Guide to the Human Genome
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Name: ZNF10 Sequence: fasta or formatted (573aa) NCBI GI: 21314662
Description:

zinc finger protein 10

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4         14           1
 C cysteine            5.4         31           2
 D aspartate           3.7         21           1
 E glutamate           7.7         44           2
 F phenylalanine       4.0         23           2
 G glycine             5.9         34           2
 H histidine           7.0         40           2
 I isoleucine          4.5         26           2
 K lysine              7.9         45           2
 L leucine             7.5         43           2
 M methionine          0.7          4           1
 N asparagine          4.0         23           1
 P proline             2.8         16           1
 Q glutamine           5.9         34           2
 R arginine            5.9         34           1
 S serine              8.9         51           2
 T threonine           6.5         37           1
 V valine              4.4         25           2
 W tryptophan          1.2          7           1
 Y tyrosine            3.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 10 
ZNF180                0.446   zinc finger protein 180 
ZNF135                0.426   zinc finger protein 135 
ZNF184                0.419   zinc finger protein 184 
ZNF569                0.417   zinc finger protein 569 
ZNF300                0.414   zinc finger protein 300 
ZNF568                0.405   zinc finger protein 568 
ZNF624                0.405   zinc finger protein 624 
ZNF630                0.405   zinc finger protein 630 
ZNF470                0.399   zinc finger protein 470 
ZNF570                0.399   zinc finger protein 570 
ZNF606                0.397   zinc finger protein 606 
DKFZp686E2433         0.397   hypothetical protein LOC345462 
ZFP90                 0.390   zinc finger protein 90 
ZNF583                0.389   zinc finger protein 583 
ZNF583                0.389   zinc finger protein 583 
ZNF583                0.389   zinc finger protein 583 
ZNF527                0.387   zinc finger protein 527 
ZNF471                0.386   zinc finger protein 471 
ZNF12                 0.386   zinc finger protein 12 isoform b 
ZNF268                0.384   zinc finger protein 268 
ZNF565                0.381   zinc finger protein 565 
ZNF565                0.381   zinc finger protein 565 
ZNF182                0.380   zinc finger protein 21 isoform 1 
ZNF182                0.379   zinc finger protein 21 isoform 2 
ZNF41                 0.379   zinc finger protein 41 
ZNF41                 0.379   zinc finger protein 41 
ZNF420                0.379   zinc finger protein 420 
ZNF287                0.377   zinc finger protein 287 
ZNF726                0.376   PREDICTED: zinc finger protein 726 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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