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Search of human proteins with 211904149
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|211904149 DAZ associated protein 2 isoform f [Homo sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|211904149 DAZ associated protein 2 isoform f [Homo sapiens] 325 1e-89
gi|7661886 DAZ associated protein 2 isoform a [Homo sapiens] 268 1e-72
gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens] 220 4e-58
gi|211904135 DAZ associated protein 2 isoform b [Homo sapiens] 213 7e-56
gi|211904142 DAZ associated protein 2 isoform d [Homo sapiens] 187 3e-48
gi|211904145 DAZ associated protein 2 isoform e [Homo sapiens] 104 3e-23
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 45 2e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.001
gi|21703710 scotin [Homo sapiens] 38 0.003
gi|24430132 WW domain binding protein 2 [Homo sapiens] 38 0.003
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 37 0.007
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 37 0.007
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 37 0.007
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens] 37 0.007
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens] 37 0.007
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 37 0.007
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens] 37 0.007
gi|40807465 zinc finger protein 341 [Homo sapiens] 37 0.009
gi|150417989 cyclin K isoform 1 [Homo sapiens] 37 0.009
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 36 0.011
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.015
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 36 0.015
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 36 0.015
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 36 0.015
gi|116256340 SEC31 homolog A isoform 3 [Homo sapiens] 36 0.015
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 35 0.019
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 35 0.019
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 35 0.019
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 35 0.025
>gi|211904149 DAZ associated protein 2 isoform f [Homo sapiens]
Length = 153
Score = 325 bits (832), Expect = 1e-89
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
Query: 121 TAGNIPVKEDQDHDREQGEEDNGDNNLERRGKM 153
TAGNIPVKEDQDHDREQGEEDNGDNNLERRGKM
Sbjct: 121 TAGNIPVKEDQDHDREQGEEDNGDNNLERRGKM 153
>gi|7661886 DAZ associated protein 2 isoform a [Homo sapiens]
Length = 168
Score = 268 bits (685), Expect = 1e-72
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
Query: 121 TAGNIP 126
TAGNIP
Sbjct: 121 TAGNIP 126
>gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens]
Length = 207
Score = 220 bits (560), Expect = 4e-58
Identities = 102/103 (99%), Positives = 102/103 (99%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGST 103
MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP ST
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPAST 103
>gi|211904135 DAZ associated protein 2 isoform b [Homo sapiens]
Length = 146
Score = 213 bits (541), Expect = 7e-56
Identities = 104/126 (82%), Positives = 104/126 (82%), Gaps = 22/126 (17%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
MSAA IPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
Sbjct: 61 MSAA----------------------IPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 98
Query: 121 TAGNIP 126
TAGNIP
Sbjct: 99 TAGNIP 104
>gi|211904142 DAZ associated protein 2 isoform d [Homo sapiens]
Length = 136
Score = 187 bits (475), Expect = 3e-48
Identities = 94/126 (74%), Positives = 94/126 (74%), Gaps = 32/126 (25%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE---------------- 44
Query: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
