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Search of human proteins with 213688348
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|213688348 XG glycoprotein isoform 3 precursor [Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|213688348 XG glycoprotein isoform 3 precursor [Homo sapiens] 399 e-112
gi|28212220 XG glycoprotein isoform 1 precursor [Homo sapiens] 393 e-110
gi|213688346 XG glycoprotein isoform 2 precursor [Homo sapiens] 383 e-107
gi|4505183 CD99 antigen isoform a precursor [Homo sapiens] 53 2e-07
gi|41281670 CD99 antigen-like 2 isoform E3-E4 [Homo sapiens] 50 8e-07
gi|171543879 CD99 antigen isoform b precursor [Homo sapiens] 48 4e-06
gi|71067336 CD99 antigen-like 2 isoform E3'-E4'-E3-E4 [Homo sapi... 46 2e-05
gi|41281656 CD99 antigen-like 2 isoform E4 [Homo sapiens] 43 2e-04
gi|153281158 dual specificity phosphatase 8 [Homo sapiens] 40 0.001
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 39 0.003
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.004
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.004
gi|33356148 formin-like 1 [Homo sapiens] 38 0.005
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 37 0.007
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 37 0.007
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 37 0.007
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.007
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.007
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 37 0.009
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 37 0.009
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 37 0.012
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 37 0.012
gi|157168329 formin 1 [Homo sapiens] 37 0.012
gi|122056628 prion protein preproprotein [Homo sapiens] 37 0.012
gi|122056625 prion protein preproprotein [Homo sapiens] 37 0.012
gi|122056623 prion protein preproprotein [Homo sapiens] 37 0.012
gi|34335270 prion protein preproprotein [Homo sapiens] 37 0.012
gi|4506113 prion protein preproprotein [Homo sapiens] 37 0.012
gi|119395716 forkhead box C1 [Homo sapiens] 37 0.012
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 37 0.012
>gi|213688348 XG glycoprotein isoform 3 precursor [Homo sapiens]
Length = 181
Score = 399 bits (1026), Expect = e-112
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 60
MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD
Sbjct: 1 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 60
Query: 61 SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 120
SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN
Sbjct: 61 SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 120
Query: 121 SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 180
SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN
Sbjct: 121 SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 180
Query: 181 V 181
V
Sbjct: 181 V 181
>gi|28212220 XG glycoprotein isoform 1 precursor [Homo sapiens]
Length = 180
Score = 393 bits (1010), Expect = e-110
Identities = 180/181 (99%), Positives = 180/181 (99%), Gaps = 1/181 (0%)
Query: 1 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 60
MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD
Sbjct: 1 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 60
Query: 61 SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 120
SGGNIYPRPKPRPQPQPGNSGNSGG YFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN
Sbjct: 61 SGGNIYPRPKPRPQPQPGNSGNSGG-YFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 119
Query: 121 SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 180
SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN
