Guide to the Human Genome
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Name: FAM22G Sequence: fasta or formatted (492aa) NCBI GI: 113865921
Description:

hypothetical protein LOC441457

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         45           3
 C cysteine            1.6          8           1
 D aspartate           3.3         16           2
 E glutamate           7.7         38           3
 F phenylalanine       2.6         13           1
 G glycine             8.1         40           2
 H histidine           1.8          9           1
 I isoleucine          1.8          9           1
 K lysine              3.7         18           1
 L leucine             9.3         46           3
 M methionine          2.4         12           1
 N asparagine          1.2          6           1
 P proline            16.1         79           5
 Q glutamine           5.9         29           1
 R arginine            4.5         22           2
 S serine              5.9         29           1
 T threonine           5.1         25           1
 V valine              6.9         34           2
 W tryptophan          1.4          7           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC441457 
FAM22F                0.950   hypothetical protein LOC54754 
FAM22D                0.866   hypothetical protein LOC728130 
FAM22E                0.864   PREDICTED: hypothetical protein isoform 1 
FAM22B                0.847   PREDICTED: hypothetical protein isoform 1 
FAM22A                0.843   hypothetical protein LOC728118 
FAM22E                0.841   PREDICTED: hypothetical protein 
C15orf55              0.432   nuclear protein in testis 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
LOC100291797          0.029   PREDICTED: hypothetical protein XP_002345651 
LOC100291443          0.029   PREDICTED: hypothetical protein XP_002346504 
LOC100289394          0.029   PREDICTED: hypothetical protein XP_002342316 
BRD4                  0.028   bromodomain-containing protein 4 isoform long 
PRR12                 0.028   proline rich 12 
PELP1                 0.026   proline, glutamic acid and leucine rich protein 1 [...
ZNF414                0.026   zinc finger protein 414 isoform 1 
ZNF414                0.026   zinc finger protein 414 isoform 2 
DIAPH1                0.024   diaphanous 1 isoform 2 
DIAPH1                0.024   diaphanous 1 isoform 1 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.024   PREDICTED: hypothetical protein LOC80164 
WDR33                 0.024   WD repeat domain 33 isoform 1 
SAMD1                 0.024   sterile alpha motif domain containing 1 
SFRS15                0.024   splicing factor, arginine/serine-rich 15 isoform 3 ...
HTT                   0.023   huntingtin 
PRDM2                 0.023   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.023   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.023   retinoblastoma protein-binding zinc finger protein i...
APBB1IP               0.023   amyloid beta (A4) precursor protein-binding, family ...
WASL                  0.022   Wiskott-Aldrich syndrome gene-like protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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