Sbjct: 45 ----------------SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 88
Query: 121 TAGNIP 126
TAGNIP
Sbjct: 89 TAGNIP 94
>gi|211904145 DAZ associated protein 2 isoform e [Homo sapiens]
Length = 86
Score = 104 bits (260), Expect = 3e-23
Identities = 50/64 (78%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE P P AA +
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSEPPPPG-CPPNAAQLAV 59
Query: 61 MSAA 64
M A
Sbjct: 60 MQGA 63
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 8 PTQPTY-PVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
PT P+Y P P +P P+ + PQ+P YT + P+YS PS+ PT + P
Sbjct: 1792 PTSPSYSPTSPSYSPSSPR--YTPQSPTYTPSSPSYSP-SSPSYSPTSPKYTPTSPSYSP 1848
Query: 67 GASLYLPMAQSVA-VGPLGSTIPMAYYPVGPIYPP 100
+ Y P + + P S Y P P Y P
Sbjct: 1849 SSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 42.4 bits (98), Expect = 2e-04
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPG 67
PT P Y + PG + P +P Y+ P+YS P++ + PT + P
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPT-SPNYSPTSPSYSPTSPSYSPT 1653
Query: 68 ASLYLPMAQSVA-VGPLGSTIPMAYYPVGPIYPPGS 102
+ Y P + S + P S +Y P P Y P S
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1689
Score = 33.9 bits (76), Expect = 0.056
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 15/89 (16%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPG 67
PT PTY P +PVY P +P Y+ P YS P + + T PT S P
Sbjct: 1890 PTSPTY---SPTSPVY-----TPTSPKYSPTSPTYSPT-SPKY----SPTSPTYSPTSPK 1936
Query: 68 ASLYLPMAQSVAVGPLGSTIPMAYYPVGP 96
S Y P S P T + + P
Sbjct: 1937 GSTYSP--TSPGYSPTSPTYSLTSPAISP 1963
Score = 30.8 bits (68), Expect = 0.47
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 18 PGNPVYPQTLHLPQ-----APPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASLYL 72
PG+P P + ++P +P Y+ PAY + + PT + P + Y
Sbjct: 1572 PGSPG-PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 73 PMAQSVA-VGPLGSTIPMAYYPVGPIYPPGS 102
P + + + P S +Y P P Y P S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.7 bits (91), Expect = 0.001
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 14 PVQPPGNPVYPQTLHLPQAPPYTDAPPAY----SELYRPSFVHPGAATVPTMSAAFPGAS 69
P P P+ P PQAPP APP P+ P +P+ A+FPG +
Sbjct: 483 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 542
Query: 70 LYLPMAQSVAVGPLGSTIPMA 90
+ P A S+ + PL + P A
Sbjct: 543 PFSPSA-SLPMSPLATPPPQA 562
Score = 36.6 bits (83), Expect = 0.009
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 6 QYPTQPTYPVQPPGNPVYPQ-TLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAA 64
Q PT P P + + Q LP APP APP+ L P P AT S
Sbjct: 314 QSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 373
Query: 65 FPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
+LP S + PL + P A P PP
Sbjct: 374 LQATHSFLP---SPPLSPLATPPPQA--PPALALPP 404
Score = 35.8 bits (81), Expect = 0.015
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLP--QAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAF 65
P+ P P+ P P P L LP QAPP A P S L PS P A V + A F
Sbjct: 382 PSPPLSPLATPP-PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 440
Query: 66 ---PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P + P + + S P + P PP
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 478
Score = 30.8 bits (68), Expect = 0.47
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 8 PTQPTY-PVQPPGNP-VYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAF 65
P+ P P PP +P V P QAPP APP P+ + P A
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 503
Query: 66 PGASLYLPMAQSVAVGPLG-STIPMAYYPVGPIYPPG 101
P A+ L +A+ P +T P+ P P PG
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPG 540
Score = 27.7 bits (60), Expect = 4.0
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 11 PTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSF-VHPGAATVPTMSA------ 63