Sbjct: 120 SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 179
Query: 181 V 181
V
Sbjct: 180 V 180
>gi|213688346 XG glycoprotein isoform 2 precursor [Homo sapiens]
Length = 195
Score = 383 bits (984), Expect = e-107
Identities = 180/196 (91%), Positives = 180/196 (91%), Gaps = 16/196 (8%)
Query: 1 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 60
MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD
Sbjct: 1 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 60
Query: 61 SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 120
SGGNIYPRPKPRPQPQPGNSGNSGG YFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN
Sbjct: 61 SGGNIYPRPKPRPQPQPGNSGNSGG-YFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 119
Query: 121 SDNTH---------------GGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFK 165
SDNTH GGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFK
Sbjct: 120 SDNTHGRGGYRLNSRYGNTYGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFK 179
Query: 166 LNNRRNCFRTHEPENV 181
LNNRRNCFRTHEPENV
Sbjct: 180 LNNRRNCFRTHEPENV 195
>gi|4505183 CD99 antigen isoform a precursor [Homo sapiens]
Length = 185
Score = 52.8 bits (125), Expect = 2e-07
Identities = 50/155 (32%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 25 FDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDS---GGNIYPRPK--PRPQPQPGN 79
FDL+DAL D E KKP + PK KP + D+ G N PRP P+P P P
Sbjct: 26 FDLSDALPDNE-NKKPTA--IPK-KPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNP 81
Query: 80 SGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEGN 139
+ S F+D D DG +GG G G S G S G E
Sbjct: 82 NHPSSSGSFSDADLADG----------VSGGEGKGGSDGGGSHRKEG----------EEA 121
Query: 140 MVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFR 174
++ IV VVV + GA +S+ ++ CF+
Sbjct: 122 DAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFK 156
>gi|41281670 CD99 antigen-like 2 isoform E3-E4 [Homo sapiens]
Length = 213
Score = 50.4 bits (119), Expect = 8e-07
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 39/189 (20%)
Query: 7 LPCLAFLCFLMHARGQRDFD---LADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDSGG 63
L CLAF + RG DFD L DA+ + K+ + + K P +
Sbjct: 9 LVCLAFSLATLVQRGSGDFDDFNLEDAVKETSSVKQRWNHVTTTTKRPVTTRA------- 61
Query: 64 NIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDN 123
P GN + + + DRDDGR P GGGG+S D
Sbjct: 62 ---------PANTLGNDFDLADALDDRNDRDDGRRKPI--------AGGGGFSDKDLEDI 104
Query: 124 THGGDHHSTYGNPEGN----------MVAK--IVSPIVSVVVVTLLGAAASYFKLNNRRN 171
GG++ G +G MVA+ ++ + S + + L+GA +SY ++
Sbjct: 105 VGGGEYKPDKGKGDGRYGSNDDPGSGMVAEPGTIAGVASALAMALIGAVSSYISYQQKKF 164
Query: 172 CFRTHEPEN 180
CF + N
Sbjct: 165 CFSIQQGLN 173
>gi|171543879 CD99 antigen isoform b precursor [Homo sapiens]
Length = 169
Score = 48.1 bits (113), Expect = 4e-06
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 46/151 (30%)
Query: 24 DFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNS 83
DFDL DA+ D E N D P+P NP P+P P P + S
Sbjct: 36 DFDLGDAVVDGE-----NDD----------PRPPNP-----------PKPMPNPNPNHPS 69
Query: 84 GGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEGNMVAK 143
F+D D DG +GG G G S G S G E
Sbjct: 70 SSGSFSDADLADG----------VSGGEGKGGSDGGGSHRKEG----------EEADAPG 109
Query: 144 IVSPIVSVVVVTLLGAAASYFKLNNRRNCFR 174
++ IV VVV + GA +S+ ++ CF+
Sbjct: 110 VIPGIVGAVVVAVAGAISSFIAYQKKKLCFK 140
>gi|71067336 CD99 antigen-like 2 isoform E3'-E4'-E3-E4 [Homo
sapiens]
Length = 262
Score = 45.8 bits (107), Expect = 2e-05
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 56/222 (25%)
Query: 7 LPCLAFLCFLMHARGQRDFD---LADALDDPEPTKKP--NSDIYPKPKPPYYPQPENPDS 61
L CLAF + RG DFD L DA+ + K+P ++ +P P P
Sbjct: 9 LVCLAFSLATLVQRGSGDFDDFNLEDAVKETSSVKQPWDHTTTTTTNRPGTTRAPAKPPG 68
