gapped (non-prelim): 14
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.