P+ P PG + + LP +P T P A L P V P PT+ A
Sbjct: 532 PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 591
Query: 64 -----AFPGASLYLPMAQSVAVGPLGSTIPMAYYP--VGPIYPPGSTVLVEGGYDAGARF 116
+ G L L +A P S P G ST GYD+G
Sbjct: 592 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 651
Query: 117 GAGAT 121
GA A+
Sbjct: 652 GAAAS 656
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 0.001
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 14 PVQPPGNPVYPQTLHLPQAPPYTDAPPAY----SELYRPSFVHPGAATVPTMSAAFPGAS 69
P P P+ P PQAPP APP P+ P +P+ A+FPG +
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 503
Query: 70 LYLPMAQSVAVGPLGSTIPMA 90
+ P A S+ + PL + P A
Sbjct: 504 PFSPSA-SLPMSPLATPPPQA 523
Score = 35.8 bits (81), Expect = 0.015
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLP--QAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAF 65
P+ P P+ P P P L LP QAPP A P S L PS P A V + A F
Sbjct: 343 PSPPLSPLATPP-PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 401
Query: 66 ---PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P + P + + S P + P PP
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 439
Score = 32.7 bits (73), Expect = 0.12
Identities = 28/94 (29%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 9 TQPTYPVQPPGNPVY--PQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
T P P P+ P P APP APP+ L P P AT S
Sbjct: 277 TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Query: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
+LP S + PL + P A P PP
Sbjct: 337 ATHSFLP---SPPLSPLATPPPQA--PPALALPP 365
Score = 30.8 bits (68), Expect = 0.47
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 8 PTQPTY-PVQPPGNP-VYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAF 65
P+ P P PP +P V P QAPP APP P+ + P A
Sbjct: 405 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 464
Query: 66 PGASLYLPMAQSVAVGPLG-STIPMAYYPVGPIYPPG 101
P A+ L +A+ P +T P+ P P PG
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPG 501
Score = 27.7 bits (60), Expect = 4.0
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 11 PTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSF-VHPGAATVPTMSA------ 63
P+ P PG + + LP +P T P A L P V P PT+ A
Sbjct: 493 PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 552
Query: 64 -----AFPGASLYLPMAQSVAVGPLGSTIPMAYYP--VGPIYPPGSTVLVEGGYDAGARF 116
+ G L L +A P S P G ST GYD+G
Sbjct: 553 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 612
Query: 117 GAGAT 121
GA A+
Sbjct: 613 GAAAS 617
>gi|21703710 scotin [Homo sapiens]
Length = 240
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 6 QYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELY 46
QYP P YP QP G P Y +TL A PY + P Y+ Y
Sbjct: 194 QYP--PPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAY 232
Score = 28.5 bits (62), Expect = 2.3
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 8 PTQPTYPVQPP--GNPVYPQTLHLPQAPPYTD---APPAYSELYRPSFVHPGAATVPTMS 62
P+ Y PP G P P + P PPY PPAY E P A+ P +
Sbjct: 172 PSYQGYHTMPPQPGMPAAPYPMQYP--PPYPAQPMGPPAYHETLAGGAAAPYPASQPPYN 229
Query: 63 AAFPGA 68
A+ A
Sbjct: 230 PAYMDA 235
>gi|24430132 WW domain binding protein 2 [Homo sapiens]
Length = 261
Score = 38.1 bits (87), Expect = 0.003
Identities = 30/101 (29%), Positives = 35/101 (34%), Gaps = 8/101 (7%)
Query: 3 SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTD-APPAYSELYRPSFVHPGAATVPT- 60
+ G YP P YP PP YP + A Y PP Y P P + P
Sbjct: 160 ANGMYPCPPGYPYPPPPPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVSGPDVPSTPAA 219
Query: 61 -MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
AA AS Y P +P + P P YPP
Sbjct: 220 EAKAAEAAASAYYNPG-----NPHNVYMPTSQPPPPPYYPP 255
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 37.0 bits (84), Expect = 0.007