Query: 62 GGNIYP---------RPKP----------------------RPQPQPGNSGNSGGSYFND 90
G R KP P GN + + +
Sbjct: 69 SGLDLADALDDQDDGRRKPGIGGRERWNHVTTTTKRPVTTRAPANTLGNDFDLADALDDR 128
Query: 91 VDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEGN----------M 140
DRDDGR P GGGG+S D GG++ G +G M
Sbjct: 129 NDRDDGRRKPI--------AGGGGFSDKDLEDIVGGGEYKPDKGKGDGRYGSNDDPGSGM 180
Query: 141 VAK--IVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 180
VA+ ++ + S + + L+GA +SY ++ CF + N
Sbjct: 181 VAEPGTIAGVASALAMALIGAVSSYISYQQKKFCFSIQQGLN 222
>gi|41281656 CD99 antigen-like 2 isoform E4 [Homo sapiens]
Length = 190
Score = 42.7 bits (99), Expect = 2e-04
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 20/101 (19%)
Query: 92 DRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEGN----------MV 141
DRDDGR P GGGG+S D GG++ G +G MV
Sbjct: 58 DRDDGRRKPI--------AGGGGFSDKDLEDIVGGGEYKPDKGKGDGRYGSNDDPGSGMV 109
Query: 142 AK--IVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 180
A+ ++ + S + + L+GA +SY ++ CF + N
Sbjct: 110 AEPGTIAGVASALAMALIGAVSSYISYQQKKFCFSIQQGLN 150
>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
Length = 625
Score = 40.0 bits (92), Expect = 0.001
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Query: 54 PQPENPDSGGNIYPRPKPRPQPQPGNSGNSG----GSYFNDVDRDDGRY-------PPRP 102
P P++PD+ PRP+ RP+P G+ S G F D R R+ P P
Sbjct: 438 PSPDSPDAAPEARPRPRRRPRPPAGSPARSPAHSLGLNFGDAARQTPRHGLSALSAPGLP 497
Query: 103 RPRPPAGGG 111
P PAG G
Sbjct: 498 GPGQPAGPG 506
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 38.5 bits (88), Expect = 0.003
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 37 TKKPNSDIYPKPK--PPYYPQPENPDS-------GGNIYPRPK-------PRPQPQPGNS 80
+K +S+ +P+ PP YP P + G N P P P+ P P ++
Sbjct: 305 SKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHN 364
Query: 81 GNSGGSYFNDVDRDDGRYPPRPRPRPPA----GGGGGGYSSYGNSDNTH 125
+ Y V P +PRPP+ GGGGGG G+S +++
Sbjct: 365 SGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSN 413
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.1 bits (87), Expect = 0.004
Identities = 32/110 (29%), Positives = 39/110 (35%), Gaps = 13/110 (11%)
Query: 38 KKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGR 97
+ P Y P+P P P SGG I+ Q G+ G GG Y G
Sbjct: 755 RNPQMPQYSSPQPGSALSPRQP-SGGQIHTGMGSYQQNSMGSYGPQGGQY-----GPQGG 808
Query: 98 YPPRPRPRP------PAGGGGGGYSSYGNSDNTHGGDHHSTYGN-PEGNM 140
YP +P P+ G GG + G HG YG P G M
Sbjct: 809 YPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRM 858
Score = 29.6 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 78 GNSGNSGGSYFN-DVDRDDGRYPPRPR-----PRPPAGGGGGGYSSYG 119
G +G+ GG D+ +G PRP PP GGGGG G
Sbjct: 86 GGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVG 133
Score = 28.5 bits (62), Expect = 3.3
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 40 PNSDIYPKPKPPY-YPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRY 98
PN YP P P Y P G +P P S +S S F R+
Sbjct: 217 PNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSF-----AQQRF 271
Query: 99 PPRPRPRPPAGGGG 112
P A GGG
Sbjct: 272 GAMGGGGPSAAGGG 285
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.1 bits (87), Expect = 0.004
Identities = 32/110 (29%), Positives = 39/110 (35%), Gaps = 13/110 (11%)
Query: 38 KKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGR 97
+ P Y P+P P P SGG I+ Q G+ G GG Y G
Sbjct: 755 RNPQMPQYSSPQPGSALSPRQP-SGGQIHTGMGSYQQNSMGSYGPQGGQY-----GPQGG 808
Query: 98 YPPRPRPRP------PAGGGGGGYSSYGNSDNTHGGDHHSTYGN-PEGNM 140
YP +P P+ G GG + G HG YG P G M
Sbjct: 809 YPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRM 858
Score = 29.6 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 78 GNSGNSGGSYFN-DVDRDDGRYPPRPR-----PRPPAGGGGGGYSSYG 119
