LOC643563 1338

Name: LOC643563	Sequence: fasta or formatted (105aa)		NCBI GI: 113430525
Description: PREDICTED: similar to EEF1A1 protein		Referenced in: Translation Factors
Other entries for this name: alt mRNA [105aa] PREDICTED: similar to EEF1A1 protein alt mRNA [105aa] PREDICTED: similar to EEF1A1 protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 6 2 C cysteine 1.9 2 1 D aspartate 3.8 4 1 E glutamate 7.6 8 1 F phenylalanine 3.8 4 2 G glycine 6.7 7 1 H histidine 3.8 4 1 I isoleucine 6.7 7 1 K lysine 11.4 12 1 L leucine 9.5 10 3 M methionine 1.9 2 1 N asparagine 3.8 4 1 P proline 3.8 4 1 Q glutamine 1.9 2 1 R arginine 4.8 5 1 S serine 5.7 6 1 T threonine 7.6 8 2 V valine 3.8 4 1 W tryptophan 2.9 3 1 Y tyrosine 2.9 3 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to EEF1A1 protein LOC643563 1.000 PREDICTED: similar to EEF1A1 protein LOC643563 1.000 PREDICTED: similar to EEF1A1 protein EEF1A1 0.510 eukaryotic translation elongation factor 1 alpha 1 [H... LOC100293909 0.505 PREDICTED: similar to eukaryotic translation elonga... EEF1A2 0.505 eukaryotic translation elongation factor 1 alpha 2 [H... HBS1L 0.214 Hsp70 subfamily B suppressor 1-like protein isoform... HBS1L 0.214 Hsp70 subfamily B suppressor 1-like protein isoform 1... GSPT1 0.168 G1 to S phase transition 1 isoform 3 GSPT1 0.168 G1 to S phase transition 1 isoform 2 GSPT1 0.168 G1 to S phase transition 1 isoform 1 GSPT2 0.163 peptide chain release factor 3 TUFM 0.026 Tu translation elongation factor, mitochondrial prec... RSF1 0.015 remodeling and spacing factor 1 SYNE1 0.015 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.015 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.015 spectrin repeat containing, nuclear envelope 1 isof... ABCD1 0.010 ATP-binding cassette, sub-family D (ALD), member 1 [H... DOCK4 0.010 dedicator of cytokinesis 4 RBBP9 0.005 retinoblastoma binding protein 9 ABCD2 0.005 ATP-binding cassette, sub-family D, member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.