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 10 QPTYPVQPPGNPVYPQTLHLPQAPPYTDAPP---AYSELYRPSFVHPGAATVPTMSAAFP 66
QP P P G V + LP P P A ++ +P PG T+P +
Sbjct: 273 QPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLA 332
Query: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVE 107
++ LP AVG + P + P PPG + V+
Sbjct: 333 QPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQ 373
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 37.0 bits (84), Expect = 0.007
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPG 67
P +P PV+P P PQ P A P Y Y PS P PT A P
Sbjct: 172 PPRPPPPVRPVPQGTPPVVEEQPQPPL---AMPPYPLPYSPS---PSLPVGPTAHGALPP 225
Query: 68 ASLYLPMAQSVAVGPLGSTIPMA 90
A + S GPLG T P A
Sbjct: 226 APFPVVSQPSFYSGPLGPTYPAA 248
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 37.0 bits (84), Expect = 0.007
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 15 VQPPGNPVYPQTLHLP-QAPPYTDA----PPAYSELYRPSFVHP----GAATVPTMSAAF 65
VQ P YP + +P Q Y A PP S+ ++P+ P AA P + AA
Sbjct: 723 VQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAAT 782
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P +S Y+P G PMA+YP P++ P
Sbjct: 783 PYSS-YIPYNPQQFPGQPAMMQPMAHYPSQPVFAP 816
Score = 28.1 bits (61), Expect = 3.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 3 SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSEL-YRPSFVHPGAATVPTM 61
+KG P Q + QP P Q PP A P S + Y P PG +
Sbjct: 747 AKGSLPPQRSDQHQPASAPPMMQAA-AAAGPPLVAATPYSSYIPYNPQ-QFPGQPAMMQP 804
Query: 62 SAAFPGASLYLPMAQS 77
A +P ++ PM QS
Sbjct: 805 MAHYPSQPVFAPMLQS 820
>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
Length = 1044
Score = 37.0 bits (84), Expect = 0.007
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 15 VQPPGNPVYPQTLHLP-QAPPYTDA----PPAYSELYRPSFVHP----GAATVPTMSAAF 65
VQ P YP + +P Q Y A PP S+ ++P+ P AA P + AA
Sbjct: 723 VQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAAT 782
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P +S Y+P G PMA+YP P++ P
Sbjct: 783 PYSS-YIPYNPQQFPGQPAMMQPMAHYPSQPVFAP 816
Score = 28.1 bits (61), Expect = 3.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 3 SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSEL-YRPSFVHPGAATVPTM 61
+KG P Q + QP P Q PP A P S + Y P PG +
Sbjct: 747 AKGSLPPQRSDQHQPASAPPMMQAA-AAAGPPLVAATPYSSYIPYNPQ-QFPGQPAMMQP 804
Query: 62 SAAFPGASLYLPMAQS 77
A +P ++ PM QS
Sbjct: 805 MAHYPSQPVFAPMLQS 820
>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
Length = 1097
Score = 37.0 bits (84), Expect = 0.007
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 15 VQPPGNPVYPQTLHLP-QAPPYTDA----PPAYSELYRPSFVHP----GAATVPTMSAAF 65
VQ P YP + +P Q Y A PP S+ ++P+ P AA P + AA
Sbjct: 723 VQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAAT 782
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P +S Y+P G PMA+YP P++ P
Sbjct: 783 PYSS-YIPYNPQQFPGQPAMMQPMAHYPSQPVFAP 816
Score = 28.1 bits (61), Expect = 3.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 3 SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSEL-YRPSFVHPGAATVPTM 61
+KG P Q + QP P Q PP A P S + Y P PG +
Sbjct: 747 AKGSLPPQRSDQHQPASAPPMMQAA-AAAGPPLVAATPYSSYIPYNPQ-QFPGQPAMMQP 804
Query: 62 SAAFPGASLYLPMAQS 77
A +P ++ PM QS
Sbjct: 805 MAHYPSQPVFAPMLQS 820
>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
Length = 1075
Score = 37.0 bits (84), Expect = 0.007
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 15 VQPPGNPVYPQTLHLP-QAPPYTDA----PPAYSELYRPSFVHP----GAATVPTMSAAF 65
VQ P YP + +P Q Y A PP S+ ++P+ P AA P + AA
Sbjct: 723 VQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAAT 782
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P +S Y+P G PMA+YP P++ P
Sbjct: 783 PYSS-YIPYNPQQFPGQPAMMQPMAHYPSQPVFAP 816