G +G+ GG D+ +G PRP PP GGGGG G
Sbjct: 86 GGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVG 133
Score = 28.5 bits (62), Expect = 3.3
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 40 PNSDIYPKPKPPY-YPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRY 98
PN YP P P Y P G +P P S +S S F R+
Sbjct: 217 PNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSF-----AQQRF 271
Query: 99 PPRPRPRPPAGGGG 112
P A GGG
Sbjct: 272 GAMGGGGPSAAGGG 285
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 37.7 bits (86), Expect = 0.005
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 15/78 (19%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDR 93
P P + P S P P P+P P P P P P PG
Sbjct: 552 PSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGT-------------- 597
Query: 94 DDGRYPPRPRPRPPAGGG 111
DG PP P P PP GG
Sbjct: 598 -DGPVPPPPPPPPPPPGG 614
Score = 32.0 bits (71), Expect = 0.30
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 34 PEPTKKPN--SDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGG 85
PEP P D+ P P PP P P + G + P P P P P PG ++ G
Sbjct: 572 PEPPPAPPLPGDLPPPPPPP----PPPPGTDGPV-PPPPPPPPPPPGGPPDALG 620
Score = 30.4 bits (67), Expect = 0.87
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 12/91 (13%)
Query: 29 DALDDPEPTKKPNSDIYP--KPKPPYYPQPENPDSG----GNIYPRPKPRPQPQPGNSGN 82
DA PT P+ D+ P +P P P P P G P P+ P PG+
Sbjct: 515 DAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEP 574
Query: 83 SGGSYFNDVDRDDGRYPPRPRPRPPAGGGGG 113
G PP P P PP G G
Sbjct: 575 PPAPPL------PGDLPPPPPPPPPPPGTDG 599
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.4 bits (85), Expect = 0.007
Identities = 29/84 (34%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 34 PEPTKKPNSDIYPKPKP----PYYPQPEN----PDSGGNIYPRPKPRPQPQPGNSGNS-- 83
P P D P P P P P N P GG P P P P P PGN G +
Sbjct: 172 PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG 231
Query: 84 GGSYFNDVDRDDGRYPPRPRPRPP 107
GGS + RP P PP
Sbjct: 232 GGSIRQSPLSSSSPFSNRP-PLPP 254
Score = 29.6 bits (65), Expect = 1.5
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 46 PKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGN----SGNSGGSYFNDVDRDDGRYPPR 101
P P PP P P P +P Q G S S G +D P
Sbjct: 2 PVPPPPAPPPP--PTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPIL 59
Query: 102 PRPRPP-AGGGGGGYSSYGNSDNTHGGDHHSTYG 134
+P+ AGGGGGG+ G GG ++G
Sbjct: 60 DKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFG 93
Score = 26.9 bits (58), Expect = 9.6
Identities = 21/74 (28%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 40 PNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPR--PQPQPGNSGNSGGSYFNDVDRDDGR 97
P+ + KP PP P P P P P+ P P S S R
Sbjct: 256 PSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSR 315
Query: 98 YPPRPRPRPPAGGG 111
P P P PP+ G
Sbjct: 316 --PGPPPLPPSSSG 327
Score = 26.9 bits (58), Expect = 9.6
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 46 PKPKPPYY-PQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRP 104
P P PP P P D G P P P P + G++ + + + G PR P
Sbjct: 356 PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPA-TPQLPSRSGVDSPRSGP 414
Query: 105 RPP 107
RPP
Sbjct: 415 RPP 417
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.4 bits (85), Expect = 0.007
Identities = 29/84 (34%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 34 PEPTKKPNSDIYPKPKP----PYYPQPEN----PDSGGNIYPRPKPRPQPQPGNSGNS-- 83
P P D P P P P P N P GG P P P P P PGN G +
Sbjct: 172 PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG 231
Query: 84 GGSYFNDVDRDDGRYPPRPRPRPP 107
GGS + RP P PP
Sbjct: 232 GGSIRQSPLSSSSPFSNRP-PLPP 254
Score = 29.6 bits (65), Expect = 1.5
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 46 PKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGN----SGNSGGSYFNDVDRDDGRYPPR 101
P P PP P P P +P Q G S S G +D P
Sbjct: 2 PVPPPPAPPPP--PTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPIL 59
Query: 102 PRPRPP-AGGGGGGYSSYGNSDNTHGGDHHSTYG 134
+P+ AGGGGGG+ G GG ++G
Sbjct: 60 DKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFG 93
Score = 26.9 bits (58), Expect = 9.6
Identities = 21/74 (28%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 40 PNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPR--PQPQPGNSGNSGGSYFNDVDRDDGR 97
P+ + KP PP P P P P P+ P P S S R
Sbjct: 256 PSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSR 315
Query: 98 YPPRPRPRPPAGGG 111
P P P PP+ G
Sbjct: 316 --PGPPPLPPSSSG 327
Score = 26.9 bits (58), Expect = 9.6
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 46 PKPKPPYY-PQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRP 104
P P PP P P D G P P P P + G++ + + + G PR P
Sbjct: 356 PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPA-TPQLPSRSGVDSPRSGP 414
Query: 105 RPP 107
RPP
Sbjct: 415 RPP 417
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 37.4 bits (85), Expect = 0.007
Identities = 33/111 (29%), Positives = 37/111 (33%), Gaps = 20/111 (18%)
Query: 34 PEPTKKPNSDIY------PKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSY 87
P PT P + P P PP P P G P P P P PG G
Sbjct: 147 PGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPG- 205
Query: 88 FNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEG 138
G+ P P+P GGG G S+ G H H G P G
Sbjct: 206 ----GPKGGKMPGGPKP-----GGGPGLSTPGG----HPKPPHRGGGEPRG 243
Score = 28.5 bits (62), Expect = 3.3
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQP 77
P P + P+ PP P P P P P+P Q QP
Sbjct: 62 PPPPHQQQQQPPPQQPPPQQPPPHQPP------PHPQPHQQQQP 99
Score = 26.9 bits (58), Expect = 9.6
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENP--DSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDV 91
P P + P P P+P QP P DS + + P P P G++ + S
Sbjct: 77 PPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQ-GPGPAPGVGSAPPASSSAPPAT 135
Query: 92 DRDDGRYP---PRPRPRPP 107
G P P P P PP
Sbjct: 136 PPTSGAPPGSGPGPTPTPP 154
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.007
Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 16/101 (15%)
Query: 41 NSDIYPKPKPPY--YPQPENPDSGGNIYP-RPKPRPQPQPGNSGNSGGSYFNDVDRDDGR 97
+ D YP P P Y PQP P YP P P+P QP G G
Sbjct: 10 SGDNYPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPG------------- 56
Query: 98 YPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEG 138
YP P P P G G Y G + + + P+G
Sbjct: 57 YPHGPSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQG 97
Score = 28.5 bits (62), Expect = 3.3
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 45 YPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSG-GSYFNDVD 92
YP+ P P P NP ++P P PQ GN G SY+++ D
Sbjct: 99 YPQGPYPQSPFPPNPYGQPQVFPGQDP-DSPQHGNYQEEGPPSYYDNQD 146
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.007
Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 16/101 (15%)
Query: 41 NSDIYPKPKPPY--YPQPENPDSGGNIYP-RPKPRPQPQPGNSGNSGGSYFNDVDRDDGR 97
+ D YP P P Y PQP P YP P P+P QP G G
Sbjct: 10 SGDNYPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPG------------- 56
Query: 98 YPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEG 138
YP P P P G G Y G + + + P+G
Sbjct: 57 YPHGPSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQG 97
Score = 28.5 bits (62), Expect = 3.3
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 45 YPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSG-GSYFNDVD 92