Score = 28.1 bits (61), Expect = 3.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 3 SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSEL-YRPSFVHPGAATVPTM 61
+KG P Q + QP P Q PP A P S + Y P PG +
Sbjct: 747 AKGSLPPQRSDQHQPASAPPMMQAA-AAAGPPLVAATPYSSYIPYNPQ-QFPGQPAMMQP 804
Query: 62 SAAFPGASLYLPMAQS 77
A +P ++ PM QS
Sbjct: 805 MAHYPSQPVFAPMLQS 820
>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
Length = 1044
Score = 37.0 bits (84), Expect = 0.007
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 15 VQPPGNPVYPQTLHLP-QAPPYTDA----PPAYSELYRPSFVHP----GAATVPTMSAAF 65
VQ P YP + +P Q Y A PP S+ ++P+ P AA P + AA
Sbjct: 723 VQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAAT 782
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P +S Y+P G PMA+YP P++ P
Sbjct: 783 PYSS-YIPYNPQQFPGQPAMMQPMAHYPSQPVFAP 816
Score = 28.1 bits (61), Expect = 3.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 3 SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSEL-YRPSFVHPGAATVPTM 61
+KG P Q + QP P Q PP A P S + Y P PG +
Sbjct: 747 AKGSLPPQRSDQHQPASAPPMMQAA-AAAGPPLVAATPYSSYIPYNPQ-QFPGQPAMMQP 804
Query: 62 SAAFPGASLYLPMAQS 77
A +P ++ PM QS
Sbjct: 805 MAHYPSQPVFAPMLQS 820
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 36.6 bits (83), Expect = 0.009
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 16/132 (12%)
Query: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGA-ATVP 59
M+S Y TQP P PP LP PP PP L P +PG V
Sbjct: 168 MHSVPSYLTQPPPPPPPPP--------PLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVE 219
Query: 60 TMSAAFPGASLYLPMAQSVAVGPL------GSTIPMAYYPVGPIYPPGSTVLVEGGYDAG 113
SAA P A Q++ + P + YP +Y PG G +
Sbjct: 220 VYSAAAPLAGSGTVEIQALGMQPYPPLEVPNQCVEPPVYPTPTVYSPGKQGFKPKGPNPA 279
Query: 114 ARFGAGATAGNI 125
A AT G +
Sbjct: 280 APM-TSATGGTV 290
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 36.6 bits (83), Expect = 0.009
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSA-AF 65
YP P P PP +P P P Y PP Y+ P+F P PT +
Sbjct: 478 YPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYN----PNFPPPPPRLPPTHAVPPH 533
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P L LP A P + P PV P PP
Sbjct: 534 PPPGLGLPPASY----PPPAVPPGGQPPVPPPIPP 564
Score = 26.6 bits (57), Expect = 8.9
Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 17/90 (18%)
Query: 17 PPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASLYLPMAQ 76
PP P +P +H P P+ PP PS G +T S+ G +
Sbjct: 402 PP--PAHPAPVHQPPPLPHRPPPPP------PSSYMTGMSTT---SSYMSGEGYQSLQSM 450
Query: 77 SVAVGPLGSTIPMAYYPVG------PIYPP 100
GP +P AY P +YPP
Sbjct: 451 MKTEGPSYGALPPAYGPPAHLPYHPHVYPP 480
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 36.2 bits (82), Expect = 0.011
Identities = 30/107 (28%), Positives = 38/107 (35%), Gaps = 9/107 (8%)
Query: 4 KGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRP-------SFVHPGAA 56
K + P P P P P+ L P APP AP +E P S PG A
Sbjct: 505 KAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVA 564
Query: 57 TVPTMSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGST 103
PT+ + G S + S P+ +P P P P T
Sbjct: 565 AAPTLVSG--GGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPT 609
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.8 bits (81), Expect = 0.015
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 9 TQPTYPVQ-PPGNPVYPQTLHLPQAPP-YTDAPPAYSELYRPSFVHP--GAATVPTMSAA 64
T P+ P PP +P L LP +PP T PA S L P +HP +++ + S
Sbjct: 442 TSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQ 501
Query: 65 FPGASLYLP 73
P +SL +P
Sbjct: 502 APLSSLIMP 510
Score = 35.4 bits (80), Expect = 0.019
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLP--QAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAF 65
P+ P P+ P P P L LP QAPP A P S L PS P A V + A F