YP+ P P P NP ++P P PQ GN G SY+++ D
Sbjct: 99 YPQGPYPQSPFPPNPYGQPQVFPGQDP-DSPQHGNYQEEGPPSYYDNQD 146
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 37.0 bits (84), Expect = 0.009
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 14/99 (14%)
Query: 46 PKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRP- 104
P+ P++ P +P GG + P P P P G GG+ PP P P
Sbjct: 673 PRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGN----------EPPPPPPPF 722
Query: 105 ---RPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEGNM 140
R GGG G GG H + P G M
Sbjct: 723 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGM 761
Score = 33.1 bits (74), Expect = 0.13
Identities = 32/110 (29%), Positives = 36/110 (32%), Gaps = 13/110 (11%)
Query: 46 PKPKPPYYPQPENPDSGGNIYPRPKP----------RPQPQPGNS-GNSGGSYFNDVDRD 94
P P PP+ GG R P RP PG GNS G ++
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGG 775
Query: 95 DGRYPPRPRPRPPA--GGGGGGYSSYGNSDNTHGGDHHSTYGNPEGNMVA 142
RP P GGGGG G GG H + P G M A
Sbjct: 776 GMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGA 825
Score = 27.7 bits (60), Expect = 5.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 62 GGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDG---RYPP--RPRPRPPAGGGGGGYS 116
GG++ RP PG+ G G +DV G R PP R G GGGG+
Sbjct: 836 GGSMGGSGGHRPHEGPGHGGPHGHRP-HDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHR 894
Query: 117 SYGNSDNTHGGD 128
+ + ++HGGD
Sbjct: 895 GH-DGGHSHGGD 905
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 37.0 bits (84), Expect = 0.009
Identities = 33/114 (28%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPR-PQPQPGNS--------GNSG 84
P+ KKP P P P P P+ S + P KP+ P PQ GN G
Sbjct: 184 PQGGKKPQGP--PPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 241
Query: 85 GSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGGDHHSTYGNPEG 138
G ++ G PP PPA GG S+ G NP+G
Sbjct: 242 GPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEG-NNPQG 294
Score = 32.0 bits (71), Expect = 0.30
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDR 93
P+ KP P PP PQ P GGN KP+ P PG G D R
Sbjct: 41 PQGGNKPQGP----PPPPGKPQGP-PPQGGN-----KPQGPPPPGKP--QGPPPQGDKSR 88
Query: 94 DDGRYPPRPRPRPPAGG 110
P +P+ PP GG
Sbjct: 89 SPRSPPGKPQGPPPQGG 105
Score = 30.4 bits (67), Expect = 0.87
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPR-PQPQPGNS--------GNSG 84
P+ KP P P P P P+ S P KP+ P PQ GN G
Sbjct: 62 PQGGNKPQGP--PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 119
Query: 85 GSYFNDVDRDDGRYPP-RPRPRPPAG 109
G +R G PP +P+ PP G
Sbjct: 120 GPPPQGGNRPQGPPPPGKPQGPPPQG 145
Score = 30.4 bits (67), Expect = 0.87
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 48 PKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPP 107
P PP PQ P GGN +P+ P PG G D R P +P+ PP
Sbjct: 112 PPPPGKPQGP-PPQGGN-----RPQGPPPPGKP--QGPPPQGDKSRSPRSPPGKPQGPPP 163
Query: 108 AGG 110
GG
Sbjct: 164 QGG 166
Score = 30.4 bits (67), Expect = 0.87
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 48 PKPPYYPQPENPDSGGNIYPRPKP-RPQPQPGNSGNSGGSYFNDVDRDDGRYPP--RPRP 104
P PP PQ P + PR P +PQ P GN + G PP +P+
Sbjct: 132 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN----------QPQGPPPPPGKPQG 181
Query: 105 RPPAGG 110
PP GG
Sbjct: 182 PPPQGG 187
Score = 30.4 bits (67), Expect = 0.87
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 40 PNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYP 99
P P+ PP +P+ P G KP+ P PG G D R P
Sbjct: 163 PQGGNQPQGPPPPPGKPQGPPPQGG----KKPQGPPPPGKP--QGPPPQGDKSRSSQSPP 216
Query: 100 PRPRPRPPAGG 110
+P+ PP GG
Sbjct: 217 GKPQGPPPQGG 227
Score = 27.3 bits (59), Expect = 7.3
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 40 PNSDIYPKPK-PPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRY 98
P D P+ PP PQ P GGN P+ P P +P GG + G
Sbjct: 143 PQGDKSRSPRSPPGKPQGP-PPQGGN-QPQGPPPPPGKPQGPPPQGGK------KPQGPP 194
Query: 99 PP-RPRPRPPAG 109
PP +P+ PP G
Sbjct: 195 PPGKPQGPPPQG 206
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 36.6 bits (83), Expect = 0.012
Identities = 41/149 (27%), Positives = 54/149 (36%), Gaps = 42/149 (28%)
Query: 19 ARGQRDFDLADALDDP------EPTKKPNSDIYPK-----PKPPYYPQPENPDS------ 61
+RG D D P PT P S + PK P+ P Y QP+ S
Sbjct: 81 SRGSPRKAATDGADTPFGRSESAPTLHPYSPLSPKGRPSSPRTPLYLQPDAYGSLDRATS 140
Query: 62 ---------GGNIYPRPKPRPQPQP-------------GNSGNSGGSYFNDVDRDDGRYP 99
G ++ P PRP P P G +G+ GS + +P
Sbjct: 141 PRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPFDFLGRAGSPRGSPL--AEGPQAFFP 198
Query: 100 PR-PRPRPPAGGGGGGYSSYGNSDNTHGG 127
R P PRPPA S++G+S GG
Sbjct: 199 ERGPSPRPPATAYDAPASAFGSSLLGSGG 227
Score = 28.5 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 40 PNSDIYPKPKPP-YYPQPENPDSGGNIYPRPKPRPQPQP 77
P S ++ + PP PQP+ P+P+P+ QPQP
Sbjct: 393 PGSPLFTRAPPPKLQPQPQ---------PQPQPQSQPQP 422
Score = 27.7 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQ 76
P P +P P+P+P PQP+ P P+P+ QPQ
Sbjct: 402 PPPKLQPQPQ--PQPQPQSQPQPQLP---------PQPQTQPQ 433
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 36.6 bits (83), Expect = 0.012
Identities = 41/149 (27%), Positives = 54/149 (36%), Gaps = 42/149 (28%)
Query: 19 ARGQRDFDLADALDDP------EPTKKPNSDIYPK-----PKPPYYPQPENPDS------ 61
+RG D D P PT P S + PK P+ P Y QP+ S
Sbjct: 81 SRGSPRKAATDGADTPFGRSESAPTLHPYSPLSPKGRPSSPRTPLYLQPDAYGSLDRATS 140
Query: 62 ---------GGNIYPRPKPRPQPQP-------------GNSGNSGGSYFNDVDRDDGRYP 99
G ++ P PRP P P G +G+ GS + +P
Sbjct: 141 PRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPFDFLGRAGSPRGSPL--AEGPQAFFP 198
Query: 100 PR-PRPRPPAGGGGGGYSSYGNSDNTHGG 127
R P PRPPA S++G+S GG
Sbjct: 199 ERGPSPRPPATAYDAPASAFGSSLLGSGG 227
Score = 28.5 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 40 PNSDIYPKPKPP-YYPQPENPDSGGNIYPRPKPRPQPQP 77
P S ++ + PP PQP+ P+P+P+ QPQP
Sbjct: 393 PGSPLFTRAPPPKLQPQPQ---------PQPQPQSQPQP 422
Score = 27.7 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQ 76
P P +P P+P+P PQP+ P P+P+ QPQ
Sbjct: 402 PPPKLQPQPQ--PQPQPQSQPQPQLP---------PQPQTQPQ 433
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 36.6 bits (83), Expect = 0.012
Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDR 93
P P P S P P PP P P P S P P P P P N GG
Sbjct: 667 PAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP------- 719
Query: 94 DDGRYPPRPRPRPPAG 109
PP P PP G
Sbjct: 720 PPAPPPPGLAPPPPPG 735
Score = 27.7 bits (60), Expect = 5.6
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDR 93
P P P S P P PP P P+S P P P PG + F +
Sbjct: 686 PPPPLPPPSSAGPPPPPP---PPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGLGS 742
Query: 94 DDGRYPPRPRPRP 106
+ P +P P
Sbjct: 743 SSSQCPRKPAIEP 755
>gi|122056628 prion protein preproprotein [Homo sapiens]
Length = 253
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 72 RPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGG---- 127
+ +P+PG N+GGS R G+ P PP GGGG G G HGG
Sbjct: 23 KKRPKPGG-WNTGGS------RYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQ 75
Query: 128 DHHSTYGNPEG 138
H +G P G
Sbjct: 76 PHGGGWGQPHG 86
>gi|122056625 prion protein preproprotein [Homo sapiens]
Length = 253
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 72 RPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGG---- 127
+ +P+PG N+GGS R G+ P PP GGGG G G HGG
Sbjct: 23 KKRPKPGG-WNTGGS------RYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQ 75
Query: 128 DHHSTYGNPEG 138
H +G P G