Sbjct: 607 PSPPLSPLATPP-PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 665
Query: 66 ---PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P + P + + S P + P PP
Sbjct: 666 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 703
Score = 33.5 bits (75), Expect = 0.073
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 14 PVQPPGN-PVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASLYL 72
P PP + P+ P PQAPP PP + +P+ A+FPG + +
Sbjct: 769 PPSPPASLPMSPLAKPPPQAPPALATPPLQA--------------LPSPPASFPGQAPFS 814
Query: 73 PMAQSVAVGPLGSTIPMA 90
P A S+ + PL + P A
Sbjct: 815 PSA-SLPMSPLATPPPQA 831
Score = 32.3 bits (72), Expect = 0.16
Identities = 31/98 (31%), Positives = 35/98 (35%), Gaps = 20/98 (20%)
Query: 14 PVQPPGN----------PVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAA----TVP 59
PV PP N P P LP APP APP+ L P P A T P
Sbjct: 316 PVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTP 375
Query: 60 TMSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPI 97
M A P + +P Q P T P P P+
Sbjct: 376 PMQA--PPSLQTIPPIQV----PHSLTSPSLQAPPSPL 407
Score = 30.0 bits (66), Expect = 0.81
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 14 PVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSF--VHPGAATVPTMSAAFPGASLY 71
P P P+ P PQAPP APP P+ + P A P + L
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQ 767
Query: 72 LPMA--QSVAVGPLGSTIPMA 90
+P + S+ + PL P A
Sbjct: 768 VPPSPPASLPMSPLAKPPPQA 788
Score = 27.7 bits (60), Expect = 4.0
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 11 PTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSF-VHPGAATVPTMSA------ 63
P+ P PG + + LP +P T P A L P V P PT+ A
Sbjct: 801 PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 860
Query: 64 -----AFPGASLYLPMAQSVAVGPLGSTIPMAYYP--VGPIYPPGSTVLVEGGYDAGARF 116
+ G L L +A P S P G ST GYD+G
Sbjct: 861 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 920
Query: 117 GAGAT 121
GA A+
Sbjct: 921 GAAAS 925
Score = 27.3 bits (59), Expect = 5.2
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 8 PTQPTYPVQPPGNPVYP--QTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVP 59
P P+ PP P QTL P A P + APP+ + P P T+P
Sbjct: 336 PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTT--PPMQAPPSLQTIP 387
Score = 27.3 bits (59), Expect = 5.2
Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 8 PTQPTY-PVQPPGNP-VYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAF 65
P+ P P PP +P V P QAPP APP P+ + P A
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Query: 66 PGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPP 100
P A+ L + S P S P A P P PP
Sbjct: 729 PLAAPPLQVPPSPPASPPMS--PSATPP--PRVPP 759
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 35.8 bits (81), Expect = 0.015
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 8 PTQPTYPVQPPGNPV-YPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
P PV P PV P T+ PQ PP+ PP L P+F P P P
Sbjct: 657 PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFG---P 713
Query: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVG---PIYPPGS 102
G P + G +P + P G PI PP S
Sbjct: 714 GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVS 752
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 35.8 bits (81), Expect = 0.015
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 8 PTQPTYPVQPPGNPV-YPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
P PV P PV P T+ PQ PP+ PP L P+F P P P
Sbjct: 642 PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFG---P 698
Query: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVG---PIYPPGS 102
G P + G +P + P G PI PP S
Sbjct: 699 GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVS 737
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 35.8 bits (81), Expect = 0.015