Sbjct: 76 PHGGGWGQPHG 86
>gi|122056623 prion protein preproprotein [Homo sapiens]
Length = 253
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 72 RPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGG---- 127
+ +P+PG N+GGS R G+ P PP GGGG G G HGG
Sbjct: 23 KKRPKPGG-WNTGGS------RYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQ 75
Query: 128 DHHSTYGNPEG 138
H +G P G
Sbjct: 76 PHGGGWGQPHG 86
>gi|34335270 prion protein preproprotein [Homo sapiens]
Length = 253
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 72 RPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGG---- 127
+ +P+PG N+GGS R G+ P PP GGGG G G HGG
Sbjct: 23 KKRPKPGG-WNTGGS------RYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQ 75
Query: 128 DHHSTYGNPEG 138
H +G P G
Sbjct: 76 PHGGGWGQPHG 86
>gi|4506113 prion protein preproprotein [Homo sapiens]
Length = 253
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 72 RPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHGG---- 127
+ +P+PG N+GGS R G+ P PP GGGG G G HGG
Sbjct: 23 KKRPKPGG-WNTGGS------RYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQ 75
Query: 128 DHHSTYGNPEG 138
H +G P G
Sbjct: 76 PHGGGWGQPHG 86
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 36.6 bits (83), Expect = 0.012
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 14/95 (14%)
Query: 20 RGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGN 79
R +R F DA+ D E +K + P P P P P+ P P+P P
Sbjct: 169 RRRRRFKKKDAVKDKE--EKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVR---- 222
Query: 80 SGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGG 114
D+ ++G P P+P PA G G
Sbjct: 223 --------IQDIKTENGTCPSPPQPLSPAAALGSG 249
Score = 28.1 bits (61), Expect = 4.3
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 78 GNSGNSGGSYFNDVDRDDGRYPPRPRPRPPA------GGGGGGYSSYGNSDNTHGGDHHS 131
G G +GGS +D D PP + GGGGGG G+ H G S
Sbjct: 414 GAPGGAGGSAVDD-PLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTS 472
Query: 132 TYGNPEGNMVAKIVS 146
Y N G + + S
Sbjct: 473 WYLNQAGGDLGHLAS 487
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 36.6 bits (83), Expect = 0.012
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 40 PNSDIYPKPKPPYYPQ--PENPDSGGNIY--PRPKPRPQPQPGNSGNSGGSYFNDVD-RD 94
P S +P PP PQ P P G + P P + ++G G + +D R+
Sbjct: 1201 PTSPRQLQPAPPLAPQGRPWTPGQPGGLVGCPGSGGSPMRRETSAGFQNGLNYIAIDVRE 1260
Query: 95 DGRYPPRPRPRPPAGGGGGGYSSYGNSDNTHG 126
+ PP+P+P PP G SS+G + + G
Sbjct: 1261 EPGLPPQPQPPPPPLPQPGDKSSWGRTRSLGG 1292
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 59 PDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPA------GGG- 111
P G + R P + S GS + G YPP P P PP G G
Sbjct: 420 PAGGALQHSRSMSMPVAHSPPAATSPGSLSSSSGHGSGSYPPPPGPHPPLPHPLHHGPGQ 479
Query: 112 --GGGYSSYGNSDNTHGGDHHSTYGNPEGNMVA 142
G +S S + G YG+ G++ A
Sbjct: 480 RPSSGSASASGSPSDPGFMSLDEYGSSPGDLRA 512
Score = 27.7 bits (60), Expect = 5.6
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 21/84 (25%)
Query: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDR 93
P P+ P+S + P P PP + G +Y P P + S +D
Sbjct: 1019 PRPSASPSSSLQPPPPPP---------APGELYRLP-PASAVATAQGPGAASSLSSDTG- 1067
Query: 94 DDGRY----------PPRPRPRPP 107
D+G Y PP+P PP
Sbjct: 1068 DNGDYTEMAFGVAATPPQPIAAPP 1091
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.139 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,276,639
Number of Sequences: 37866
Number of extensions: 871041
Number of successful extensions: 7360
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 558
Number of HSP's that attempted gapping in prelim test: 4755
Number of HSP's gapped (non-prelim): 2357
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.