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 8 PTQPTYPVQPPGNPV-YPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
P PV P PV P T+ PQ PP+ PP L P+F P P P
Sbjct: 657 PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFG---P 713
Query: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVG---PIYPPGS 102
G P + G +P + P G PI PP S
Sbjct: 714 GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVS 752
>gi|116256340 SEC31 homolog A isoform 3 [Homo sapiens]
Length = 1205
Score = 35.8 bits (81), Expect = 0.015
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 10 QPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAAT----VPTMSAAF 65
+P PV PP + YP T ++ A YT Y+ ++ S AT P+ A+F
Sbjct: 894 RPQQPVAPPTSNAYPNTPYISSASSYTGQSQLYAAQHQASSPTSSPATSFPPPPSSGASF 953
Query: 66 PGASLYLPMAQSVAVGPLGSTIP 88
P + S P G+T P
Sbjct: 954 QHGGPGAPPSSSAYALPPGTTGP 976
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 35.4 bits (80), Expect = 0.019
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 10/122 (8%)
Query: 22 VYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASLYLPMAQSVAVG 81
+YP LHL P + P S+L +PS P G YLP A A G
Sbjct: 123 LYPSYLHLNHLEPPSSGSPLLSQLGQPSIFDTQKGQGP------GGDGFYLPTAG--APG 174
Query: 82 PLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPVKEDQDHDREQGEED 141
L S P A P G + G+ D A+ AG G P + R +GEE
Sbjct: 175 SLHSHAPSARTPGGG-HSSGAPAKGSSSRDGPAKERAG-RGGEPPPLFGKKDPRARGEEA 232
Query: 142 NG 143
+G
Sbjct: 233 SG 234
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.4 bits (80), Expect = 0.019
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPY---TDAPPAYSELYRPSFVHPGAATVPTMSA 63
YP +P P +PP P P LP APP T A PA + + P +VP
Sbjct: 2030 YPLRPQTP-EPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAPAQPSVPLTQL 2088
Query: 64 AFP-GASLYLP-MAQSVAVGPLGSTIPMAYYPVGPI 97
+ P ++ P M Q++ + L + +P PV P+
Sbjct: 2089 SMPMELPIFSPLMMQTMPLQTLPAQLPPQLGPVEPL 2124
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 35.4 bits (80), Expect = 0.019
Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 11/100 (11%)
Query: 4 KGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSF---VHPGAATVPT 60
+G P P P PPG P P +H P +P Y++ F V P
Sbjct: 538 QGGPPPPPPPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEIVVRPTGQLAEK 597
Query: 61 MSAAFPG-ASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYP 99
+ FPG PM +GP G PM GP++P
Sbjct: 598 LGVRFPGPGGPPGPMGPGPNMGPPG---PMG----GPMHP 630
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.0 bits (79), Expect = 0.025
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 12/105 (11%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLP-------QAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
PT PP + P+T P QAPP + APP E P P
Sbjct: 170 PTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPP---ETTAAPPTPPATTPAPP 226
Query: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVL 105
S+A P + P + PL S+ P V P P +T L
Sbjct: 227 SSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP--TPSATTL 269
Score = 29.6 bits (65), Expect = 1.1
Identities = 25/102 (24%), Positives = 36/102 (35%), Gaps = 9/102 (8%)
Query: 8 PTQPTYPVQPPGNPVYPQTLHLPQAP------PYTDAPPAYSELYRPSFVHPGAATVPTM 61
PT P PP + P+T P P P + + P + P+ P A T+
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPT---PSATTLDPS 272
Query: 62 SAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGST 103
SA+ P + P S S+ PI P S+
Sbjct: 273 SASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSS 314
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,087,380
Number of Sequences: 37866
Number of extensions: 446290
Number of successful extensions: 2725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 2230
Number of HSP's gapped (non-prelim): 678
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.